CN189760

Overview
NameCN189760
Unique NameCN189760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189760 vs. ExPASy Swiss-Prot
Match: PMA4_NICPL (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.294e-65
Identity = 124/173 (71.68%), Postives = 133/173 (76.88%), Query Frame = 3
Query:  162 KAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGDGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 680
            KAISLEEIKNETVDLE+IPIEEVFEQLKCTREGLS+ EGA+RLQIFGPN              GFMWNPLSWVME          NGDGKPPDWQDF+GI+CLLVINSTISFIEE               PKTK+LRDG+WSE+EAAILVPGDIIS+KLGDIIPADARLLEGD
Sbjct:    3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKILKFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGD 175          
BLAST of CN189760 vs. ExPASy Swiss-Prot
Match: PMA2_ARATH (ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.205e-61
Identity = 116/170 (68.24%), Postives = 129/170 (75.88%), Query Frame = 3
Query:  171 SLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGDGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 680
            SLE+IKNETVDLE+IPIEEVF+QLKC+REGL++ EG +R+QIFGPN              GFMWNPLSWVME          NGDG+PPDWQDFVGI+CLLVINSTISFIEE               PKTK+LRDGKWSE+EAAILVPGDI+SIKLGDIIPADARLLEGD
Sbjct:    3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGD 172          
BLAST of CN189760 vs. ExPASy Swiss-Prot
Match: PMA3_ARATH (ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 4.159e-60
Identity = 116/172 (67.44%), Postives = 125/172 (72.67%), Query Frame = 3
Query:  165 AISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGDGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 680
            A  LE+I NE VDLE+IPIEEVF+QLKC+REGLS  EG NRLQIFGPN              GFMWNPLSWVME          NG GKPPDWQDFVGIVCLLVINSTISF+EE               PKTK+LRDGKWSE+EA+ILVPGDI+SIKLGDIIPADARLLEGD
Sbjct:    2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGD 173          
BLAST of CN189760 vs. ExPASy Swiss-Prot
Match: PMA1_ARATH (ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3)

HSP 1 Score: 230.335 bits (586), Expect = 7.094e-60
Identity = 114/169 (67.46%), Postives = 126/169 (74.56%), Query Frame = 3
Query:  174 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGDGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 680
            LE+IKNETVDLE+IPIEEVF+QLKCTREGL++ EG +R+ IFGPN              GFMWNPLSWVME          NGD +PPDWQDFVGI+CLLVINSTISFIEE               PKTK+LRDGKWSE+EAAILVPGDI+SIKLGDIIPADARLLEGD
Sbjct:    4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGD 172          
BLAST of CN189760 vs. ExPASy Swiss-Prot
Match: PMA1_ORYSJ (Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.981e-58
Identity = 113/169 (66.86%), Postives = 122/169 (72.19%), Query Frame = 3
Query:  174 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGDGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 680
            LEEIKNE VDLE IPIEEVFEQLKCTREGLSS EG  R+++FGPN              GFMWNPLSWVME          NG GKPPDW+DFVGI+ LLVINSTISFIEE               PKTK+LRDG+W E+EAAILVPGDIISIKLGDI+PADARLLEGD
Sbjct:    4 LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGD 172          
BLAST of CN189760 vs. ExPASy Swiss-Prot
Match: PMA6_ARATH (ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.133e-57
Identity = 110/171 (64.33%), Postives = 123/171 (71.93%), Query Frame = 3
Query:  168 ISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGDGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 680
            IS +EIK E VDLE+IP++EVF+QLKC+REGLSS EG NRLQIFG N              GFMWNPLSWVME          NG G+PPDWQDFVGI CLL+INSTISFIEE               PKTK+LRDG+W E+EAAILVPGD+ISIKLGDI+PADARLLEGD
Sbjct:    5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGD 175          
BLAST of CN189760 vs. ExPASy Swiss-Prot
Match: PMA1_WHEAT (Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 7.342e-57
Identity = 110/169 (65.09%), Postives = 122/169 (72.19%), Query Frame = 3
Query:  174 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGDGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 680
            LEEI+NE VDLE IPIEEVFEQLKCTR+GL+S EGA R++IFG N              GFMWNPLSWVME          NG GKPPDWQDFVGI+ LLVINSTISFIEE               PKTK+LRDG+W E+EA+ILVPGDI+SIKLGDI+PADARLLEGD
Sbjct:    4 LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGD 172          
BLAST of CN189760 vs. ExPASy Swiss-Prot
Match: PMA9_ARATH (ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 2.790e-56
Identity = 109/175 (62.29%), Postives = 123/175 (70.29%), Query Frame = 3
Query:  156 GDKAISLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGDGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 680
            G+K  S ++IKNE +DLE+IPIEEV  QL+CTREGL+S EG  RL+IFGPN              GFMWNPLSWVME          NG G+PPDWQDFVGI  LL+INSTISFIEE               PKTK+LRDGKWSE+EAAILVPGDIISIKLGDI+PAD RLL+GD
Sbjct:    3 GNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGD 177          
BLAST of CN189760 vs. ExPASy Swiss-Prot
Match: PMA8_ARATH (ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.060e-55
Identity = 108/170 (63.53%), Postives = 121/170 (71.18%), Query Frame = 3
Query:  171 SLEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGDGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 680
            S +EIK E VDLERIP+EEVFEQLKC++EGLSS EGA RL+IFG N              GFMWNPLSWVME          NG GK PDWQDF+GI+ LL+INSTISFIEE               PKTK+LRDGKW E+EA+ILVPGD+ISIKLGDI+PADARLLEGD
Sbjct:    6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAAALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGD 175          
BLAST of CN189760 vs. ExPASy Swiss-Prot
Match: PMA5_ARATH (ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=2 SV=3)

HSP 1 Score: 214.542 bits (545), Expect = 4.028e-55
Identity = 104/169 (61.54%), Postives = 123/169 (72.78%), Query Frame = 3
Query:  174 LEEIKNETVDLERIPIEEVFEQLKCTREGLSSTEGANRLQIFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGDGKPPDWQDFVGIVCLLVINSTISFIEEXXXXXXXXXXXXXXXPKTKLLRDGKWSEEEAAILVPGDIISIKLGDIIPADARLLEGD 680
            L+ IKNE+VDL RIP+EEVFE+LKCT++GL++ E ++RL +FGPN              GFMWNPLSWVME          NG G+PPDWQDFVGIVCLL+INSTISFIEE               PKTK+LRD +WSE+EA+ILVPGD+ISIKLGDIIPADARLL+GD
Sbjct:    4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLGFMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGD 172          
The following BLAST results are available for this feature:
BLAST of CN189760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
PMA4_NICPL4.294e-6571.68Plasma membrane ATPase 4 OS=Nicotiana plumbaginifo... [more]
PMA2_ARATH2.205e-6168.24ATPase 2, plasma membrane-type OS=Arabidopsis thal... [more]
PMA3_ARATH4.159e-6067.44ATPase 3, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ARATH7.094e-6067.46ATPase 1, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ORYSJ2.981e-5866.86Plasma membrane ATPase OS=Oryza sativa subsp. japo... [more]
PMA6_ARATH1.133e-5764.33ATPase 6, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_WHEAT7.342e-5765.09Plasma membrane ATPase OS=Triticum aestivum GN=ha1... [more]
PMA9_ARATH2.790e-5662.29ATPase 9, plasma membrane-type OS=Arabidopsis thal... [more]
PMA8_ARATH1.060e-5563.53ATPase 8, plasma membrane-type OS=Arabidopsis thal... [more]
PMA5_ARATH4.028e-5561.54ATPase 5, plasma membrane-type OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002G01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189760 ID=CN189760; Name=CN189760; organism=Citrus sinensis; type=EST; length=682bp
GAGCGCCTTCTTCTTCTTCTTCTTGGGATACATAACAATCTCATTCAATG
TTCTTCACTCCCTTTTCTTCTTGATCCTTGAAGAACAAAAAAAAATAAGA
ATAAAAGAGCACACTCTATTAATTTTTCATTCAAAGTTGAGTTTGAAAAG
ATATGGGTGACAAGGCTATTAGCCTTGAAGAGATCAAGAACGAGACCGTC
GATTTGGAACGGATCCCTATCGAGGAAGTGTTTGAGCAGCTGAAATGTAC
GCGAGAGGGTTTAAGTTCCACGGAAGGAGCCAACAGGCTTCAAATCTTTG
GCCCCAACAAGCTAGAAGAGAAAAAGGAAAGCAAAATCCTCAAGTTTTTG
GGGTTCATGTGGAATCCACTCTCATGGGTCATGGAGGCAGCTGCTGTCAT
GGCCATTGCGTTGGCTAATGGTGACGGGAAGCCCCCGGATTGGCAAGACT
TTGTTGGTATTGTTTGCTTGTTAGTGATCAACTCCACTATCAGTTTTATT
GAAGAAAACAATGCTGGTAATGCTGCTGCTGCTCTTATGGCTGGTCTCGC
TCCTAAGACTAAGTTGCTTAGGGATGGTAAATGGAGTGAGGAAGAAGCGG
CAATTCTGGTTCCAGGAGATATCATTAGCATCAAATTGGGAGACATCATC
CCTGCTGATGCTCGTCTTCTTGAGGGTGATCC
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