CN189757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189757 vs. ExPASy Swiss-Prot
Match: NPL41_ARATH (NPL4-like protein 1 OS=Arabidopsis thaliana GN=At3g63000 PE=1 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 4.079e-86 Identity = 154/212 (72.64%), Postives = 188/212 (88.68%), Query Frame = 2 Query: 122 LLRIRSRDGLERVTVDGAHITVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVRG-PSFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNETLAFAVKRGGFMYGTVLEDKRVEVNFIYEPPQQGTEEVLYILRDEEEEKLVDAIAAGLGMKKVGFI 754 +LR+RSRDGLERV+VDG HITV++LKT+IQ QL+IP+ +QTLSTN+NLLLAKSPSD L FTDMA+P+ +SSLN++HGS+V+L+Y+GER +RG P+ PAGSFGRKMT++DLIA+QMRV RQE HC+SVSFDRDCA+AFQ +VNE+LAFAVKRGGFMYG V ED +VEVNFIYEPPQQG E+ L ++RD EEEK VDAIA GLGM++VGFI Sbjct: 3 MLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGSMVYLAYEGERTIRGGPAVTPAGSFGRKMTVEDLIARQMRVGRQEKAHCDSVSFDRDCANAFQHFVNESLAFAVKRGGFMYGNVSEDGQVEVNFIYEPPQQGMEDNLILMRDSEEEKRVDAIALGLGMRRVGFI 214
BLAST of CN189757 vs. ExPASy Swiss-Prot
Match: NPL42_ARATH (NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2g47970 PE=1 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 7.693e-85 Identity = 153/213 (71.83%), Postives = 187/213 (87.79%), Query Frame = 2 Query: 119 MLLRIRSRDGLERVTVDGAHITVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVRG-PSFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNETLAFAVKRGGFMYGTVLEDKRVEVNFIYEPPQQGTEEVLYILRDEEEEKLVDAIAAGLGMKKVGFI 754 M+LRIRSRDGLERVT +GAHITV++LKT+I QL+IP+ QTLSTN++LLLAK+P+DLL FTD+ +P+ PLSSLN+ HGS+++L+YDGER++ G P PAGSFGRKMT+DDLIA+QMRVTRQE HC+SVSFDRD A+AFQ YVNE+LAFAVKRGGFMYGTV E+ +VEV+FIYEPPQQGTE L ++RD +EEK VDAIA GLGM++VGFI Sbjct: 2 MMLRIRSRDGLERVTAEGAHITVSQLKTLIADQLQIPLHKQTLSTNRDLLLAKTPADLLAFTDLTDPNLPLSSLNLGHGSMLYLAYDGERSIPGAPPVTPAGSFGRKMTVDDLIARQMRVTRQETSHCDSVSFDRDAANAFQHYVNESLAFAVKRGGFMYGTVTEEGQVEVDFIYEPPQQGTEANLILMRDADEEKRVDAIAMGLGMRRVGFI 214
BLAST of CN189757 vs. ExPASy Swiss-Prot
Match: NPL4_ORYSJ (NPL4-like protein OS=Oryza sativa subsp. japonica GN=Os01g0377700 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.377e-54 Identity = 119/218 (54.59%), Postives = 155/218 (71.10%), Query Frame = 2 Query: 119 MLLRIRSRDGLERVTV-DGAHITVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVRGP----SFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNETLAFAVKRGGFMYGTVLED-KRVEVNFIYEPPQQGTEEVLYILRDEEEEKLVDAIAAGLGMKKVGFI 754 M+LRIRSRDG +R+TV D A TV +L+ +I +++ +PV Q LS + LLL S S L +A+P PLSSL +S+GS V+LSY + P + + AGSFG+KMTMDDLIA+Q+RVTRQE P C + SFDRD A+AFQ +V E+LAFA KR GF+YG V D K V V+FIYEPPQ GTE+V+ ++RD +EE VDAIA GLGM++VG + Sbjct: 1 MILRIRSRDGTDRITVPDPAAATVGDLQRLIAARVTVPVPLQRLSLDPALLLPSSASAAL----LADPAAPLSSLRLSNGSFVYLSYPPDARSSQPPPPKALSAAGSFGKKMTMDDLIARQIRVTRQEAPLCAAASFDRDSANAFQLHVAESLAFATKRAGFLYGRVDADTKEVFVDFIYEPPQVGTEDVVQLMRDAQEEARVDAIAHGLGMRRVGLV 214 The following BLAST results are available for this feature:
BLAST of CN189757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189757 ID=CN189757; Name=CN189757; organism=Citrus sinensis; type=EST; length=755bpback to top |