CN189754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189754 vs. ExPASy Swiss-Prot
Match: PFD6_BOVIN (Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.236e-23 Identity = 55/121 (45.45%), Postives = 84/121 (69.42%), Query Frame = -3 Query: 253 LQRELETKVNDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 615 +Q++L+ +V +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR ++ L+DLE++ ++E + ++QQ Q QA KA A Sbjct: 5 IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLEQQSEQQRETLAQLQQEFQRAQAAKAGA 125
BLAST of CN189754 vs. ExPASy Swiss-Prot
Match: PFD6_HUMAN (Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.814e-23 Identity = 55/121 (45.45%), Postives = 83/121 (68.60%), Query Frame = -3 Query: 253 LQRELETKVNDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 615 +Q++L+ +V +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR ++ L+DLE + ++E + ++QQ Q QA KA A Sbjct: 5 IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAGA 125
BLAST of CN189754 vs. ExPASy Swiss-Prot
Match: PFD6_CANFA (Prefoldin subunit 6 OS=Canis familiaris GN=PFDN6 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.814e-23 Identity = 55/121 (45.45%), Postives = 83/121 (68.60%), Query Frame = -3 Query: 253 LQRELETKVNDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 615 +Q++L+ +V +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR ++ L+DLE + ++E + ++QQ Q QA KA A Sbjct: 5 IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAGA 125
BLAST of CN189754 vs. ExPASy Swiss-Prot
Match: PFD6_MOUSE (Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23 Identity = 54/119 (45.38%), Postives = 82/119 (68.91%), Query Frame = -3 Query: 259 LQRELETKVNDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQAGKA 615 +Q++L+ +V +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPVLVKQ+L EA A V KR++YI+AE+KR ++ L+DLE + ++E + ++QQ Q QA KA Sbjct: 5 IQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKA 123
BLAST of CN189754 vs. ExPASy Swiss-Prot
Match: PFD6_CAEEL (Probable prefoldin subunit 6 OS=Caenorhabditis elegans GN=pfd-6 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.552e-16 Identity = 44/118 (37.29%), Postives = 74/118 (62.71%), Query Frame = -3 Query: 253 ELETKVNDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 606 + E +VN L L+KD K R++ ++L E++ V EL L+ + VYKLIG VLV+QDL EA + V KR+E+I +E KR++A++ D+ +K +++ + +Q+ Q + A+A Sbjct: 6 KFEEEVNKLRTLEKDREKYFTSRQEMEMRLTESKNVKAELDLMESDSKVYKLIGAVLVRQDLEEARSTVEKRLEFIDSETKRVEASISDISKKCTEQRDKVMNMQKSFQMMAQAAAQA 123
BLAST of CN189754 vs. ExPASy Swiss-Prot
Match: PFD6_DROME (Probable prefoldin subunit 6 OS=Drosophila melanogaster GN=CG7770 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.027e-16 Identity = 48/112 (42.86%), Postives = 66/112 (58.93%), Query Frame = -3 Query: 280 LQRELETKVNDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQ 615 L ++++ ++ LQK K + R QL EN+ VL EL LL VYKL GPVLVKQ+L E+ NV KRIEYIS ELK L+++E+ +E++ K QQ+ Q Sbjct: 8 LYKKMQAEIESYQNLQKSCLKMVKQRAVLESQLNENKCVLDELNLLGPDNKVYKLFGPVLVKQELEESRQNVGKRIEYISKELKSSTDALENMEKDMLKHRESVAKYQQQCQ 119
BLAST of CN189754 vs. ExPASy Swiss-Prot
Match: PFD6_CAEBR (Probable prefoldin subunit 6 OS=Caenorhabditis briggsae GN=pfd-6 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.458e-16 Identity = 40/111 (36.04%), Postives = 74/111 (66.67%), Query Frame = -3 Query: 274 ELETKVNDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSL 606 + E +++ L L+KD K R++ ++L E++ V EL L++ + VYKL+GPVLV+QDL EA + V KR+E+I +E+KR++A++ D+ +K +++ + +Q+ Q + Sbjct: 6 KFEEEISKLKTLEKDREKYFSSRQEMEMRLTESKNVKAELDLMDSDSKVYKLMGPVLVRQDLEEARSTVEKRLEFIESEIKRVEASITDVNKKSIEQRDKVMNMQKAFQMM 116
BLAST of CN189754 vs. ExPASy Swiss-Prot
Match: PFD6_DICDI (Probable prefoldin subunit 6 OS=Dictyostelium discoideum GN=pfdn6 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 41/119 (34.45%), Postives = 66/119 (55.46%), Query Frame = -3 Query: 268 LRELQRELETKVNDLSKLQKDIGKNHQVRKKYTIQLGENELVLKELGLLNEGANVYKLIGPVLVKQDLAEANANVRKRIEYISAELKRLDATLQDLEEKQNSKKEAIFKVQQRIQSLQA 624 ++++Q +L + + ++ K R K QL ENE+V KE LL A +YKL GPVL KQ EA + R++ I+ LK ++ +D+E+K ++ IF+ Q +I+SL A Sbjct: 15 IQQIQDQLIKARDAFQVHETELQKLSASRSKLLTQLNENEMVKKEFDLLESEAKIYKLNGPVLFKQTKEEAENTITSRLDIINNNLKTIETNFKDIEKKAMEQRNKIFEYQNKIRSLTA 133 The following BLAST results are available for this feature:
BLAST of CN189754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189754 ID=CN189754; Name=CN189754; organism=Citrus sinensis; type=EST; length=659bpback to top |