DR908865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908865 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 5.403e-38 Identity = 76/80 (95.00%), Postives = 77/80 (96.25%), Query Frame = 3 Query: 3 ARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 242 AR LQFVTGTSKVPLEGFKALQGISGPQ+ QIHKAYGAPERLPSAHTCFNQLDLPEY SKEQLQERLLLAIHEASEGFGF Sbjct: 3601 ARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGAPERLPSAHTCFNQLDLPEYQSKEQLQERLLLAIHEASEGFGF 3680
BLAST of DR908865 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 5.974e-37 Identity = 73/80 (91.25%), Postives = 77/80 (96.25%), Query Frame = 3 Query: 3 ARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 242 AR LQFVTGTSKVPLEGFKALQGISGPQ+ QIHKAYG+PERLPSAHTCFNQLDLPEY SKEQ+QERLLLAIHEA+EGFGF Sbjct: 3578 ARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGSPERLPSAHTCFNQLDLPEYQSKEQVQERLLLAIHEANEGFGF 3657
BLAST of DR908865 vs. ExPASy Swiss-Prot
Match: PTR1_SCHPO (E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe GN=ptr1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.249e-26 Identity = 56/80 (70.00%), Postives = 66/80 (82.50%), Query Frame = 3 Query: 3 ARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 242 A+LLQF TGTSKVPL GFK L+G+SG Q+F IHK+YG+ RLP +HTCFNQLDLPEY + EQL+ LL AI+E SEGFGF Sbjct: 3147 AKLLQFATGTSKVPLNGFKELEGMSGFQRFNIHKSYGSLNRLPQSHTCFNQLDLPEYDTYEQLRSMLLTAINEGSEGFGF 3226
BLAST of DR908865 vs. ExPASy Swiss-Prot
Match: HUWE1_RAT (E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus GN=Huwe1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 8.947e-25 Identity = 55/79 (69.62%), Postives = 65/79 (82.28%), Query Frame = 3 Query: 3 ARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 239 A+ LQFVTGTSKVPL+GF AL+G++G QKFQIH+ + +RLPSAHTCFNQLDLP Y S E+L+ LLLAI E SEGFG Sbjct: 242 AKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFG 320
BLAST of DR908865 vs. ExPASy Swiss-Prot
Match: HUWE1_MOUSE (E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus GN=Huwe1 PE=1 SV=4) HSP 1 Score: 113.235 bits (282), Expect = 8.947e-25 Identity = 55/79 (69.62%), Postives = 65/79 (82.28%), Query Frame = 3 Query: 3 ARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 239 A+ LQFVTGTSKVPL+GF AL+G++G QKFQIH+ + +RLPSAHTCFNQLDLP Y S E+L+ LLLAI E SEGFG Sbjct: 4297 AKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFG 4375
BLAST of DR908865 vs. ExPASy Swiss-Prot
Match: HUWE1_HUMAN (E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 8.947e-25 Identity = 55/79 (69.62%), Postives = 65/79 (82.28%), Query Frame = 3 Query: 3 ARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 239 A+ LQFVTGTSKVPL+GF AL+G++G QKFQIH+ + +RLPSAHTCFNQLDLP Y S E+L+ LLLAI E SEGFG Sbjct: 4294 AKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFG 4372
BLAST of DR908865 vs. ExPASy Swiss-Prot
Match: TOM1_ASHGO (Probable E3 ubiquitin-protein ligase TOM1 OS=Ashbya gossypii GN=TOM1 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.169e-24 Identity = 54/79 (68.35%), Postives = 63/79 (79.75%), Query Frame = 3 Query: 3 ARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 239 A+LLQFVTGTSKVPL GFK L G++G KF IH+ YG+ +RLPS+HTCFNQLDLP Y S E L+ LLLAI+E EGFG Sbjct: 3178 AKLLQFVTGTSKVPLNGFKELSGVNGISKFSIHRDYGSIDRLPSSHTCFNQLDLPAYDSYETLRGSLLLAINEGHEGFG 3256
BLAST of DR908865 vs. ExPASy Swiss-Prot
Match: TOM1_YEAST (E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces cerevisiae GN=TOM1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 5.800e-24 Identity = 53/79 (67.09%), Postives = 63/79 (79.75%), Query Frame = 3 Query: 3 ARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 239 A+LLQFVTGTSKVPL GFK L G++G KF IH+ +G+ ERLPS+HTCFNQL+LP Y S E L+ LLLAI+E EGFG Sbjct: 3188 AKLLQFVTGTSKVPLNGFKELSGVNGVCKFSIHRDFGSSERLPSSHTCFNQLNLPPYESYETLRGSLLLAINEGHEGFG 3266
BLAST of DR908865 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.292e-23 Identity = 51/80 (63.75%), Postives = 64/80 (80.00%), Query Frame = 3 Query: 3 ARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGF 242 A+LLQFVTGTSKVPL GFK L+G++G +F IH+ YG+ +RLPS+HTCFNQLDLPEY + E L+ +LL AI S+ FGF Sbjct: 3946 AKLLQFVTGTSKVPLNGFKELEGMNGVSRFNIHRDYGSKDRLPSSHTCFNQLDLPEYENYETLRSQLLKAITAGSDYFGF 4025
BLAST of DR908865 vs. ExPASy Swiss-Prot
Match: PUB3_SCHPO (E3 ubiquitin-protein ligase pub3 OS=Schizosaccharomyces pombe GN=pub3 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.636e-20 Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 3 Query: 3 ARLLQFVTGTSKVPLEGFKALQGISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFG 239 ++LLQF TGTS++P+ GF+ LQG GP+KF I KA G P++LP AHTCFN+LDLP+Y SK+ L E+L LA+ E + GFG Sbjct: 708 SKLLQFATGTSRIPVNGFRDLQGSDGPRKFTIEKA-GTPDQLPVAHTCFNRLDLPDYPSKDTLHEKLSLAV-ENTVGFG 784 The following BLAST results are available for this feature:
BLAST of DR908865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908865 ID=DR908865; Name=DR908865; organism=Citrus sinensis; type=EST; length=570bpback to top |