DR908861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.384e-40 Identity = 81/108 (75.00%), Postives = 98/108 (90.74%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 325 +S+Q+ A++K L+G+ YCVR++AEALE+IPYTLAENAGL+P++IVTELRN+HAQGEINSGINVRKG ITNIL+ENVVQPLLVSTSA+TLA E V M+LKIDDI T R Sbjct: 426 VSQQVTAFSKTLTGITSYCVRAYAEALEIIPYTLAENAGLHPISIVTELRNKHAQGEINSGINVRKGAITNILQENVVQPLLVSTSALTLATETVVMLLKIDDIATAR 533
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 2.270e-36 Identity = 76/108 (70.37%), Postives = 91/108 (84.26%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 325 L+ +L +++ LSGME YC+R+FA+A+EVIP TLAENAGLNP++ VTELRNRHAQGE +GINVRKG I+NILEE VVQPLLVS SA+TLA E VR ILKIDD+V R Sbjct: 435 LALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEQVVQPLLVSVSALTLATETVRSILKIDDVVNTR 542
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.270e-36 Identity = 78/102 (76.47%), Postives = 88/102 (86.27%), Query Frame = 2 Query: 11 QLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIV 316 QL A A+ L G++ YC R+FA ALEVIP TLAENAGLNP+A VTELRNRHAQGE N+GINVRKG IT+IL ENVVQPLLVSTS+ITLA+E VR ILKIDDI+ Sbjct: 428 QLAAHAQTLEGVDAYCFRAFANALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGAITDILAENVVQPLLVSTSSITLASETVRSILKIDDII 529
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 2.965e-36 Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 325 L+ +L +++ LSGME YCVR+FA+A+EVIP TLAENAGLNP++ VTELRNRHAQGE +GINVRKG I+NILEE VVQPLLVS SA+TLA E VR ILKIDD+V R Sbjct: 432 LALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVNTR 539
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 2.965e-36 Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 325 L+ +L +++ LSGME YCVR+FA+A+EVIP TLAENAGLNP++ VTELRNRHAQGE +GINVRKG I+NILEE VVQPLLVS SA+TLA E VR ILKIDD+V R Sbjct: 432 LALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVNTR 539
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 3.872e-36 Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 325 L+ +L +++ LSGME YCVR+FA+A+EVIP TLAENAGLNP++ VTELRNRHAQGE +GINVRKG I+NILEE VVQPLLVS SA+TLA E VR ILKIDD+V R Sbjct: 432 LALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 539
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 150.984 bits (380), Expect = 3.872e-36 Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 325 L+ +L +++ LSGME YCVR+FA+A+EVIP TLAENAGLNP++ VTELRNRHAQGE +GINVRKG I+NILEE VVQPLLVS SA+TLA E VR ILKIDD+V R Sbjct: 432 LALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 539
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.125e-34 Identity = 73/108 (67.59%), Postives = 90/108 (83.33%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 325 L+ +L +++ L GME YCVR++++ALEVIP TLAENAGLNP++ VTELRNRHAQG+ +GINVRKG I+NI+EE VVQPLLVS SA+TLA E VR ILKIDD+V R Sbjct: 429 LAVRLAEYSRTLGGMEAYCVRAYSDALEVIPSTLAENAGLNPISTVTELRNRHAQGDKMAGINVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDVVNAR 536
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.199e-31 Identity = 67/100 (67.00%), Postives = 81/100 (81.00%), Query Frame = 2 Query: 26 AKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 325 A+ L G E C+R+F+EALE+IP TLAENAGLN + +VTELR+RHA GE +GINVRKG +TNILEENV+QPLLV+ SAI LAAE +MI+KIDDI R Sbjct: 428 ARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKTAGINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDITLAR 527
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.688e-29 Identity = 63/97 (64.95%), Postives = 79/97 (81.44%), Query Frame = 2 Query: 26 AKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIV 316 A+ G +YC R+FA+ALE+IPYTLAENAGL+P+ VTELRN HA G + G+NVRKG +T+++EE+VVQPLLV+ SAI A+ECVR ILKIDDIV Sbjct: 440 AQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNHANGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIV 536 The following BLAST results are available for this feature:
BLAST of DR908861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908861 ID=DR908861; Name=DR908861; organism=Citrus sinensis; type=EST; length=570bpback to top |