CN189741

Overview
NameCN189741
Unique NameCN189741
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN189741 vs. ExPASy Swiss-Prot
Match: PWD_ARATH (Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana GN=GWD3 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.866e-46
Identity = 88/101 (87.13%), Postives = 95/101 (94.06%), Query Frame = 1 
Query:  292 EVLVIRKIHPCLPSFKAEFTASVPLTRIRDIAHRNDIPHDLKLEIKHTIQNKLHRNAGPEDLVATEAMLAKITKNPGEYSESFVEQFKMFHSELKDFFNAG 594
            EVLV RKIHPCLPSFKAEFTA+VPLTRIRDIAHRNDIPHDLK EIKHTIQNKLHRNAGPEDL+ATEAML +IT+ PG+YS  FVEQFK+FH+ELKDFFNAG
Sbjct:  339 EVLVARKIHPCLPSFKAEFTAAVPLTRIRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLIATEAMLQRITETPGKYSGDFVEQFKIFHNELKDFFNAG 439
[Close]
BLAST of CN189741 vs. ExPASy Swiss-Prot
Match: PWD_ORYSJ (Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica GN=GWD3 PE=3 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.437e-46
Identity = 89/101 (88.12%), Postives = 96/101 (95.05%), Query Frame = 1 
Query:  292 EVLVIRKIHPCLPSFKAEFTASVPLTRIRDIAHRNDIPHDLKLEIKHTIQNKLHRNAGPEDLVATEAMLAKITKNPGEYSESFVEQFKMFHSELKDFFNAG 594
            +VLVIRKIHP LPSFK+EFTASVPLTRIRDIAHRNDIPHDLK EIKHTIQNKLHRNAGPEDL+ATE MLA+ITK PGEYSE+FVEQF +F+SELKDFFNAG
Sbjct:  351 DVLVIRKIHPFLPSFKSEFTASVPLTRIRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLIATEVMLARITKTPGEYSETFVEQFTIFYSELKDFFNAG 451
The following BLAST results are available for this feature:
BLAST of CN189741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PWD_ARATH1.866e-4687.13Phosphoglucan, water dikinase, chloroplastic OS=Ar... [more]
PWD_ORYSJ2.437e-4688.12Phosphoglucan, water dikinase, chloroplastic OS=Or... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0002F13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002F13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189741 ID=CN189741; Name=CN189741; organism=Citrus sinensis; type=EST; length=758bp
GAGGCTTGTGTTCATAATAGTAGATTCCATGGGCCTAAAAAACAAAATGA
AGGAGAGAATTATGAAATGTCCAGATGTAAAGACAAGAAAACGTGAACAG
AGGCATTAATTACAATATCTTAATTGTAACTTCACATATTTTGTTATCTT
GCACCTGTAATAATAAAGATTCATTCATGCTTTTCATAGAGATTGAAATA
GAGGGATTTTTCTTTCATGCTTTCGTTTATGTTTTGATAACCTATTGTGT
CATTTTTTCTCTTCTTTACTATGTTTATTTATGATGTTTAGGAAGTTCTT
GTTATTCGAAAGATCCACCCATGTTTACCATCTTTTAAGGCTGAGTTTAC
TGCATCTGTTCCTCTAACTCGAATAAGAGATATTGCTCACCGGAATGATA
TCCCCCATGACCTGAAGCTAGAAATCAAGCATACAATACAGAACAAACTT
CATCGAAATGCTGGGCCAGAAGACTTAGTTGCTACAGAAGCAATGCTTGC
AAAAATTACCAAGAACCCAGGAGAATATAGTGAATCATTTGTGGAGCAAT
TCAAGATGTTCCATAGTGAACTCAAAGACTTTTTCAATGCTGGAAGGTCC
GATTTATGACATTTTAAAACTTGTTTCATATTAGCGTTTTATCTTTTTGT
CTTTTTTTGTTATTATTGTAGATCAATCTTCTCTCATTTTTATTATTTAA
ATGTTTTTTTCCCACTAATATGGGTGGGTAAATTTTTCGGAAGTCAGTTT
CAGGTAAT
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