CN189734

Overview
NameCN189734
Unique NameCN189734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189734 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.289e-44
Identity = 86/200 (43.00%), Postives = 131/200 (65.50%), Query Frame = -3
Query:  145 EIEEDMAKQGRSHCVRYAKEENQKVIGAYSVQAKWFSEGYVPTIEEYMPIALTSCAYTFVITNSFLGMGDFATKEVFEWISNNPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH-SYLIKDQIASVLGDHV 741
            E+E+ +A QGR + V YAK+   +++ AY ++AKW  + Y PT EE+   AL +  Y  +   +F+GMG+  T E F+W +++PK++KA+++ICR MDD+  H+F  +R    SAIECY KQ+GV+ +EA   F + + ++WKD+NEE  +KPT +  P+L   LNLAR +D +Y+E DGYTH     K  I S+L D +
Sbjct:  355 EMEQLLANQGRQYRVEYAKKAMIRLVQAYLLEAKWTHQNYKPTFEEFRDNALPTSGYAMLAITAFVGMGEVITPETFKWAASDPKIIKASTIICRFMDDIAEHKFNHRREDDCSAIECYMKQYGVTAQEAYNEFNKHIESSWKDVNEE-FLKPTEMPTPVLCRSLNLARVMDVLYREGDGYTHVGKAAKGGITSLLIDPI 553          
BLAST of CN189734 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.431e-43
Identity = 79/183 (43.17%), Postives = 124/183 (67.76%), Query Frame = -3
Query:  193 EIEEDMAKQGRSHCVRYAKEENQKVIGAYSVQAKWFSEGYVPTIEEYMPIALTSCAYTFVITNSFLGMGDFATKEVFEWISNNPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 741
            E+E+ +AK GR + V YAK    ++  +Y V+A+W  + Y P+ EE+   AL +C Y  +   SF+GMGD  T E F+W +N+PK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GV+ +EA  +F + V +AWKD+N+E  +KPT +   +L   LNLAR +D +Y+E DGYT+
Sbjct:  354 EMEQLVAKHGRQYRVEYAKNAMIRLAQSYLVEARWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNKE-FLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of CN189734 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 4.146e-43
Identity = 84/200 (42.00%), Postives = 129/200 (64.50%), Query Frame = -3
Query:  142 EIEEDMAKQGRSHCVRYAKEENQKVIGAYSVQAKWFSEGYVPTIEEYMPIALTSCAYTFVITNSFLGMGDFATKEVFEWISNNPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTHSYLIKDQIASVLGDHVP 741
            +++E++ K+GRS C  + K+  QK    Y  +AKW  + Y+ T +EY   A+ S  Y  +I  +F+ M D A  + FEW+S++PK+  A+ +I R  DD+  +EFE KR HVA+ I+CY +Q GVSKE A+++    V++AWKD+N+EL M+P V   PLL  +LNL+R ID  Y+  D YT+  L+K+ I S+L + +P
Sbjct:  348 KLDEELEKEGRSGCGFHLKKSLQKTANGYMQEAKWLKKDYIATFDEYKENAILSSGYYALIAMTFVRMTDVAKLDAFEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATGIDCYMQQFGVSKERAVEVMGNIVSDAWKDLNQEL-MRPHVFPFPLLMRVLNLSRVIDVFYRYQDAYTNPKLLKEHIVSLLIETIP 546          
BLAST of CN189734 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.146e-43
Identity = 79/183 (43.17%), Postives = 123/183 (67.21%), Query Frame = -3
Query:  193 EIEEDMAKQGRSHCVRYAKEENQKVIGAYSVQAKWFSEGYVPTIEEYMPIALTSCAYTFVITNSFLGMGDFATKEVFEWISNNPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 741
            E+E+ +A+ GR + V YAK    ++  +Y V+A+W  + Y P+ EE+   AL +C Y  +   SF+GMGD  T E F+W +N+PK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GVS +EA  +F + V +AWKD+N+E   KPT +   +L   LNLAR +D +Y+E DGYT+
Sbjct:  354 EMEQLVAEHGRQYRVEYAKNAMIRLAQSYLVEARWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVSAQEAYDVFNKHVESAWKDVNQE-FQKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of CN189734 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.510e-42
Identity = 77/183 (42.08%), Postives = 123/183 (67.21%), Query Frame = -3
Query:  193 EIEEDMAKQGRSHCVRYAKEENQKVIGAYSVQAKWFSEGYVPTIEEYMPIALTSCAYTFVITNSFLGMGDFATKEVFEWISNNPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 741
            E+E+ +A+ GR + V YAK    ++  +Y V+A+W  + Y P+ EE+   AL +C Y  +   SF+GMGD  T E F+W +N+PK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GV+ +EA  +F + V +AWKD+N+   +KPT +   +L   LNLAR +D +Y+E DGYT+
Sbjct:  354 EMEQLVAEHGRQYRVEYAKNAMIRLAQSYLVEARWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAANDPKIIQASTIICRFMDDVTEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDVNQG-FLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of CN189734 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.819e-42
Identity = 77/183 (42.08%), Postives = 123/183 (67.21%), Query Frame = -3
Query:  193 EIEEDMAKQGRSHCVRYAKEENQKVIGAYSVQAKWFSEGYVPTIEEYMPIALTSCAYTFVITNSFLGMGDFATKEVFEWISNNPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 741
            E+ + +A+ GR + V YAK    ++  +Y V+AKW  + Y P+ EE+   AL +C Y  +   SF+GMGD  T E F+W +++PK+++A+++ICR MDD+  H+F+ +R    SAIECY +++GV+ +EA  +F + V +AWKD+N+E  +KPT +   +L   LNLAR +D +Y+E DGYT+
Sbjct:  354 EMVQLVAEHGRQYRVEYAKNAMIRLAQSYLVEAKWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAASDPKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQE-FLKPTEMPTEVLNRSLNLARVMDVLYREGDGYTY 535          
BLAST of CN189734 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.475e-40
Identity = 83/201 (41.29%), Postives = 132/201 (65.67%), Query Frame = -3
Query:  145 EIEEDMAKQGRSHCVRYAKEENQKVIGAYSVQAKWFSEGYVPTIEEYMPIALTSCAYTFVITNSFLGMGDFATKEVFEWISNNPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKED-DGYTH-SYLIKDQIASVLGDHV 741
            + E++++  GRSH V +A E  ++V+  Y+V++ WF EGY P + EY+  AL +  Y ++ T S+LGM   AT++ FEW+S NPK+++A+ +ICR++DD   +E E+ RG +A+ IEC  + +G+S +EA+  F+     AWKDINE L ++PT V+   L  ILNLAR ++  Y  + DGYTH   ++K  I ++L D +
Sbjct:  348 DYEKELSSAGRSHIVCHAIERMKEVVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYYLATTSYLGMKS-ATEQDFEWLSKNPKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGL-LRPTPVSTEFLTPILNLARIVEVTYIHNLDGYTHPEKVLKPHIINLLVDSI 546          
BLAST of CN189734 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.016e-38
Identity = 73/183 (39.89%), Postives = 110/183 (60.11%), Query Frame = -3
Query:  193 EIEEDMAKQGRSHCVRYAKEENQKVIGAYSVQAKWFSEGYVPTIEEYMPIALTSCAYTFVITNSFLGMGDFATKEVFEWISNNPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTH 741
            EIEE ++K G+ H V Y KE  ++ + +Y  +A+W  E Y+PTIEE+  ++  S  Y   +   F  MGD    + FEW+  NP +V A  ++CR MDD+  H+ EQ R HVAS IECY KQ   S+++A +   ++V +AWK+IN E M+    V   +   +LN +R++D +YK  D +TH
Sbjct:  346 EIEEILSKDGKQHHVNYIKETLKEAVQSYMTEARWAKEEYIPTIEEHTKVSYISIGYKLALVAGFACMGDVIADDSFEWVFTNPPLVNACCLLCRTMDDLGSHKGEQDRKHVASTIECYMKQFDASEQQAYESLNKKVEDAWKEINREFMITCKDVNIHVAMRVLNFSRSVDVLYKNKDHFTH 528          
BLAST of CN189734 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.440e-37
Identity = 74/199 (37.19%), Postives = 119/199 (59.80%), Query Frame = -3
Query:  145 EIEEDMAKQGRSHCVRYAKEENQKVIGAYSVQAKWFSEGYVPTIEEYMPIALTSCAYTFVITNSFLGMGDFATKEVFEWISNNPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYTHSYLIKDQIASVLGDHV 741
            E E+++  +G+S+ V+Y +E  Q+++  Y ++A W  EG +P+ ++Y+     +     V T SF+G+ +      F+W+  NPK+  A+    RL++D+  H  EQ+RGHVAS I+CY  QHGVSK+EA+K+ ++   + WK+INEE M +  V    L+  I+NLAR  D  YK  DGYT S  +K  +  +  D +
Sbjct:  402 EFEKELTAEGKSYSVKYGREAFQELVRGYYLEAVWRDEGKIPSFDDYLYNGSMTTGLPLVSTASFMGVQEITGLNEFQWLETNPKLSYASGAFIRLVNDLTSHVTEQQRGHVASCIDCYMNQHGVSKDEAVKILQKMATDCWKEINEECMRQSQVSVGHLM-RIVNLARLTDVSYKYGDGYTDSQQLKQFVKGLFVDPI 599          
BLAST of CN189734 vs. ExPASy Swiss-Prot
Match: AMS1_ARTAN (Amorpha-4,11-diene synthase OS=Artemisia annua GN=AMS1 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.767e-28
Identity = 64/193 (33.16%), Postives = 112/193 (58.03%), Query Frame = -3
Query:  178 EIEEDMAKQGRSHCVRYAKEENQKVIGAYSVQAKWFSEGYVPTIEEYMPIALTSCAYTFVITNSFLGMGDFATKEVFEWISNNPKVVKAASVICRLMDDMQGHEFEQKRGHVASAIECYTKQHGVSKEEAIKMFEEEVANAWKDINEELMMKPTVVARPLLGTILNLARAIDFIYKEDDGYT-----HSYLIK 741
            E+EE +AK+GR+      KE  ++ +    V+AKW +EG++PT EE+ P+ + +     + T  +LGM D  TKE  EW  + P + + + ++ R ++D+  H+ EQ+R H +S++E Y K++ V++E A  +  +EV + WKDIN E +     + RPLL  ++ L + ++  Y   D +T     + +LIK
Sbjct:  346 EMEEFLAKEGRTDLFNCGKEFVKEFVRNLMVEAKWANEGHIPTTEEHDPVVIITGGANLLTTTCYLGMSDIFTKESVEWAVSAPPLFRYSGILGRRLNDLMTHKAEQERKHSSSSLESYMKEYNVNEEYAQTLIYKEVEDVWKDINREYLTTKN-IPRPLLMAVIYLCQFLEVQYAGKDNFTRMGDEYKHLIK 537          
The following BLAST results are available for this feature:
BLAST of CN189734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
DCS3_GOSAR1.289e-4443.00(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
DCS2_GOSAR2.431e-4343.17(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
HUMS_ARATH4.146e-4342.00Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
DCS4_GOSAR4.146e-4343.17(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS1_GOSHI3.510e-4242.08(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
DCS1_GOSAR7.819e-4242.08(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
5EAS_TOBAC1.475e-4041.29Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
ECS1_ARTAN4.016e-3839.89Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
CASS_RICCO4.440e-3737.19Casbene synthase, chloroplastic OS=Ricinus communi... [more]
AMS1_ARTAN3.767e-2833.16Amorpha-4,11-diene synthase OS=Artemisia annua GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002F10_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189734 ID=CN189734; Name=CN189734; organism=Citrus sinensis; type=EST; length=743bp
TTTATCGAGGGAAATCTTTAAATACAATAAAAATATAAAATATTTATTAG
TACAGACCAATACGATACACCGTATTTCCTTCAAACACAAACCAAGGAAC
TGAAAATATTATTAATAGAAGTATAGAACTAGTCGTCAAAATGGAACGTG
GTCTCCTAGCACAGAAGCAATTTGATCTTTAATTAGGTAAGAATGCGTAT
AGCCGTCGTCCTCTTTGTAAATAAAATCAATTGCACGAGCAAGATTAAGA
ATCGTCCCGAGCAGTGGTCGGGCAACGACGGTTGGCTTCATCATCAACTC
CTCGTTAATATCTTTCCATGCATTTGCAACTTCTTCTTCAAACATTTTAA
TTGCCTCTTCCTTAGAGACACCATGCTGCTTCGTGTAACATTCAATAGCT
GACGCAACATGTCCTCTCTTCTGCTCAAACTCATGACCTTGCATGTCATC
CATGAGTCTGCAGATAACTGATGCTGCTTTTACAACCTTAGGGTTATTGG
AGATCCATTCAAAAACCTCTTTAGTTGCAAAATCACCCATGCCAAGGAAG
GAATTTGTTATGACGAATGTGTAAGCACAACTTGTTAGTGCAATAGGCAT
ATACTCCTCAATTGTTGGAACGTAACCTTCACTGAACCATTTGGCTTGAA
CAGAGTATGCTCCAATTACTTTTTGATTCTCCTCTTTTGCATAACGTACG
CAGTGTGATCTTCCTTGCTTGGCCATATCTTCCTCAATTTCAT
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