CN189730

Overview
NameCN189730
Unique NameCN189730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189730 vs. ExPASy Swiss-Prot
Match: SUT31_ARATH (Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.710e-27
Identity = 59/95 (62.11%), Postives = 78/95 (82.11%), Query Frame = -2
Query:  280 YVILDMGAVGNIDTSGISMLEEVKKTLDRRELKVVLANPGAEVTKKLDKSKFI-ENMGQEWIFLAVGEAVTACNFRLHTCEPNPEKAESEPWDNV 561
            Y+ILDM AVGNIDTSGISM+ E+KK +DRR LK+VL+NP  EV KKL +SKFI +++G+EW+FL VGEAV AC++ LHT +  P  +++EPW+NV
Sbjct:  565 YIILDMSAVGNIDTSGISMMVEIKKVIDRRALKLVLSNPKGEVVKKLTRSKFIGDHLGKEWMFLTVGEAVEACSYMLHTFKTEP-ASKNEPWNNV 658          
BLAST of CN189730 vs. ExPASy Swiss-Prot
Match: SUT32_ARATH (Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.226e-26
Identity = 57/82 (69.51%), Postives = 69/82 (84.15%), Query Frame = -2
Query:  316 YVILDMGAVGNIDTSGISMLEEVKKTLDRRELKVVLANPGAEVTKKLDKSKFIENMGQEWIFLAVGEAVTACNFRLHTCEPN 561
            Y++LDM AVGNIDTSGISMLEE+ K L RRELK+V+ANPGAEV KKL KS FIE++G+E I+L V EAV AC+F LHT +P+
Sbjct:  556 YIVLDMSAVGNIDTSGISMLEELNKILGRRELKLVIANPGAEVMKKLSKSTFIESIGKERIYLTVAEAVAACDFMLHTAKPD 637          
BLAST of CN189730 vs. ExPASy Swiss-Prot
Match: SUT11_ARATH (Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.169e-14
Identity = 36/73 (49.32%), Postives = 57/73 (78.08%), Query Frame = -2
Query:  343 YVILDMGAVGNIDTSGISMLEEVKKTLDRRELKVVLANPGAEVTKKLDKSKFIENMGQEWIFLAVGEAVTACN 561
            +VI++M  V +IDTSGI  +EE+ K+L+++E++++LANPG  V +KL  SKF+E +G++ IFL VG+AV  C+
Sbjct:  569 FVIIEMSPVTDIDTSGIHSIEELLKSLEKQEIQLILANPGPVVIEKLYASKFVEEIGEKNIFLTVGDAVAVCS 641          
BLAST of CN189730 vs. ExPASy Swiss-Prot
Match: SUT35_ARATH (Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.462e-12
Identity = 31/81 (38.27%), Postives = 55/81 (67.90%), Query Frame = -2
Query:  319 YVILDMGAVGNIDTSGISMLEEVKKTLDRRELKVVLANPGAEVTKKLDKSKFIENMGQEWIFLAVGEAVTACNFRLHTCEP 561
            +++LD+  V  ID +G+  L E+++ L  + +K+V+ NP  EV +K+  S F+E +G+E++FL++ +AV AC F L T +P
Sbjct:  552 FLLLDLSGVSTIDMTGMETLLEIQRILGSKNIKMVIINPRFEVLEKMMLSHFVEKIGKEYMFLSIDDAVQACRFNLTTTKP 632          
BLAST of CN189730 vs. ExPASy Swiss-Prot
Match: SUT13_ARATH (Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 35/76 (46.05%), Postives = 54/76 (71.05%), Query Frame = -2
Query:  334 YVILDMGAVGNIDTSGISMLEEVKKTLDRRELKVVLANPGAEVTKKLDKSKFIENMGQEWIFLAVGEAVTACNFRL 561
            ++I++M  V +IDTSGI  LE++ K+L +R++++VLANPG  V  KL  S F + +G + IFL V EAV +C+ +L
Sbjct:  577 FLIIEMSPVTDIDTSGIHALEDLYKSLQKRDIQLVLANPGPPVINKLHVSHFADLIGHDKIFLTVAEAVDSCSPKL 652          
BLAST of CN189730 vs. ExPASy Swiss-Prot
Match: SUT12_ARATH (Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11
Identity = 33/72 (45.83%), Postives = 52/72 (72.22%), Query Frame = -2
Query:  346 YVILDMGAVGNIDTSGISMLEEVKKTLDRRELKVVLANPGAEVTKKLDKSKFIENMGQEWIFLAVGEAVTAC 561
            ++I++M  V +IDTSGI  LE++ K+L +R+++++LANPG  V  KL  S F + +GQ+ I+L V +AV AC
Sbjct:  574 FLIIEMSPVTDIDTSGIHALEDLYKSLQKRDIQLILANPGPLVIGKLHLSHFADMLGQDNIYLTVADAVEAC 645          
BLAST of CN189730 vs. ExPASy Swiss-Prot
Match: SUT1_STYHA (High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = -2
Query:  355 YVILDMGAVGNIDTSGISMLEEVKKTLDRRELKVVLANPGAEVTKKLDKSKFIENMGQEWIFLAVGEAV 561
            ++I +M  V +IDTSGI   EE+ KTL +RE++++LANPG  V +KL  SK  E +G++ IFL V +AV
Sbjct:  589 HLITEMSPVPDIDTSGIHAFEELYKTLQKREVQLILANPGPVVIEKLHASKLTELIGEDKIFLTVADAV 657          
The following BLAST results are available for this feature:
BLAST of CN189730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SUT31_ARATH1.710e-2762.11Sulfate transporter 3.1 OS=Arabidopsis thaliana GN... [more]
SUT32_ARATH3.226e-2669.51Sulfate transporter 3.2 OS=Arabidopsis thaliana GN... [more]
SUT11_ARATH2.169e-1449.32Sulfate transporter 1.1 OS=Arabidopsis thaliana GN... [more]
SUT35_ARATH3.462e-1238.27Probable sulfate transporter 3.5 OS=Arabidopsis th... [more]
SUT13_ARATH4.522e-1246.05Sulfate transporter 1.3 OS=Arabidopsis thaliana GN... [more]
SUT12_ARATH1.718e-1145.83Sulfate transporter 1.2 OS=Arabidopsis thaliana GN... [more]
SUT1_STYHA5.000e-1149.28High affinity sulfate transporter 1 OS=Stylosanthe... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0002F08_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189730 ID=CN189730; Name=CN189730; organism=Citrus sinensis; type=EST; length=610bp
TTTTTTTTTTTTTTAAAAAATAGCAATCTGCCAAAATTTGGGATAAGACT
TCTATTATTGTACAATACCTAGCGTTGGAAGGAAAAAAATACCTCCAACT
TCAATATAACATTATAACATCAACCTCAAACTAAATGTGACTCGTCACTG
TTTAGTTAATTCCGATGCATACATTATGTTGCATCATAATTACATCAAGC
CACAAAAACATATTTTCCCTAAAATAGATAAAAAGTAATTGAGCGATTGC
AAAGAAAAGTAATGTTAAATATGGATTTATACGTTGTCCCATGGCTCTGA
TTCTGCTTTCTCAGGATTTGGTTCGCAAGTATGAAGCCTGAAATTGCATG
CTGTAACAGCCTCCCCTACTGCCAAAAATATCCATTCTTGGCCCATATTT
TCAATGAACTTGGATTTGTCAAGCTTCTTCGTCACCTCAGCTCCAGGATT
TGCTAGCACAACCTTGAGCTCTCTTCTATCAAGAGTTTTCTTAACTTCCT
CAAGCATGCTGATGCCACTAGTGTCAATGTTACCAACAGCGCCCATATCC
AGTATAACATAGGGGAAGCTGGATTCCTCTGAAGCTTTCAACTTATCTTC
CTCTTCCTCA
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