DR908844

Overview
NameDR908844
Unique NameDR908844
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR908844 vs. ExPASy Swiss-Prot
Match: UBQL_DICDI (Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.457e-22
Identity = 62/155 (40.00%), Postives = 80/155 (51.61%), Query Frame = 1 
Query:    1 QILGLNPQLRSMVDSNSQLREMIQNPEFLRQLTNPETMQQMVTLQQFLLTQLGRAQSXXXXXXXXXXXXXXNMG------LEMLMNMFGGLGA--------GSLAVPNRSDVPPEQLYATQLSQLQEMGFFDTQENIRALIATAGNVHAAVERLL 423
            Q++ +NPQLR M+DSN QLRE + NPEFL  +TNPE M  M+ LQQ + T                      MG           NMFGG+G          S   P  +  PPEQ +  QL QL+E+GF D   NI AL +T GN++ A++RLL
Sbjct:  368 QMITMNPQLRQMMDSNPQLREAMNNPEFLNMMTNPENMNAMMQLQQAMGTLRNNGVFPGGMGGMGGMGGMGGMGGMGGMDFSQFGNMFGGMGGMGGMGNNNSSTTRPPVNQEPPEQRFRLQLEQLEELGFVDRAANISALTSTNGNINLAIDRLL 522
The following BLAST results are available for this feature:
BLAST of DR908844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UBQL_DICDI2.457e-2240.00Ubiquilin OS=Dictyostelium discoideum GN=ubqln PE=... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16972 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-46_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908844 ID=DR908844; Name=DR908844; organism=Citrus sinensis; type=EST; length=573bp
CAGATTCTTGGTCTTAATCCACAGCTGCGCAGCATGGTTGATTCCAATTC
TCAACTGAGAGAAATGATACAAAATCCTGAATTTCTTCGTCAGTTGACTA
ATCCTGAGACGATGCAGCAAATGGTGACTTTGCAGCAATTTCTCTTGACT
CAACTTGGTCGGGCACAGTCAACGCAGCAACCAGGCCAGACTGGTGGAGG
CACAGGGACTCCTAACATGGGGTTGGAGATGTTAATGAACATGTTTGGTG
GACTTGGGGCGGGCAGCCTAGCTGTTCCTAACAGATCTGATGTGCCTCCA
GAGCAATTATATGCCACCCAGTTGTCACAACTTCAAGAAATGGGTTTCTT
TGATACACAAGAAAATATTCGGGCTTTAATTGCAACTGCTGGAAATGTCC
ATGCTGCAGTGGAGCGACTCTTGGGGAATTCTGGTCAGTAGGTTGCTATC
AATGTTTAATATCACCTGGTTAGTGCCGTGATAAGGACTGGTGGGGATCA
TCGGTTGAACTGGAGTCATATTCAAGCCCATTTTGGGTATGAATAATTTT
AGTTATATATCATAGTAAGGGCT
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