DR908836

Overview
NameDR908836
Unique NameDR908836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAA2_ARATH (Alpha-soluble NSF attachment protein 2 OS=Arabidopsis thaliana GN=ASNAP2 PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 8.674e-75
Identity = 126/171 (73.68%), Postives = 148/171 (86.55%), Query Frame = 1
Query:    4 SFKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAL 516
            S+KLAKSWD+AG  Y+KLA+CHLK +SKH+AA AY +AA CYKK  +NEA SCLE+AVN+FC+IGRL+MAARYYKEIAE YES+   EQ I +FEKAA+ FQNEEVTTSANQC  KVAQYAA+LEQY K+I+IYE+IAR SLNNNLLKYGVKGHLL AG+C LCK DVV++
Sbjct:   42 SYKLAKSWDQAGKAYLKLADCHLKSDSKHDAANAYAEAAKCYKKVDTNEAASCLERAVNIFCEIGRLNMAARYYKEIAEYYESDQKFEQAIAYFEKAAEFFQNEEVTTSANQCNLKVAQYAAQLEQYEKAIKIYEDIARHSLNNNLLKYGVKGHLLTAGMCHLCKADVVSI 212          

HSP 2 Score: 33.113 bits (74), Expect = 8.674e-75
Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 3
Query:  513 ITNALERYQDMDPTF 557
            ITNALE+YQD+DPTF
Sbjct:  212 ITNALEKYQDLDPTF 226          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAA_VITVI (Alpha-soluble NSF attachment protein OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 4.660e-73
Identity = 125/170 (73.53%), Postives = 145/170 (85.29%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAL 516
            FKLAKSWD+AG+TYVKL+      +SKHEAAQAY DA HCYKKTS+ EAISCLEQA  +F D GR +MA +YYKEIAELYE E N EQ I++FEKAAD++Q+EE TT+ANQC  KVAQ+AA+LEQY K+I+IYE+I R SLNNNLLKYGVKGHLLNAGICQLCKGDVVA+
Sbjct:   43 FKLAKSWDRAGSTYVKLSTVIQSSDSKHEAAQAYADAGHCYKKTSAKEAISCLEQAAYLFLDNGRFNMAGKYYKEIAELYELEQNFEQAIIYFEKAADIYQSEEATTAANQCNAKVAQFAAQLEQYQKAIQIYEDIGRPSLNNNLLKYGVKGHLLNAGICQLCKGDVVAI 212          

HSP 2 Score: 33.113 bits (74), Expect = 4.660e-73
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3
Query:  495 QG*CCCITNALERYQDMDPTF 557
            +G    ITNAL+RYQ+MDPTF
Sbjct:  206 KGDVVAITNALDRYQEMDPTF 226          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAA_SOLTU (Alpha-soluble NSF attachment protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.337e-66
Identity = 118/170 (69.41%), Postives = 142/170 (83.53%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVVAL 516
            FKLAKSWDKAGA YVKLANCHLKL+SKHEAA AY DAAHCYKK++  EA+SCLEQAVN F DIGRL+M+ARYYKEIAELYE E N++Q I +     +   +E+V+   NQC +K+AQ++A+ E+Y K+IEI+EEIAR S+NNNLLKYGV+ HLLNAGICQLCKGDVV +
Sbjct:   43 FKLAKSWDKAGAVYVKLANCHLKLDSKHEAANAYADAAHCYKKSNIKEAVSCLEQAVNFFLDIGRLNMSARYYKEIAELYEQEQNLDQAIRYAVYEINP-GSEDVSAPPNQCLKKIAQFSAQNEKYPKAIEIFEEIARHSVNNNLLKYGVREHLLNAGICQLCKGDVVPI 211          

HSP 2 Score: 30.8018 bits (68), Expect = 1.337e-66
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 3
Query:  513 ITNALERYQDMDPTF 557
            I NALERYQ++DPTF
Sbjct:  211 INNALERYQELDPTF 225          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAA_DICDI (Alpha-soluble NSF attachment protein OS=Dictyostelium discoideum GN=snpA PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.543e-42
Identity = 82/168 (48.81%), Postives = 119/168 (70.83%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESEHNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKGDVV 510
            FK++K WD+AGA + K A C LK  SKH+AA +YV AA CYKK +  +AI+CL+ A+  + D GR +++A++ KEIAELYE+E + +Q I  ++ A+D F  E  T S++QC  K+A ++A+LE+Y KSIEIYE++A  SL+NNL ++G K + L A +C L   DVV
Sbjct:   48 FKMSKKWDQAGAAFQKAAECFLKGSSKHDAASSYVLAAGCYKKGNVIDAITCLKAAIEYYTDEGRFAISAKHQKEIAELYEAEGDFDQAIASYQIASDYFDGENSTVSSHQCLLKIALFSAQLERYEKSIEIYEQVAAASLDNNLTQWGCKEYFLRACLCYLAADDVV 215          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAP_DROME (Soluble NSF attachment protein OS=Drosophila melanogaster GN=Snap PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.909e-40
Identity = 74/163 (45.40%), Postives = 117/163 (71.78%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQL 492
            FK++K+W KAG  + + A  H +  S+H+A   YVDA++CYKK     A++CL ++++++ D+GR +MAA++++ IAE+YES+ +N+ ++I  +E+AAD F+ EE  +SAN+C  KVAQYAA+LE Y K+I IYE++A  SL ++LLKY  K +   A +C L
Sbjct:   50 FKMSKNWTKAGECFCEAATLHARAGSRHDAGTCYVDASNCYKKVDVESAVNCLMKSIDIYTDMGRFTMAAKHHQSIAEMYESDPNNLAKSIQHYEQAADYFKGEESVSSANKCMLKVAQYAAQLEDYEKAISIYEQVAASSLESSLLKYSAKEYFFRAALCHL 212          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAA_BOVIN (Alpha-soluble NSF attachment protein OS=Bos taurus GN=NAPA PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.237e-39
Identity = 73/164 (44.51%), Postives = 118/164 (71.95%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLC 495
            FK+AK+W  AG+ + + A+ HL+L+SKH+AA  +VDA + +KK    EAI+CL +A+ ++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+I+IYE++   ++++ LLKY  K +   A +C  C
Sbjct:   52 FKMAKNWSAAGSAFCQAAHVHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTNAMDSPLLKYSAKDYFFKAALCHFC 215          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAB_MOUSE (Beta-soluble NSF attachment protein OS=Mus musculus GN=Napb PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 3.600e-39
Identity = 73/161 (45.34%), Postives = 116/161 (72.05%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGIC 486
            FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEIYE++   +++N LLKY  K +   A +C
Sbjct:   52 FKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALC 212          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAB_HUMAN (Beta-soluble NSF attachment protein OS=Homo sapiens GN=NAPB PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 3.600e-39
Identity = 73/161 (45.34%), Postives = 116/161 (72.05%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGIC 486
            FK+AK+W  AG  + + A  H++L+SKH++A ++VDA + YKK    EAI+CL  A++++ D+GR ++AA+++  IAE+YE+E  +IE+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+IEIYE++   +++N LLKY  K +   A +C
Sbjct:   52 FKMAKNWSAAGNAFCQAAKLHMQLQSKHDSATSFVDAGNAYKKADPQEAINCLNAAIDIYTDMGRFTIAAKHHITIAEIYETELVDIEKAIAHYEQSADYYKGEESNSSANKCLLKVAAYAAQLEQYQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALC 212          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAA_RAT (Alpha-soluble NSF attachment protein OS=Rattus norvegicus GN=Napa PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 4.701e-39
Identity = 72/164 (43.90%), Postives = 116/164 (70.73%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLC 495
            FK+AK+W  AG  + + A  HL+L+SKH+AA  +VDA + +KK    EAI+CL +A+ ++ D+GR ++AA+++  IAE+YE+E  ++E+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+I+IYE++   ++++ LLKY  K +   A +C  C
Sbjct:   52 FKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFC 215          
BLAST of DR908836 vs. ExPASy Swiss-Prot
Match: SNAA_MOUSE (Alpha-soluble NSF attachment protein OS=Mus musculus GN=Napa PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.701e-39
Identity = 72/164 (43.90%), Postives = 116/164 (70.73%), Query Frame = 1
Query:    7 FKLAKSWDKAGATYVKLANCHLKLESKHEAAQAYVDAAHCYKKTSSNEAISCLEQAVNMFCDIGRLSMAARYYKEIAELYESE-HNIEQTIVFFEKAADMFQNEEVTTSANQCKQKVAQYAAELEQYHKSIEIYEEIARQSLNNNLLKYGVKGHLLNAGICQLC 495
            FK+AK+W  AG  + + A  HL+L+SKH+AA  +VDA + +KK    EAI+CL +A+ ++ D+GR ++AA+++  IAE+YE+E  ++E+ I  +E++AD ++ EE  +SAN+C  KVA YAA+LEQY K+I+IYE++   ++++ LLKY  K +   A +C  C
Sbjct:   52 FKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFC 215          
The following BLAST results are available for this feature:
BLAST of DR908836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SNAA2_ARATH8.674e-7573.68Alpha-soluble NSF attachment protein 2 OS=Arabidop... [more]
SNAA_VITVI4.660e-7373.53Alpha-soluble NSF attachment protein OS=Vitis vini... [more]
SNAA_SOLTU1.337e-6669.41Alpha-soluble NSF attachment protein OS=Solanum tu... [more]
SNAA_DICDI4.543e-4248.81Alpha-soluble NSF attachment protein OS=Dictyostel... [more]
SNAP_DROME1.909e-4045.40Soluble NSF attachment protein OS=Drosophila melan... [more]
SNAA_BOVIN1.237e-3944.51Alpha-soluble NSF attachment protein OS=Bos taurus... [more]
SNAB_MOUSE3.600e-3945.34Beta-soluble NSF attachment protein OS=Mus musculu... [more]
SNAB_HUMAN3.600e-3945.34Beta-soluble NSF attachment protein OS=Homo sapien... [more]
SNAA_RAT4.701e-3943.90Alpha-soluble NSF attachment protein OS=Rattus nor... [more]
SNAA_MOUSE4.701e-3943.90Alpha-soluble NSF attachment protein OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16964 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-14_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908836 ID=DR908836; Name=DR908836; organism=Citrus sinensis; type=EST; length=559bp
CCGTCCTTCAAGCTCGCCAAATCATGGGATAAAGCTGGAGCAACTTATGT
TAAGTTGGCAAACTGTCATTTAAAGTTGGAAAGCAAACATGAAGCTGCTC
AAGCTTATGTTGATGCTGCCCACTGCTATAAGAAAACATCTTCAAATGAG
GCCATATCTTGCTTAGAACAGGCTGTAAATATGTTTTGTGACATTGGAAG
GCTCAGTATGGCTGCAAGATATTATAAGGAAATTGCTGAGCTGTATGAAT
CTGAGCACAACATTGAACAGACTATTGTTTTCTTTGAGAAGGCAGCTGAT
ATGTTCCAAAATGAAGAAGTAACAACTTCTGCTAACCAGTGCAAGCAGAA
AGTTGCACAATATGCTGCTGAATTGGAACAATATCACAAGTCAATTGAGA
TTTATGAAGAGATTGCTAGGCAGTCTCTCAACAACAACTTGTTGAAATAT
GGAGTGAAAGGACATCTTCTTAATGCTGGCATATGCCAACTTTGCAAGGG
TGATGTTGTTGCATTACCAACGCATTGGAGCGATACCAGGACATGGATCC
TACCTTTTT
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