DR908834

Overview
NameDR908834
Unique NameDR908834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR908834 vs. ExPASy Swiss-Prot
Match: HEBP2_HUMAN (Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.067e-13
Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = 1 
Query:  115 EESDFEVRLYSQSTWMSARVREELSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVSLYLPDKFQSDPPTPLPEIHLNPFEWDSHCVAVRKFSGFA 459
            +   +E+R Y  + W+S  V E + +  A   GF +L  YIQG N    +I MT+P+ + + PG+GP       +SLY+P + Q DPP PL E  +   +     V VR F GF+
Sbjct:   34 QPGSYEIRHYGPAKWVSTSV-ESMDWDSAIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPPRPL-ESDVFIEDRAEMTVFVRSFDGFS 146
[Close]
BLAST of DR908834 vs. ExPASy Swiss-Prot
Match: HEBP2_MOUSE (Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11
Identity = 39/115 (33.91%), Postives = 59/115 (51.30%), Query Frame = 1 
Query:  115 EESDFEVRLYSQSTWMSARVREELSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVSLYLPDKFQSDPPTPLPEIHLNPFEWDSHCVAVRKFSGFA 459
            +   +E+R Y  + W+S  V E L +  A   GF +L  YIQG N    +I +T+P+ + + PG+ P       +SLY+P + Q DPP P  E  +   +     V VR F GF+
Sbjct:   34 QPGSYEIRHYGPAKWVSTCV-ESLDWDSAIQTGFTKLNGYIQGKNEKEMKIKLTAPVTSYVEPGSSPFSESTITISLYIPSEQQPDPPRP-SESDVFIEDRAEMTVFVRSFDGFS 146
The following BLAST results are available for this feature:
BLAST of DR908834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
HEBP2_HUMAN6.067e-1335.65Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE... [more]
HEBP2_MOUSE3.329e-1133.91Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16962 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-09_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908834 ID=DR908834; Name=DR908834; organism=Citrus sinensis; type=EST; length=573bp
GAAAGAGGGGTCAACAATGGAGAGAGCGAGTAAGTTAATGAAGCTGTCGA
CTCTTCTGTGTATGGTGGTACTATGTAAGGCGATCGAGTCGCCGCAGTAC
CGCGGTTGTACACCGAAGAATCGGATTTCGAAGTCAGACTCTATAGTCAG
TCCACGTGGATGTCTGCCCGTGTTCGTGAAGAACTCTCCTTTGCCAAAGC
CACCTTACTCGGCTTCCACAGGTTGTTCCAGTACATTCAAGGTGCCAATC
TAAACAACTCTCGGATTGCAATGACCTCTCCTATTGTTACAAGCTTAGTT
CCAGGAGCTGGTCCTCTTCACTCGTATGCCTATGTTGTCAGTTTGTACTT
ACCTGACAAGTTCCAATCTGATCCTCCAACGCCCTTACCAGAAATTCATC
TGAATCCCTTTGAATGGGACAGTCACTGTGTTGCTGTCAGGAAGTTTTCT
GGATTTGCAATTGATGAAGTCATCGTGAAAGAGGCAGATAACCTTTCCTT
CAGCTTGAGGAGGTCTCCTTGGGCTAACTCTACTTCTTCAGATAGCGGGT
ATGCTTACTCCGTTGCACAGTAT
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