DR908833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: RH11_ARATH (DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana GN=RH11 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 9.251e-54 Identity = 101/113 (89.38%), Postives = 109/113 (96.46%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 AT+IHGDRTQQERE+ALRSFK+G+TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG+ATAFFNENN LAR LAELMQE+NQEVP WLTRYASRA++ Sbjct: 435 ATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYASRASF 547
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: RH37_ARATH (DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana GN=RH37 PE=2 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.208e-53 Identity = 100/113 (88.50%), Postives = 110/113 (97.35%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 AT+IHGDRTQQERE+AL++FKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN+ N SLARPLAELMQE+NQEVP WLTRYASR+++ Sbjct: 445 ATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWLTRYASRSSF 557
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: RH52_ARATH (DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana GN=RH52 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.061e-53 Identity = 99/113 (87.61%), Postives = 110/113 (97.35%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 ATTIHGDR+QQERE+ALRSFK+G+TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG SGLATAFFN+NN ++A+PLAELMQE+NQEVP WLTRYASRA++ Sbjct: 432 ATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLTRYASRASF 544
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: RH52C_ORYSJ (DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica GN=Os11g0599500 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 2.692e-53 Identity = 102/113 (90.27%), Postives = 107/113 (94.69%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 AT+IHGDR QQERE ALRSFKSG TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENN S+AR LAELMQESNQEVPAWL+RYA+R +Y Sbjct: 443 ATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQESNQEVPAWLSRYAARPSY 555
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: RH37_ORYSJ (DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica GN=PL10A PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.023e-52 Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 AT+IHGDRTQQERE ALRSFKSG TPILVATDVAARGLDIPHVAHV+NFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE NLSLARPL ELMQE+NQEVP WL RY++R+++ Sbjct: 460 ATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNLSLARPLCELMQEANQEVPQWLERYSARSSF 572
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: RH52B_ORYSJ (DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 3.887e-52 Identity = 98/113 (86.73%), Postives = 107/113 (94.69%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 AT+IHGDRTQQERE ALRSFKSG TPILVATDVAARGLDIPHVAHV+NFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE+N LARPL+ELMQE+NQEVP WL RYA+R+++ Sbjct: 455 ATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLARPLSELMQEANQEVPQWLERYAARSSF 567
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: RH52A_ORYSJ (DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica GN=Os06g0602400 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.061e-41 Identity = 81/113 (71.68%), Postives = 96/113 (84.96%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 AT IHGDRTQQERE ALRSFK+G TPI+VATDVA+RGLD+P+VAHV+N+DLP I+DYVHRIGRTGRAGK+G ATAFF E++ SLA+ L ELM E+ Q+VP WL +YA R Y Sbjct: 378 ATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPDWLVQYAERPYY 490
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DED1_USTMA (ATP-dependent RNA helicase DED1 OS=Ustilago maydis GN=DED1 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.773e-39 Identity = 77/113 (68.14%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 AT+IHGDRTQ+ERE AL F+SGKTPI+VAT VAARGLDIP+V HVVN+DLP+D+DDYVHRIGRTGRAG G ATAFFN N ++ R L EL++E+NQEVP WL A + + Sbjct: 477 ATSIHGDRTQRERERALELFRSGKTPIMVATAVAARGLDIPNVTHVVNYDLPSDVDDYVHRIGRTGRAGNVGHATAFFNRGNKNIVRDLIELLKEANQEVPQWLEAVARESMF 589
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DED1_GIBZE (ATP-dependent RNA helicase DED1 OS=Gibberella zeae GN=DED1 PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 8.406e-39 Identity = 74/113 (65.49%), Postives = 93/113 (82.30%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 AT+IHGDRTQ+ERE AL F++G+ PILVAT VAARGLDIPHV HV+N+DLP D+DDYVHRIGRTGRAG +G+ATAFFN N + R L +L++E+NQEVPA+L A +++ Sbjct: 472 ATSIHGDRTQRERERALEFFRNGRCPILVATAVAARGLDIPHVTHVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGNRGIVRELMDLLKEANQEVPAFLETIARESSF 584
BLAST of DR908833 vs. ExPASy Swiss-Prot
Match: DED1_NEUCR (ATP-dependent RNA helicase ded-1 OS=Neurospora crassa GN=ded-1 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.873e-38 Identity = 75/113 (66.37%), Postives = 93/113 (82.30%), Query Frame = 1 Query: 1 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 339 AT+IHGDRTQ+ERE AL F++G+ PILVAT VAARGLDIP+V HV+N+DLP DIDDYVHRIGRTGRAG +G+ATAFFN N + R L EL++E+NQEVPA+L A +++ Sbjct: 480 ATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRELLELLKEANQEVPAFLETIARESSF 592 The following BLAST results are available for this feature:
BLAST of DR908833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908833 ID=DR908833; Name=DR908833; organism=Citrus sinensis; type=EST; length=573bpback to top |