CN189683

Overview
NameCN189683
Unique NameCN189683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length491
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189683 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.350e-26
Identity = 55/80 (68.75%), Postives = 68/80 (85.00%), Query Frame = -2
Query:  251 MWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 490
            +WE+K GK LER YV EEQ+LKNIQEA+ P+   LSIYH+AFV+G  T+F+IEPSFGVEAS++YPDVKYT +DE LNQ+V
Sbjct:  229 LWEKKTGKNLERLYVPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDVKYTPIDEILNQYV 308          
BLAST of CN189683 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 9.069e-24
Identity = 51/80 (63.75%), Postives = 65/80 (81.25%), Query Frame = -2
Query:  251 MWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 490
            +WE+K GKT  REYV EE +LK IQE+  PL  +L+I H+AFV G QT F+I+P+ GV+AS+LYPDVKYTTVDEYLN+F+
Sbjct:  230 LWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL 309          
BLAST of CN189683 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.810e-22
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = -2
Query:  254 MWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQF 490
            +WE+KIGK+LE+ ++ EEQLLK+IQE+  P+  +LSI H+ FV G  T+  IEPSFGVEAS+LYPDVKYT+VDEYL+ F
Sbjct:  232 LWEKKIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNG-DTNISIEPSFGVEASELYPDVKYTSVDEYLSYF 309          
BLAST of CN189683 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.226e-20
Identity = 47/80 (58.75%), Postives = 64/80 (80.00%), Query Frame = -2
Query:  251 MWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 490
            +WE+KIGKTLE+ YVSEEQ+LK+IQE++ P   LL++YHS  ++G    ++I+P+  +EAS+ YPDV YTT DEYLNQFV
Sbjct:  240 LWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKG-DAVYEIDPAKDIEASEAYPDVTYTTADEYLNQFV 318          
BLAST of CN189683 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.945e-20
Identity = 47/80 (58.75%), Postives = 62/80 (77.50%), Query Frame = -2
Query:  251 MWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 490
            +WE+KIGKTLE+ YVSEEQ+LK+IQ ++ P   LL++YHS  ++G    ++I+P+  VEA   YPDVKYTT DEYLNQFV
Sbjct:  240 LWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKG-DAVYEIDPAKDVEAYDAYPDVKYTTADEYLNQFV 318          
BLAST of CN189683 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.038e-19
Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = -2
Query:  251 MWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 490
            +WE KIGKTLE+ Y+SEE +L+ +QE   PL   L+I HS FV G   +F+++P  GVEA++LYP VKYTTVDE+ N+FV
Sbjct:  231 LWEDKIGKTLEKLYLSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPKVKYTTVDEFYNKFV 310          
BLAST of CN189683 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.360e-18
Identity = 43/80 (53.75%), Postives = 60/80 (75.00%), Query Frame = -2
Query:  251 MWERKIGKTLEREYVSEEQLLKNIQEAAPPLGRLLSIYHSAFVEGVQTDFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 490
            +WE+KIGKTLE+ Y+SEE++LK+I  +  P   LL++YHS  ++G    ++I+P+   EA  LYPDVKYTT DEYL+QFV
Sbjct:  240 LWEKKIGKTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKG-DAVYEIDPAKDAEAYDLYPDVKYTTADEYLDQFV 318          
The following BLAST results are available for this feature:
BLAST of CN189683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
IFRH_SOLTU4.350e-2668.75Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_MAIZE9.069e-2463.75Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_ARATH3.810e-2263.29Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFR_MEDSA1.226e-2058.75Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_PEA7.945e-2058.75Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFRH_TOBAC1.038e-1956.25Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IFR_CICAR4.360e-1853.75Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189683 ID=CN189683; Name=CN189683; organism=Citrus sinensis; type=EST; length=491bp
TTTTTTTTTTTTTTTTTCCCTGATCATGTTGGCTTTATAATTATTCTCAA
ATCAAGTACATGGCCTACTTCTTTTGATCACTGACATAGCAAACATAATA
TGGTCTTACAAATTCCATTGACAACCAGAAAAAAGTAAGGCCAAGAACCA
TAATTTTTACATATAAAAACCAAAGATTGCAACAAGCCCATTATTTATTT
ACCAAGAGTCCAAGATCCTGCAAGCTGCAGCTGGAAGCAAAAAAGGGTTA
CACAAACTGATTGAGGTACTCATCAACTGTAGTGTACTTGACATCAGGAT
AAAGCTGCGAGGCTTCAACTCCAAACGATGGTTCAATCTTGAAGTCGGTT
TGAACTCCCTCCACGAAAGCAGAGTGATAAATTGATAACAACCTCCCGAG
TGGAGGTGCAGCTTCTTGAATATTCTTTAGGAGCTGCTCTTCTGAAACAT
ACTCCCTTTCAAGGGTTTTGCCAATCTTTCTCTCCCACATA
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