CN189681

Overview
NameCN189681
Unique NameCN189681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189681 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.557e-31
Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = -3
Query:  311 TQLWRNSKPSSISAYRINFDPEDIMAEISKNGPVEVSFPVYEDFAHYKSGVYKPFPGDVMGGHAVKLIGWGTSDDGEDYWILVNQWNRSWGADGYFKIKRGSNECGIEEDVVVGFP 658
            T  ++  K    S+Y I+ + ++IMAEI KNGPVE +F VY DF  YKSGVY+   GD+MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++V G P
Sbjct:  216 TPSYKEDKHFGCSSYSISRNEKEIMAEIYKNGPVEGAFTVYSDFLQYKSGVYQHVTGDLMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGIP 330          
BLAST of CN189681 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.906e-30
Identity = 57/116 (49.14%), Postives = 81/116 (69.83%), Query Frame = -3
Query:  302 WRNSKPSSISAYRINFDPEDIMAEISKNGPVEVSFPVYEDFAHYKSGVYKPFPGDVMGGHAVKLIGWGTSDDGEDYWILVNQWNRSWGADGYFKIKRGSNECGIEEDVVVGFPSSK 649
            ++  K    ++Y ++   ++IMAEI KNGPVE +F V+ DF  YKSGVYK   GDVMGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG N CGIE ++V G P ++
Sbjct:  219 YKEDKHYGYTSYSVSDSEKEIMAEIYKNGPVEGAFTVFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGI-ENGVPYWLVANSWNVDWGDNGFFKILRGENHCGIESEIVAGIPRTQ 333          
BLAST of CN189681 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.252e-30
Identity = 57/122 (46.72%), Postives = 83/122 (68.03%), Query Frame = -3
Query:  284 WRNSKPSSISAYRINFDPEDIMAEISKNGPVEVSFPVYEDFAHYKSGVYKPFPGDVMGGHAVKLIGWGTSDDGEDYWILVNQWNRSWGADGYFKIKRGSNECGIEEDVVVGFPSSKNLVKEI 649
            ++  K    ++Y ++   +DIMAEI KNGPVE +F VY DF  YKSGVY+   G++MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE +VV G P +    ++I
Sbjct:  219 YKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of CN189681 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 3.252e-30
Identity = 57/122 (46.72%), Postives = 83/122 (68.03%), Query Frame = -3
Query:  284 WRNSKPSSISAYRINFDPEDIMAEISKNGPVEVSFPVYEDFAHYKSGVYKPFPGDVMGGHAVKLIGWGTSDDGEDYWILVNQWNRSWGADGYFKIKRGSNECGIEEDVVVGFPSSKNLVKEI 649
            ++  K    ++Y ++   +DIMAEI KNGPVE +F VY DF  YKSGVY+   G++MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE +VV G P +    ++I
Sbjct:  219 YKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of CN189681 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.247e-30
Identity = 57/122 (46.72%), Postives = 82/122 (67.21%), Query Frame = -3
Query:  284 WRNSKPSSISAYRINFDPEDIMAEISKNGPVEVSFPVYEDFAHYKSGVYKPFPGDVMGGHAVKLIGWGTSDDGEDYWILVNQWNRSWGADGYFKIKRGSNECGIEEDVVVGFPSSKNLVKEI 649
            ++  K    ++Y ++    DIMAEI KNGPVE +F VY DF  YKSGVY+   G++MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE +VV G P +    ++I
Sbjct:  219 YKQDKHYGYNSYSVSNSERDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of CN189681 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.244e-30
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = -3
Query:  311 WRNSKPSSISAYRINFDPEDIMAEISKNGPVEVSFPVYEDFAHYKSGVYKPFPGDVMGGHAVKLIGWGTSDDGEDYWILVNQWNRSWGADGYFKIKRGSNECGIEEDVVVGFP 649
            ++  K    ++Y ++   ++IMAEI KNGPVE +F V+ DF  YKSGVYK   GD+MGGHA++++GWG  ++G  YW+  N WN  WG +G+FKI RG N CGIE ++V G P
Sbjct:  219 YKEDKHFGYTSYSVSNSVKEIMAEIYKNGPVEGAFTVFSDFLTYKSGVYKHEAGDMMGGHAIRILGWGV-ENGVPYWLAANSWNLDWGDNGFFKILRGENHCGIESEIVAGIP 330          
BLAST of CN189681 vs. ExPASy Swiss-Prot
Match: CATB_BOVIN (Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5)

HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29
Identity = 55/113 (48.67%), Postives = 79/113 (69.91%), Query Frame = -3
Query:  311 WRNSKPSSISAYRINFDPEDIMAEISKNGPVEVSFPVYEDFAHYKSGVYKPFPGDVMGGHAVKLIGWGTSDDGEDYWILVNQWNRSWGADGYFKIKRGSNECGIEEDVVVGFP 649
            ++  K    S+Y +  + ++IMAEI KNGPVE +F VY DF  YKSGVY+   G++MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++V G P
Sbjct:  219 YKEDKHFGCSSYSVANNEKEIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGMP 330          
BLAST of CN189681 vs. ExPASy Swiss-Prot
Match: CATB_CHICK (Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.009e-29
Identity = 55/113 (48.67%), Postives = 77/113 (68.14%), Query Frame = -3
Query:  311 WRNSKPSSISAYRINFDPEDIMAEISKNGPVEVSFPVYEDFAHYKSGVYKPFPGDVMGGHAVKLIGWGTSDDGEDYWILVNQWNRSWGADGYFKIKRGSNECGIEEDVVVGFP 649
            ++  K   I++Y +    ++IMAEI KNGPVE +F VYEDF  YKSGVY+   G+ +GGHA++++GWG  ++G  YW+  N WN  WG  G+FKI RG + CGIE ++V G P
Sbjct:  220 YKEDKHYGITSYGVPRSEKEIMAEIYKNGPVEGAFIVYEDFLMYKSGVYQHVSGEQVGGHAIRILGWGV-ENGTPYWLAANSWNTDWGITGFFKILRGEDHCGIESEIVAGVP 331          
BLAST of CN189681 vs. ExPASy Swiss-Prot
Match: CYSP2_HAECO (Cathepsin B-like cysteine proteinase 2 OS=Haemonchus contortus GN=AC-2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 56/120 (46.67%), Postives = 79/120 (65.83%), Query Frame = -3
Query:  296 QLWRNSKPSSISAYRINFDPEDIMAEISKNGPVEVSFPVYEDFAHYKSGVYKPFPGDVMGGHAVKLIGWGTSDDGEDYWILVNQWNRSWGADGYFKIKRGSNECGIEEDVVVGFPSSKNL 655
            +++R  K     AY +    + I +EI KNGPV  SF VYEDF HYKSG+YK   G++ G HAVK+IGWG +++  D+W++ N W+  WG  GYF+I RGSN+CGIE  +  G   +++L
Sbjct:  224 KMYRIDKRYGKDAYIVKQSVKAIQSEILKNGPVVASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIVRGSNDCGIEGTIAAGIVDTESL 342          
BLAST of CN189681 vs. ExPASy Swiss-Prot
Match: CPR1_CAEEL (Gut-specific cysteine proteinase OS=Caenorhabditis elegans GN=cpr-1 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.044e-28
Identity = 57/111 (51.35%), Postives = 72/111 (64.86%), Query Frame = -3
Query:  317 WRNSKPSSISAYRINFDPEDIMAEISKNGPVEVSFPVYEDFAHYKSGVYKPFPGDVMGGHAVKLIGWGTSDDGEDYWILVNQWNRSWGADGYFKIKRGSNECGIEEDVVVG 649
            +   K   +SAY +  +   I AEI  NGPVE +F VYEDF  YKSGVYK   G  +GGHA+K+IGWGT + G  YW++ N W  +WG  G+FKI RG ++CGIE  VV G
Sbjct:  216 YAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDFYKYKSGVYKHTAGKYLGGHAIKIIGWGT-ESGSPYWLVANSWGVNWGESGFFKIYRGDDQCGIESAVVAG 325          
The following BLAST results are available for this feature:
BLAST of CN189681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
CATB_PIG8.557e-3150.00Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CATB_RAT1.906e-3049.14Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CATB_MACFA3.252e-3046.72Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_HUMAN3.252e-3046.72Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
CATB_PONAB4.247e-3046.72Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CATB_MOUSE7.244e-3049.56Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CATB_BOVIN1.614e-2948.67Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5[more]
CATB_CHICK8.009e-2948.67Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1[more]
CYSP2_HAECO2.330e-2846.67Cathepsin B-like cysteine proteinase 2 OS=Haemonch... [more]
CPR1_CAEEL3.044e-2851.35Gut-specific cysteine proteinase OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002E03_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189681 ID=CN189681; Name=CN189681; organism=Citrus sinensis; type=EST; length=663bp
TTTTTTTTTTTTTTTTTGGAGCAATGAAGTGACATTTTTCATCTAAACGA
ATAATTCGGCGAGGAGAAACGAAGTTATTACAACTGGGTCTATTTTTACA
CACAACATTAAACTCCATTAATACATTCAATTATGCAAGACGGGAGCTTC
CCATTTCATGCCTTGATAGCTTAAGGTCAACGAAACACCCCTATAGCTAC
ACATTTGATATATAAAAAACAACATGAAGGGATAGCAAAGTCTGCTCTCA
AGCTGAAGCATCCTCAAACATATCTGCACTTGGAATCTCTTTGACAAGAT
TTTTGGATGAAGGGAAACCAACAACCACATCCTCTTCAATACCACACTCA
TTTGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATT
CCACTGATTAACGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCC
AACCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGGGAAGGGT
TTGTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATAAACTGGGAAGGA
AACTTCAACTGGGCCATTCTTGGAAATTTCTGCCATTATGTCCTCTGGAT
CAAAATTGATTCTATATGCACTAATACTGGAGGGCTTTGAATTCCTCCAA
AGCTGGGTTTTCT
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