DR908829

Overview
NameDR908829
Unique NameDR908829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.208e-38
Identity = 81/152 (53.29%), Postives = 97/152 (63.82%), Query Frame = 3
Query:   39 CLTENWGDLPLRVNDSEDMIIFNYLYDAVNSGWSPLDSTATSSVKAES----------VSDXXXXXXXXXXQKMCRGGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEPPPVRVT 464
            CLT+ WGDLPL+V+DSEDM+I+  L DA+ +GW+P + T+T  +KAE           V            Q +   GRHYRGVRQRPWGKFAAEIRDPAKNGARVWLG                + +RGSKALLNFPHRIG +EP PVR+T
Sbjct:   20 CLTDTWGDLPLKVDDSEDMVIYGLLSDALTAGWTPFNLTSTE-IKAEPREEIEPATIPVPSVAPPAETTTAQAVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLT 170          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.208e-38
Identity = 81/152 (53.29%), Postives = 97/152 (63.82%), Query Frame = 3
Query:   39 CLTENWGDLPLRVNDSEDMIIFNYLYDAVNSGWSPLDSTATSSVKAES----------VSDXXXXXXXXXXQKMCRGGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEPPPVRVT 464
            CLT+ WGDLPL+V+DSEDM+I+  L DA+ +GW+P + T+T  +KAE           V            Q +   GRHYRGVRQRPWGKFAAEIRDPAKNGARVWLG                + +RGSKALLNFPHRIG +EP PVR+T
Sbjct:   24 CLTDTWGDLPLKVDDSEDMVIYGLLSDALTTGWTPFNLTSTE-IKAEPREEIEPATSPVPSVAPPAETTTAQAVVPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLT 174          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.333e-38
Identity = 79/147 (53.74%), Postives = 93/147 (63.27%), Query Frame = 3
Query:   39 CLTENWGDLPLRVNDSEDMIIFNYLYDAVNSGWSPLDSTATS-----SVKAESVSDXXXXXXXXXXQKMCRGGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEPPPVRVT 464
            CLTE+WGDLPL+VNDSEDM+I+ +L DA + GW+P + T+         + E                +   GRHYRGVRQRPWGKFAAEIRDPAKNGARVWLG                F +RG+KALLNFPHRIG +EP PVRVT
Sbjct:   32 CLTESWGDLPLKVNDSEDMVIYGFLQDAFSIGWTPSNLTSEEVKLEPREEIEPAMSTSVSPPTVAPAALQPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRIGLNEPEPVRVT 178          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37
Identity = 80/145 (55.17%), Postives = 95/145 (65.52%), Query Frame = 3
Query:   39 CLTENWGDLPLRVNDSEDMIIFNYLYDAVNSGWSPLDSTA---TSSVKAESVSDXXXXXXXXXXQKMCRGGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEPPPVRVT 464
            CLTE WGDLPL+V+DSEDM+I+  L DA+N GWSP + +A    S  + E +             ++ RG RHYRGVR+RPWGKFAAEIRDPAKNGARVWLG                + +RGSKA LNFPHRIG +EP PVRVT
Sbjct:   33 CLTETWGDLPLKVDDSEDMVIYTLLKDALNVGWSPFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRG-RHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVT 176          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.379e-33
Identity = 74/156 (47.44%), Postives = 90/156 (57.69%), Query Frame = 3
Query:   39 CLTENWGDLPLRVNDSEDMIIFNYLYDAVNSGWSPLDSTATS------SVKAESVSDXXXXXXXXXXQKM---------CRGGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEPPPVRV 461
            C TE+WGDLPL+ NDSEDM+++  L DA + GW P  S++        SVK E+             ++             G+HYRGVRQRPWGKFAAEIRDPAKNGARVWLG                F +RGS+ALLNFP R+ S EP PVR+
Sbjct:   63 CFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRI 218          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 4.960e-31
Identity = 71/140 (50.71%), Postives = 82/140 (58.57%), Query Frame = 3
Query:   42 LTENWGDLPLRVNDSEDMIIFNYLYDAVNSGWSPLDSTATSSVKAESVSDXXXXXXXXXXQKMCRGGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEPPPVRV 461
            L +NW DLPL V+DS+DM I+N L DAV+SGW+P     TS  +                QK    G  YRGVR+RPWGKFAAEIRDP KNGARVWLG                F +RGSKA LNFPH IGS +  PVR+
Sbjct:   27 LNDNWSDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKASGSHAPRQK----GMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPVRI 162          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.105e-30
Identity = 72/151 (47.68%), Postives = 84/151 (55.63%), Query Frame = 3
Query:   33 SSCLTENWGDLPLRVNDSEDMIIFNYLYDAVNSGWSPLDSTATSSVKAESVSDXXXXXXXXXXQKMCRG-------GRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEPPPVRVT 464
            SSC TE+WG LPL+ NDSEDM+++  L DA +   S  D +      A  V             K            +HYRGVRQRPWGKFAAEIRDPAKNGARVWLG                F +RGS+ALLNFP R+ S EP PVR+T
Sbjct:   38 SSCFTESWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKPKKAIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRIT 188          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16
Identity = 46/104 (44.23%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  138 SPLDSTATSSVKAESVSDXXXXXXXXXXQKMCRGGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEPP 449
            S   S+ T+S + E+VS+           K     RHYRGVR+RPWGKFAAEIRDPAK G+R+WLG                F +RG KA+LNFP   G  + P
Sbjct:   77 SSSSSSTTTSPEVETVSNRKKT-------KRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAP 173          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.887e-16
Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = 3
Query:  243 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEP 446
            +HYRGVRQRPWGKFAAEIRDP K G+RVWLG                F +RGSKA+LNFP  +G  +P
Sbjct:  154 KHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKP 221          
BLAST of DR908829 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.311e-15
Identity = 39/69 (56.52%), Postives = 44/69 (63.77%), Query Frame = 3
Query:  243 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGXXXXXXXXXXXXXXXXFDIRGSKALLNFPHRIGSDEPP 449
            RHYRGVR+RPWGKFAAEIRDPAK G+R+WLG                F +RG KA+LNFP   G  E P
Sbjct:  108 RHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAP 176          
The following BLAST results are available for this feature:
BLAST of DR908829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
ERF2_TOBAC3.208e-3853.29Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF2_NICSY3.208e-3853.29Ethylene-responsive transcription factor 2 OS=Nico... [more]
ERF1_SOLLC9.333e-3853.74Ethylene-responsive transcription factor 1 OS=Sola... [more]
ERF1_TOBAC2.715e-3755.17Ethylene-responsive transcription factor 1 OS=Nico... [more]
EF100_ARATH2.379e-3347.44Ethylene-responsive transcription factor 1A OS=Ara... [more]
ERF99_ARATH4.960e-3150.71Ethylene-responsive transcription factor 13 OS=Ara... [more]
EF101_ARATH1.105e-3047.68Ethylene-responsive transcription factor 2 OS=Arab... [more]
EF107_ARATH5.887e-1644.23Ethylene-responsive transcription factor ERF107 OS... [more]
EF102_ARATH5.887e-1657.35Ethylene-responsive transcription factor 5 OS=Arab... [more]
EF106_ARATH1.311e-1556.52Ethylene-responsive transcription factor ERF106 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16957 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-40_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908829 ID=DR908829; Name=DR908829; organism=Citrus sinensis; type=EST; length=574bp
CAAGCTCCAATAAAAATGATGGTCTCGTGATCAGTTCTTGTTTAACAGAG
AACTGGGGAGACTTGCCGTTAAGAGTTAACGACTCCGAGGACATGATCAT
CTTCAACTACCTCTATGACGCCGTCAACTCAGGCTGGTCTCCGTTAGATT
CAACGGCAACGTCTAGCGTAAAAGCCGAGTCAGTAAGTGATAATTACAAA
AATAATAATAATATCAATAATCAGAAGATGTGTAGAGGAGGGAGGCACTA
TAGAGGAGTGAGGCAGAGGCCATGGGGTAAGTTCGCGGCTGAGATAAGGG
ACCCAGCTAAGAATGGAGCTAGGGTTTGGCTTGGAACTTACGAGACGGCT
GAGGAAGCTGCTCTGGCTTATGATCGAGCCGCTTTTGATATCCGTGGCTC
GAAGGCTCTGCTTAATTTTCCCCACAGGATTGGCTCCGACGAGCCTCCGC
CAGTCAGAGTTACGGCTAAGCGAAGTCATTCGGCTGACTCGGCGGCTGCG
GCTAAGAGGAGAAAAGATTCAGCGGCGGCTAAGGAGCATCAATTGACCAT
GCTGCCAGCTGGCGAGCACTTATT
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