CN189675
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189675 vs. ExPASy Swiss-Prot
Match: TMED_NEMVE (Transmembrane emp24 domain-containing protein OS=Nematostella vectensis GN=v1g194562 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.706e-13 Identity = 49/174 (28.16%), Postives = 86/174 (49.43%), Query Frame = -3 Query: 218 EECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHETIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 733 EECF H+ G + F V A+ + +D+ + GP I+ + S K+ F AH G + +CF+NK + + + F + +G + + L E +S+L EA+ ++ EQ ++E + +N+ + R V+ +F+ES LV ++ QVY L+R FE Sbjct: 32 EECF-HDKVTSGTKMGLIFEV--AEGGFLD----IDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMTPKVLKFSMDIGEAPKDTSKEDNAGHDKLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSINDNTNSRVVWWSFFESLVLVAMTLGQVYYLKRFFE 198
BLAST of CN189675 vs. ExPASy Swiss-Prot
Match: TMED2_RAT (Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus GN=Tmed2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.788e-12 Identity = 39/140 (27.86%), Postives = 75/140 (53.57%), Query Frame = -3 Query: 218 VDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHETIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 631 +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + + + F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ + R V +F+E+ LV ++ Q+Y L+R FE Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 196
BLAST of CN189675 vs. ExPASy Swiss-Prot
Match: TMED2_MOUSE (Transmembrane emp24 domain-containing protein 2 OS=Mus musculus GN=Tmed2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.788e-12 Identity = 39/140 (27.86%), Postives = 75/140 (53.57%), Query Frame = -3 Query: 218 VDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHETIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 631 +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + + + F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ + R V +F+E+ LV ++ Q+Y L+R FE Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 196
BLAST of CN189675 vs. ExPASy Swiss-Prot
Match: TMED2_HUMAN (Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens GN=TMED2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.788e-12 Identity = 39/140 (27.86%), Postives = 75/140 (53.57%), Query Frame = -3 Query: 218 VDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHETIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 631 +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + + + F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ + R V +F+E+ LV ++ Q+Y L+R FE Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 196
BLAST of CN189675 vs. ExPASy Swiss-Prot
Match: TMED2_CRIGR (Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus GN=TMED2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.788e-12 Identity = 39/140 (27.86%), Postives = 75/140 (53.57%), Query Frame = -3 Query: 218 VDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHETIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMSRRAVYKAFWESTALVGASVLQVYLLRRLFE 631 +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + + + F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ + R V +F+E+ LV ++ Q+Y L+R FE Sbjct: 52 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFE 191 The following BLAST results are available for this feature:
BLAST of CN189675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189675 ID=CN189675; Name=CN189675; organism=Citrus sinensis; type=EST; length=765bpback to top |