CN189673

Overview
NameCN189673
Unique NameCN189673
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189673 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.152e-57
Identity = 104/170 (61.18%), Postives = 129/170 (75.88%), Query Frame = -2
Query:  224 KAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDG----NMDMEEKFGLTIQKAQPLRVVPV 721
            KA+ E++ ++G+   +EESDI+ LPYLQAVVKETFRLHPA PLL+ RK   DVE+  F VPK  QVFVNVWAIGRD N+W+N   F PERFLG DI  +G+++EL PFG GRRICPGLPLA++ + LML SL+ SFDWKL +G    ++DM+E FGLT+ K  PL  VPV
Sbjct:  337 KAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAVPV 506          
BLAST of CN189673 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.013e-56
Identity = 99/170 (58.24%), Postives = 131/170 (77.06%), Query Frame = -2
Query:  224 KAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDG----NMDMEEKFGLTIQKAQPLRVVPV 721
            KA+ E+++++G+ + ++ESDI+ LPYLQAVVKETFRLHPA PLL+ RK   DVE+  F VPK  QV VNVWAIGRD ++W+NP  F PERF+G DI  KG+++EL PFGGGRRICPGLPLA++ + LML SL+ SFDWKL +G    ++DM+E FG+T+ +   L  +PV
Sbjct:  336 KAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGITLHRTNTLYAIPV 505          
BLAST of CN189673 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.787e-54
Identity = 101/170 (59.41%), Postives = 126/170 (74.12%), Query Frame = -2
Query:  224 KAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDG----NMDMEEKFGLTIQKAQPLRVVPV 721
            KA+ E++ ++G+   +EESDI++LPYLQAVVKETFRLH  VPLLI RK   D EI  F V K  QV VNVWAIGRD ++WDNP  F PERFLG D+  +G+++EL PFG GRRICPG+PLA++ + LML SL+ SFDWKL  G    ++DM+E FGLT+ K  PL  VPV
Sbjct:  336 KAQAEIDCVIGQNGIVEESDISKLPYLQAVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHAVPV 505          
BLAST of CN189673 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 5.118e-51
Identity = 97/170 (57.06%), Postives = 126/170 (74.12%), Query Frame = -2
Query:  224 KAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----GNMDMEEKFGLTIQKAQPLRVVPV 721
            KA+ E+ Q++G+   ++ESDI  LPYLQA+VKET RLHPA PL I RK   DV+I  F VPK  QV VNVWAIGRD ++W+NP  F PERFL  +   KG++FELIPFG GRR+CPG+ +A++ +H++L SL+ SFDWKL++    GN+DM E FGLT+ KA+ L  VPV
Sbjct:  338 KAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKETLRLHPAAPL-IPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVPV 506          
BLAST of CN189673 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.118e-51
Identity = 94/172 (54.65%), Postives = 126/172 (73.26%), Query Frame = -2
Query:  218 KAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----GNMDMEEKFGLTIQKAQPLRVVPVAI 721
            KAK ELE+++G+G+ ++E D+ RLPYL  +VKE  RLHP  PLL+ RKV   VE++ +T+P G  VFVN WAIGRD  +WD+   F P+RFL S +  +G +F+LIPFG GRRICPG+PLA RM+ +MLGSL+N+FDWK++       +DM EK G TI KA+PL VVP+ +
Sbjct:  318 KAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVVPIPL 489          
BLAST of CN189673 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 92/169 (54.44%), Postives = 116/169 (68.64%), Query Frame = -2
Query:  227 KAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDG----NMDMEEKFGLTIQKAQPLRVVP 721
            K KLE+ Q++G     EE DI  LPY+QAV+KE  RLHP +PLLI RK  +D +   + +PKG QV VN WAIGRD   WDNP  F PERFL S +  KGQN+ELIPFG GRR+C GLPL  RM+H   GSL++ FDW+L       +++MEE  G+T +K QPL+V+P
Sbjct:  296 KVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPLKVIP 464          
BLAST of CN189673 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.884e-45
Identity = 83/170 (48.82%), Postives = 122/170 (71.76%), Query Frame = -2
Query:  224 KAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDG----NMDMEEKFGLTIQKAQPLRVVPV 721
            KA+ E+ +++   + I E DI RL YL+ V+KETFR++P VPLLI R+ S+DV+I  + +PK   + VN+WAI R+ N+W +P +F+PERF+ S I YKG NFEL+PFG GRRICPG+ + + ++HL L +L+  FDWKL +G    ++D+EE +GL   K  PL+++PV
Sbjct:  322 KAQAEVREVIKHKDDIIEEDIERLQYLKMVIKETFRINPLVPLLIPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLIPV 491          
BLAST of CN189673 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.213e-45
Identity = 86/169 (50.89%), Postives = 113/169 (66.86%), Query Frame = -2
Query:  227 KAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDG----NMDMEEKFGLTIQKAQPLRVVP 721
            K K E+ Q +      E+SDI  LPY+QAV+KE+ RLHP +P LI R+  +D +   + VPK  QV VN WAIGRD   WD+P SF PERFLGS I  KGQ++ LIPFG GRR+C GLPL  RM+H  LGSL+  F+W+L DG    +++M+   G+T +K   L+V+P
Sbjct:  334 KVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVIP 502          
BLAST of CN189673 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.595e-44
Identity = 85/169 (50.30%), Postives = 118/169 (69.82%), Query Frame = -2
Query:  227 KAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDG----NMDMEEKFGLTIQKAQPLRVVP 721
            K + EL+++VGR + ++ES  + LPYLQA VKET RL+P + ++I  +  E  ++  +T+PKG  V VN  AIGRD   W +P  F PERFL SDI Y G+ F+ IPFG GRRICPG PLA+R++ L+L SL+++F W+L DG     +DMEE F L++  A+PLRV+P
Sbjct:  315 KLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIP 483          
BLAST of CN189673 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.914e-44
Identity = 81/170 (47.65%), Postives = 120/170 (70.59%), Query Frame = -2
Query:  224 KAKLELEQLVGRGNPIEESDITRLPYLQAVVKETFRLHPAVPLLIARKVSEDVEIASFTVPKGGQVFVNVWAIGRDENIWDNPHSFVPERFLGSDISYKGQNFELIPFGGGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDG----NMDMEEKFGLTIQKAQPLRVVPV 721
            KA+ E+ +++   + I E DI RL YL+ VVKETFR+ P VPLLI R+ S+DV+I  + +PK   + VN+WAI R+ N+W +P +F+PERF+ + I YKG NFE +PFG GRR+CPG+ + + ++HL L +L+  FDWKL +G    ++D+EE +GL   K  PL+++PV
Sbjct:  322 KAQAEVREVIKNKDDIIEEDIERLEYLKMVVKETFRVLPLVPLLIPREASKDVKIGGYDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLQLIPV 491          
The following BLAST results are available for this feature:
BLAST of CN189673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 465
Match NameE-valueIdentityDescription
C76C2_ARATH8.152e-5761.18Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH9.013e-5658.24Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH3.787e-5459.41Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH5.118e-5157.06Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU5.118e-5154.657-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76A1_SOLME1.261e-4954.44Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C71BC_ARATH1.884e-4548.82Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C76A2_SOLME3.213e-4550.89Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C80A1_BERST1.595e-4450.30Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71BB_ARATH7.914e-4447.65Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0002D20_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002D20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189673 ID=CN189673; Name=CN189673; organism=Citrus sinensis; type=EST; length=722bp
CCCAAACACGTTCCTTTGTATTCAAGTGTCACATATTTTTTGCTTACATA
TTGATCCACTCATAAATGTGGATTAAGGTGATCATTTAGATAATTGCTCA
TAAATAATAAGAACAATGATAAACAACAATGATGAATAAATACTAACGAC
AAAGTGCTTTATTGGTTACAATTGAGTGCACTCCAACGGGATGGAAAATT
AACTATACTGAGGACTAAATGGCAACAGGGACAACACGAAGGGGTTGAGC
CTTCTGTATAGTGAGGCCAAATTTCTCTTCCATGTCCATGTTCCCATCTT
CAAGCTTCCAATCAAAAGAATTAATAAGTGAACCGAGCATTAGATGTAAC
ATTCTGATTGCCAATGGCAAACCCGGACAAATGCGCCGCCCACCTCCGAA
GGGAATTAGCTCAAAATTTTGGCCTTTGTAAGAAATATCTGACCCCAAAA
ATCTTTCGGGTACAAAAGAGTGAGGATTGTCCCATATGTTTTCATCTCTA
CCAATAGCCCATACGTTAACAAAAACTTGCCCACCTTTCGGCACTGTGAA
GCTTGCAATTTCAACATCTTCAGAGACTTTGCGGGCGATTAATAAAGGAA
CTGCCGGGTGCAACCTAAAAGTTTCTTTAACAACTGCTTGTAGATAAGGT
AACCGAGTGATGTCAGATTCTTCAATTGGGTTGCCTCTGCCAACCAGTTG
TTCTAACTCCAATTTTGCTTTC
back to top