CN189654

Overview
NameCN189654
Unique NameCN189654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189654 vs. ExPASy Swiss-Prot
Match: SCRK4_ARATH (Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 7.862e-36
Identity = 73/96 (76.04%), Postives = 84/96 (87.50%), Query Frame = -3
Query:  260 LLLVPLGEHGCRFYTKSFKGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVLEDETRLREILKFANACGAITTPKKGAIPALPPEFEALNLLKG 547
            LLLV LGE GCR+YTKSF+G+VD FHV+ VDTTGAGD+FVGALL K+VDD++VLEDE RLRE+L+ ANACGAITT KKGAIPALP E E  +LLKG
Sbjct:  230 LLLVTLGEKGCRYYTKSFRGSVDPFHVDAVDTTGAGDSFVGALLCKIVDDRAVLEDEARLREVLRLANACGAITTTKKGAIPALPTESEVQSLLKG 325          
BLAST of CN189654 vs. ExPASy Swiss-Prot
Match: SCRK1_ARATH (Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.902e-35
Identity = 71/95 (74.74%), Postives = 83/95 (87.37%), Query Frame = -3
Query:  263 LLLVPLGEHGCRFYTKSFKGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVLEDETRLREILKFANACGAITTPKKGAIPALPPEFEALNLLK 547
            LLLV LGE GCR+YTK+FKGAVD FHVN VDTTGAGD+FVGALL ++VDD+SVLEDE RLR++L+FANACGAITT KKGAIPALP + E  + L+
Sbjct:  229 LLLVTLGEKGCRYYTKTFKGAVDPFHVNAVDTTGAGDSFVGALLNQIVDDRSVLEDEERLRKVLRFANACGAITTTKKGAIPALPSDAEVRSFLE 323          
BLAST of CN189654 vs. ExPASy Swiss-Prot
Match: SCRK2_ARATH (Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.655e-35
Identity = 70/95 (73.68%), Postives = 84/95 (88.42%), Query Frame = -3
Query:  263 LLLVPLGEHGCRFYTKSFKGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVLEDETRLREILKFANACGAITTPKKGAIPALPPEFEALNLLK 547
            LLLV LGE+GCR+YTK F G+V+ FHV+ VDTTGAGD+FVGALL ++VDDQSVLE+E RLR++L+FANACGAITT KKGAIPALP + EAL+ LK
Sbjct:  231 LLLVTLGENGCRYYTKDFHGSVETFHVDAVDTTGAGDSFVGALLNQIVDDQSVLEEEERLRKVLRFANACGAITTTKKGAIPALPTDCEALSFLK 325          
BLAST of CN189654 vs. ExPASy Swiss-Prot
Match: SCRK_SOLTU (Fructokinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.314e-34
Identity = 70/96 (72.92%), Postives = 80/96 (83.33%), Query Frame = -3
Query:  260 LLLVPLGEHGCRFYTKSFKGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVLEDETRLREILKFANACGAITTPKKGAIPALPPEFEALNLLKG 547
            LLLV LGE GC +YTK F G+V  FHV  VDTTGAGD+FVGALL K+VDDQ++LEDE RL+E+L+F+ ACGAITT KKGAIPALP E EAL LLKG
Sbjct:  222 LLLVTLGEKGCNYYTKKFHGSVGGFHVKTVDTTGAGDSFVGALLTKIVDDQAILEDEARLKEVLRFSCACGAITTTKKGAIPALPTESEALTLLKG 317          
BLAST of CN189654 vs. ExPASy Swiss-Prot
Match: SCRK3_ARATH (Probable fructokinase-3 OS=Arabidopsis thaliana GN=At1g06020 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.314e-34
Identity = 69/95 (72.63%), Postives = 82/95 (86.32%), Query Frame = -3
Query:  263 LLLVPLGEHGCRFYTKSFKGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVLEDETRLREILKFANACGAITTPKKGAIPALPPEFEALNLLK 547
            LLLV LGE GC ++TK F G+V+ FHV+ VDTTGAGD+FVGALL ++VDDQSVLEDE RLR++L+FANACGAITT KKGAIPALP + EAL+ LK
Sbjct:  230 LLLVTLGEKGCTYFTKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAITTTKKGAIPALPTDIEALSFLK 324          
BLAST of CN189654 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLLC (Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33
Identity = 69/96 (71.88%), Postives = 78/96 (81.25%), Query Frame = -3
Query:  260 LLLVPLGEHGCRFYTKSFKGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVLEDETRLREILKFANACGAITTPKKGAIPALPPEFEALNLLKG 547
            LLLV LGE GC +YTK F G V  FHV  VDTTGAGD+FVGALL K+VDDQ++LEDE RL+E+L+F+ ACGAITT KKGAIPALP   EAL LLKG
Sbjct:  231 LLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILEDEARLKEVLRFSCACGAITTTKKGAIPALPTASEALTLLKG 326          
BLAST of CN189654 vs. ExPASy Swiss-Prot
Match: SCRK2_SOLHA (Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.388e-32
Identity = 68/96 (70.83%), Postives = 77/96 (80.21%), Query Frame = -3
Query:  260 LLLVPLGEHGCRFYTKSFKGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVLEDETRLREILKFANACGAITTPKKGAIPALPPEFEALNLLKG 547
            LLLV LGE GC +YTK F G V  FHV  VDTTGAGD+FVGALL K+VDDQ++L DE RL+E+L+F+ ACGAITT KKGAIPALP   EAL LLKG
Sbjct:  231 LLLVTLGEKGCNYYTKKFHGTVGGFHVKTVDTTGAGDSFVGALLTKIVDDQTILADEARLKEVLRFSCACGAITTTKKGAIPALPTASEALTLLKG 326          
BLAST of CN189654 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSJ (Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.074e-28
Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = -3
Query:  257 LLLVPLGEHGCRFYTKSFKGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVLEDETRLREILKFANACGAITTPKKGAIPALPPEFEALNLLKGA 547
            LLLV LG+ GC++Y + F+GAV ++ V  VDTTGAGDAFVGALL ++V D S L+D+ +L E +KFANACGAIT  KKGAIP+LP E E L L++ A
Sbjct:  227 LLLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLMESA 323          
BLAST of CN189654 vs. ExPASy Swiss-Prot
Match: SCRK1_ORYSI (Fructokinase-1 OS=Oryza sativa subsp. indica GN=FRK1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.074e-28
Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = -3
Query:  257 LLLVPLGEHGCRFYTKSFKGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVLEDETRLREILKFANACGAITTPKKGAIPALPPEFEALNLLKGA 547
            LLLV LG+ GC++Y + F+GAV ++ V  VDTTGAGDAFVGALL ++V D S L+D+ +L E +KFANACGAIT  KKGAIP+LP E E L L++ A
Sbjct:  227 LLLVTLGDQGCKYYARDFRGAVPSYKVQQVDTTGAGDAFVGALLRRIVQDPSSLQDQKKLEEAIKFANACGAITATKKGAIPSLPTEVEVLKLMESA 323          
BLAST of CN189654 vs. ExPASy Swiss-Prot
Match: SCRK1_MAIZE (Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.074e-28
Identity = 62/97 (63.92%), Postives = 75/97 (77.32%), Query Frame = -3
Query:  257 LLLVPLGEHGCRFYTKSFKGAVDAFHVNPVDTTGAGDAFVGALLGKLVDDQSVLEDETRLREILKFANACGAITTPKKGAIPALPPEFEALNLLKGA 547
            LLLV LG+ GC++Y + F GAV +F V  VDTTGAGDAFVGALL ++V D S L+DE +L E +KFANACGAITT KKGAIP+LP E E L L++ A
Sbjct:  227 LLLVTLGDQGCKYYARDFHGAVPSFKVQQVDTTGAGDAFVGALLQRIVKDPSSLQDEKKLVESIKFANACGAITTTKKGAIPSLPTEAEVLQLIEKA 323          
The following BLAST results are available for this feature:
BLAST of CN189654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
SCRK4_ARATH7.862e-3676.04Probable fructokinase-4 OS=Arabidopsis thaliana GN... [more]
SCRK1_ARATH3.902e-3574.74Probable fructokinase-1 OS=Arabidopsis thaliana GN... [more]
SCRK2_ARATH6.655e-3573.68Probable fructokinase-2 OS=Arabidopsis thaliana GN... [more]
SCRK_SOLTU4.314e-3472.92Fructokinase OS=Solanum tuberosum PE=2 SV=1[more]
SCRK3_ARATH4.314e-3472.63Probable fructokinase-3 OS=Arabidopsis thaliana GN... [more]
SCRK2_SOLLC2.796e-3371.88Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=... [more]
SCRK2_SOLHA1.388e-3270.83Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=... [more]
SCRK1_ORYSJ2.074e-2860.82Fructokinase-1 OS=Oryza sativa subsp. japonica GN=... [more]
SCRK1_ORYSI2.074e-2860.82Fructokinase-1 OS=Oryza sativa subsp. indica GN=FR... [more]
SCRK1_MAIZE2.074e-2863.92Fructokinase-1 OS=Zea mays GN=FRK1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002D09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189654 ID=CN189654; Name=CN189654; organism=Citrus sinensis; type=EST; length=549bp
TTTTTTTTTTTTTTTTTCACGAGAAACGATAGTTTTATTCGCTAAAGCAG
AGCAGCAGCCTTCAAAGTTCAAAGCTCAAGTCTTCGATCATTACAAATAG
GGAAAAACAAGTAACCCAAATATTGAAAAATAATAATAATACAGAAGAAA
CCCCCTTCTTTTCATTGAATTCAAAGCAACTTCCGCAAAAACAAAAAGAA
AATTCAAAATACAAACAAAAAAAAAAATTTGGAACTAATAATTTTGTTTA
TTATTATGCTCCTTTGAGTAAGTTGAGAGCTTCAAACTCTGGGGGTAAAG
CTGGAATTGCTCCCTTCTTGGGGGTAGTGATGGCTCCACAGGCATTTGCA
AATTTCAATATCTCCCGCAACCTTGTTTCATCCTCAAGAACAGATTGGTC
ATCAACAAGCTTCCCTAAAAGAGCACCAACAAATGCATCACCGGCGCCGG
TTGTATCTACGGGGTTCACATGAAAAGCATCCACTGCTCCTTTGAAACTC
TTAGTGTAGAATCTACAGCCATGCTCACCAAGGGGGACCAAAAGGAGTT
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