EY679058

Overview
NameEY679058
Unique NameEY679058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length424
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679058 vs. ExPASy Swiss-Prot
Match: YB83_SCHPO (LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe GN=SPBC29A3.03c PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12
Identity = 27/53 (50.94%), Postives = 43/53 (81.13%), Query Frame = 3 
Query:   12 EQTSDDNPPMIMSCGHVLCRQSINKMSKNHSRTFKCPYCPSDIDAAQCRQLYF 170
            EQ +++NPPM+MSCGHV+ ++S+ ++S+N S+ FKCPYCP++  AA   ++YF
Sbjct:  346 EQATEENPPMMMSCGHVIVKESLRQLSRNGSQRFKCPYCPNENVAADAIRVYF 398
The following BLAST results are available for this feature:
BLAST of EY679058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YB83_SCHPO2.303e-1250.94LisH domain-containing protein C29A3.03c OS=Schizo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-F08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679058 ID=EY679058; Name=EY679058; organism=Citrus sinensis; type=EST; length=424bp
CCACGCGTCCGGAGCAAACGTCTGACGATAACCCTCCAATGATCATGTCC
TGCGGCCATGTGCTCTGCCGGCAGTCAATTAACAAAATGTCAAAGAACCA
CTCAAGGACATTCAAGTGCCCATACTGTCCATCTGATATTGATGCAGCAC
AGTGTCGGCAGCTGTATTTCTGATGCATGCCATGCCTTGATATGTACAAT
GGGTTGTATTTAACACTTGCCTTTCTTGTCTGAACAAACTTTTTTAGGTT
TAGAAGAATCTGATGTTGTGTTATTTTGTATTGTGTTGTCTTATGTAGCC
AGGGGTAGCGTATGATGCTGGTGGCTGCAAAAAGCTGGTCTGTTGTATAA
CTGTTAAATGATACATTTGTTGTAAATAGAAATTCTTTCCGCATTGCATT
CAAAAAAAAAAAAAAAAAAAAAAA
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