DR908800

Overview
NameDR908800
Unique NameDR908800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908800 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein of 80 kDa OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.606e-59
Identity = 42/64 (65.62%), Postives = 51/64 (79.69%), Query Frame = 3
Query:   48 TGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFDMEQGLPVLPKWLFFNRVNAHARKGVDISHAR 239
            T SGK HD+ ++AK ES+YTGSG+ GS+MF F+MEQGLPVLP+WL FNRV   ARKG+ I  AR
Sbjct:  542 TASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCFNRVTGRARKGIHIGPAR 605          

HSP 2 Score: 81.6481 bits (200), Expect = 6.606e-59
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = 2
Query:  446 PGDPAGARLKPGSGYGHGFGIRVDSPLGPLGLEYAFNDRQTRRF 577
            PGDPAGARLKPGSGYG+G G+RVDSPLGPL LEYAFND+   RF
Sbjct:  681 PGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEYAFNDQHAGRF 724          

HSP 3 Score: 80.1073 bits (196), Expect = 6.606e-59
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 1
Query:  256 FYPHEAFAIGGTNSVRGYEEXXXXXXXXXXXXXXEITFPMLGPAEGVIFSDHGTELGSGPTVP 444
            F PHEAF IGGTNSVRGYEE              E++FP+ GP EGVIF+D+GT++GSG TVP
Sbjct:  619 FSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELSFPVRGPVEGVIFTDYGTDMGSGSTVP 681          

HSP 4 Score: 33.8834 bits (76), Expect = 6.606e-59
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 2
Query:    2 EKGNPIIKDFYSSPL 46
            E+GNPIIKDFYSSPL
Sbjct:  527 EQGNPIIKDFYSSPL 541          
BLAST of DR908800 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSI (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.892e-55
Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = 3
Query:   48 TGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFDMEQGLPVLPKWLFFNRVNAHARKGVDISHARLRL 248
            T SG  +DD L+AK ESVYT SG+  S+MFVF++EQGLP+LP+WL FNRV A  R+G +I  ARL L
Sbjct:  475 TASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLL 541          

HSP 2 Score: 83.5741 bits (205), Expect = 4.892e-55
Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 2
Query:  446 PGDPAGARLKPGSGYGHGFGIRVDSPLGPLGLEYAFNDRQTRRF 577
            PGDPAGAR KPGSGYG+G GIRVDSPLGPL LEYAFND+Q RRF
Sbjct:  614 PGDPAGARGKPGSGYGYGVGIRVDSPLGPLRLEYAFNDKQARRF 657          

HSP 3 Score: 76.6406 bits (187), Expect = 4.892e-55
Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 1
Query:  253 NFYPHEAFAIGGTNSVRGYEEXXXXXXXXXXXXXXEITFPMLGPAEGVIFSDHGTELGSGPTVP 444
            NF PHEAFAIGGTNSVRGYEE              E++  M GP EGV+F D+G++L SGP VP
Sbjct:  551 NFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGVVFGDYGSDLSSGPKVP 614          

HSP 4 Score: 28.8758 bits (63), Expect = 4.892e-55
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 2
Query:    2 EKGNPIIKDFYSSPL 46
            +KGNPII+DFY+S L
Sbjct:  460 DKGNPIIRDFYNSQL 474          
BLAST of DR908800 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.357e-55
Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = 3
Query:   48 TGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFDMEQGLPVLPKWLFFNRVNAHARKGVDISHARLRL 248
            T SG  +DD L+AK ESVYT SG+  S+MFVF++EQGLP+LP+WL FNRV A  R+G +I  ARL L
Sbjct:  475 TASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSFNRVTARLRQGYEIGPARLLL 541          

HSP 2 Score: 83.1889 bits (204), Expect = 6.357e-55
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 2
Query:  446 PGDPAGARLKPGSGYGHGFGIRVDSPLGPLGLEYAFNDRQTRRF 577
            PGDPAGAR KPGSGYG+G G+RVDSPLGPL LEYAFND+Q RRF
Sbjct:  614 PGDPAGARGKPGSGYGYGVGVRVDSPLGPLRLEYAFNDKQARRF 657          

HSP 3 Score: 76.6406 bits (187), Expect = 6.357e-55
Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 1
Query:  253 NFYPHEAFAIGGTNSVRGYEEXXXXXXXXXXXXXXEITFPMLGPAEGVIFSDHGTELGSGPTVP 444
            NF PHEAFAIGGTNSVRGYEE              E++  M GP EGV+F D+G++L SGP VP
Sbjct:  551 NFSPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEVSCRMFGPLEGVVFGDYGSDLSSGPKVP 614          

HSP 4 Score: 28.8758 bits (63), Expect = 6.357e-55
Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 2
Query:    2 EKGNPIIKDFYSSPL 46
            +KGNPII+DFY+S L
Sbjct:  460 DKGNPIIRDFYNSQL 474          
The following BLAST results are available for this feature:
BLAST of DR908800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
OEP80_ARATH6.606e-5965.63Outer envelope protein of 80 kDa OS=Arabidopsis th... [more]
OEP80_ORYSI4.892e-5561.19Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
OEP80_ORYSJ6.357e-5561.19Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16928 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-34_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908800 ID=DR908800; Name=DR908800; organism=Citrus sinensis; type=EST; length=578bp
TGAAAAAGGAAATCCTATTATCAAGGATTTCTATAGCAGTCCTCTTTACA
GGAAGTGGAAAGACCCATGATGATGTGTTAATTGCTAAATTTGAGAGTGT
ATATACTGGTTCTGGCAATCACGGTTCTTCAATGTTTGTATTCGACATGG
AACAAGGGCTTCCTGTTTTGCCAAAGTGGTTGTTCTTCAATAGAGTGAAT
GCTCATGCCAGAAAGGGTGTAGATATAAGTCATGCTCGCCTTCGTTTAAA
GTAATTTCTATCCTCATGAAGCATTTGCCATTGGCGGAACAAATAGTGTG
AGAGGTTATGAAGAAGGTGCAGTGGGCTCTGGTCGATCTTACGTGGTTGG
CTCTGGCGAGATCACTTTTCCGATGTTGGGGCCAGCAGAAGGAGTTATCT
TTTCTGACCATGGAACAGAACTTGGATCAGGCCCTACTGTGCCCGCCCGG
TGATCCTGCTGGAGCAAGGTTGAAGCCTGGAAGTGGGTATGGACATGGGT
TTGGCATCCGTGTTGATTCTCCTCTGGGACCTTTGGGACTTGAGTATGCA
TTTAATGACAGGCAGACAAGGAGATTTC
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