DR908796

Overview
NameDR908796
Unique NameDR908796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908796 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 1.292e-95
Identity = 172/192 (89.58%), Postives = 185/192 (96.35%), Query Frame = 2
Query:    2 HLIAPEQGYRRLIESSVVTIRGPAEAAVDAVHALLKELVHKAISETPELKQYPALRAEVGNAAIESLERMRDTSKKATLQLVDMECSYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTELGKLEQKRLSNLLNEDPAVMERRSALA 577
            HLIAPEQGYRRLIESS++TIRGPAEAAVDAVH+LLK+LVHKAISET +LKQYP LR EVG AA++SLERMRD SK+ATLQLVDMEC YLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTT+LSYVNMVCA+LRNSIPKSIVYCQVREAKRSLLDHFFTELGK+E KRLS+LLNEDPA+MERRSALA
Sbjct:  399 HLIAPEQGYRRLIESSLITIRGPAEAAVDAVHSLLKDLVHKAISETLDLKQYPGLRVEVGAAAVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSALA 590          
BLAST of DR908796 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 7.838e-93
Identity = 167/192 (86.98%), Postives = 184/192 (95.83%), Query Frame = 2
Query:    2 HLIAPEQGYRRLIESSVVTIRGPAEAAVDAVHALLKELVHKAISETPELKQYPALRAEVGNAAIESLERMRDTSKKATLQLVDMECSYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTELGKLEQKRLSNLLNEDPAVMERRSALA 577
            HLIAPEQGYRRLIESS++TIRGPAE+AVDAVH+LLK+LVHKA+SET +LKQYP LR EVG A+++SLERMRD SK+ATLQLVDMEC YLTVDFFRKLPQDVDKGGNPTHSI DRYNDSYLRRIGTT+LSYVNMVCA+LR+SIPKSIVYCQVREAKRSLLDHFFTELGK+E KRLS+LLNEDPA+MERRSALA
Sbjct:  399 HLIAPEQGYRRLIESSLITIRGPAESAVDAVHSLLKDLVHKAMSETLDLKQYPGLRVEVGAASVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQDVDKGGNPTHSICDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLNEDPAIMERRSALA 590          
BLAST of DR908796 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3)

HSP 1 Score: 334.339 bits (856), Expect = 2.521e-91
Identity = 163/192 (84.90%), Postives = 182/192 (94.79%), Query Frame = 2
Query:    2 HLIAPEQGYRRLIESSVVTIRGPAEAAVDAVHALLKELVHKAISETPELKQYPALRAEVGNAAIESLERMRDTSKKATLQLVDMECSYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTELGKLEQKRLSNLLNEDPAVMERRSALA 577
            HLIAPEQGYRRLIESS+V+IRGPAEA+VD VHA+LK+LVHK+++ET ELKQYPALR EV NAAIESL++MR+ SKKATLQLVDMECSYLTVDFFRKLPQDV+KGGNPTHSIFDRYNDSYLRRIG+ VLSYVNMVCA LRNSIPKSIVYCQVREAKRSLLDHFF ELG ++ KRLS+LLNEDPA+MERRSA++
Sbjct:  399 HLIAPEQGYRRLIESSIVSIRGPAEASVDTVHAILKDLVHKSVNETVELKQYPALRVEVTNAAIESLDKMREGSKKATLQLVDMECSYLTVDFFRKLPQDVEKGGNPTHSIFDRYNDSYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLNEDPAIMERRSAIS 590          
BLAST of DR908796 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 1.638e-82
Identity = 149/192 (77.60%), Postives = 172/192 (89.58%), Query Frame = 2
Query:    2 HLIAPEQGYRRLIESSVVTIRGPAEAAVDAVHALLKELVHKAISETPELKQYPALRAEVGNAAIESLERMRDTSKKATLQLVDMECSYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTELGKLEQKRLSNLLNEDPAVMERRSALA 577
            HLIAPEQGYRRLIES +V+IRGPAEAAVDAVH++LK+L+HK++ ET ELKQYP LR EV  AA++SL+RMRD S+KATL LVDME  YLTV+FFRKLPQD +KGGNPTHSIFDRYND+YLRRIG+ VLSYVNMVCA LRNSIPKSIVYCQVREAKRSLLD FFTELG+ E  +LS LL+EDPAV +RR+++A
Sbjct:  399 HLIAPEQGYRRLIESCLVSIRGPAEAAVDAVHSILKDLIHKSMGETSELKQYPTLRVEVSGAAVDSLDRMRDESRKATLLLVDMESGYLTVEFFRKLPQDSEKGGNPTHSIFDRYNDAYLRRIGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQRRTSIA 590          
BLAST of DR908796 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 3.675e-58
Identity = 113/196 (57.65%), Postives = 153/196 (78.06%), Query Frame = 2
Query:    2 HLIAPEQGYRRLIESSVVTIRGPAEAAVDAVHALLKELVHKAISETPELKQYPALRAEVGNAAIESLERMRDTSKKATLQLVDMECSYLTVDFFRKLPQDVDK-GGNPTHS---IFDRYNDSYLRRIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTELGKLEQKRLSNLLNEDPAVMERRSALA 577
            HLIAPEQGYRRLI+ S+   +GPAEA VDAVH +LKELV K+ISET ELK++P L +++  AA E+LER RD S+K  L+LVDME SYLTV+FFRKL  + +K   NP ++     D Y+D++ R+IG+ V +Y+NMVC +LRNS+PK++VYCQVREAKRSLL+ F+ ++G+ E+++L  +L+EDP +MERR  LA
Sbjct:  400 HLIAPEQGYRRLIDGSISYFKGPAEATVDAVHFVLKELVRKSISETEELKRFPTLASDIAAAANEALERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEKEKPNPRNAPAPNADPYSDNHFRKIGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLMERRGTLA 595          
BLAST of DR908796 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.182e-56
Identity = 108/196 (55.10%), Postives = 151/196 (77.04%), Query Frame = 2
Query:    2 HLIAPEQGYRRLIESSVVTIRGPAEAAVDAVHALLKELVHKAISETPELKQYPALRAEVGNAAIESLERMRDTSKKATLQLVDMECSYLTVDFFRKLPQDVDK--------GGNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTELGKLEQKRLSNLLNEDPAVMERR 565
            HLIAPEQGYRRLIE ++   RGPAEA+VDAVH +LKELV K+ISET ELK++P+L+ E+  AA  SLE+ R+ SKK+ ++LVDME +YLT +FFRKLPQ++++          +P+ +  D+Y D + RRI + V +YVNMV  +LRN+IPK+ VYCQVR+AK +LL++F++++ K E K+L  LL+EDPA+M+RR
Sbjct:  405 HLIAPEQGYRRLIEGALGYFRGPAEASVDAVHYVLKELVRKSISETEELKRFPSLQVELAAAANSSLEKFREESKKSVIRLVDMESAYLTAEFFRKLPQEIERPVTNSKNQTASPSSATLDQYGDGHFRRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLLDEDPALMDRR 600          
BLAST of DR908796 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 5.683e-51
Identity = 104/194 (53.61%), Postives = 145/194 (74.74%), Query Frame = 2
Query:    2 HLIAPEQGYRRLIESSVVTIRGPAEAAVDAVHALLKELVHKAISETPELKQYPALRAEVGNAAIESLERMRDTSKKATLQLVDMECSYLTVDFFRKLPQDVDKG--GNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCASLRNSIPKSIVYCQVREAKRSLLDHFFTELGKLEQKRLSNLLNEDPAVMERRSALA 577
            HLIAPE GYRRLIE S+   RGPAEA+V+A+H +LKELV KAI+ET ELK++P+L+ E+  AA  SL++ R+ S K+ L+LVDME SYLTVDFFRKL  +       +PT +I D+Y D + R+I + V +Y+ MV  +L N+IPK++V+CQVR+AK SLL++F+ ++ + + KRL  LL+E+PA+MERR   A
Sbjct:  400 HLIAPELGYRRLIEGSLNHFRGPAEASVNAIHLILKELVRKAIAETEELKRFPSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRKLHVESQNMSLSSPTSAI-DQYGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENPALMERRMQCA 592          
The following BLAST results are available for this feature:
BLAST of DR908796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SDL5A_SOYBN1.292e-9589.58Dynamin-related protein 5A OS=Glycine max PE=2 SV=... [more]
SDLCA_SOYBN7.838e-9386.98Dynamin-related protein 12A OS=Glycine max PE=1 SV... [more]
DRP1A_ARATH2.521e-9184.90Dynamin-related protein 1A OS=Arabidopsis thaliana... [more]
DRP1B_ARATH1.638e-8277.60Dynamin-related protein 1B OS=Arabidopsis thaliana... [more]
DRP1C_ARATH3.675e-5857.65Dynamin-related protein 1C OS=Arabidopsis thaliana... [more]
DRP1E_ARATH1.182e-5655.10Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
DRP1D_ARATH5.683e-5153.61Dynamin-related protein 1D OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16924 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-20_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908796 ID=DR908796; Name=DR908796; organism=Citrus sinensis; type=EST; length=579bp
TCATTTGATTGCCCCTGAACAAGGATACCGTCGTTTGATAGAATCATCTG
TGGTTACCATCAGAGGTCCTGCTGAGGCAGCTGTTGATGCGGTTCATGCT
TTACTGAAGGAACTGGTTCACAAGGCCATCAGTGAAACCCCTGAATTAAA
GCAGTATCCTGCTCTCCGAGCAGAAGTTGGAAATGCAGCTATCGAGTCTC
TTGAGAGAATGAGGGACACAAGCAAAAAAGCTACACTTCAGCTTGTTGAT
ATGGAGTGCAGTTATCTGACAGTTGATTTCTTCCGGAAGCTTCCTCAGGA
TGTTGACAAGGGTGGCAATCCTACACATTCAATTTTTGACAGATACAATG
ATTCGTATCTAAGGAGAATTGGAACCACGGTCTTGTCTTATGTCAATATG
GTCTGTGCAAGTCTGCGGAACTCAATTCCTAAGTCCATCGTTTATTGTCA
AGTTCGTGAGGCCAAACGAAGCCTACTTGATCATTTCTTCACTGAATTGG
GTAAATTGGAGCAAAAACGATTGTCAAACCTGTTGAATGAAGATCCGGCA
GTCATGGAGCGACGATCTGCCCTTGCAAA
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