DR908789

Overview
NameDR908789
Unique NameDR908789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908789 vs. ExPASy Swiss-Prot
Match: TTHL_ARATH (Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.087e-41
Identity = 88/150 (58.67%), Postives = 107/150 (71.33%), Query Frame = 1
Query:    1 RVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCPEGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 450
            R+ II GHL  + EA A      P R+R PITTHVLDVS+G+PAAGVEV LE+W G    P F       W   G+S T++DGR G LM +++ LNPG Y+I+F+T KY P  FFPYVSIVF++ ESQK EHFHVPLLL+PFSF+TYRGS
Sbjct:  182 RLRIIGGHLNVAAEAKA------PKRSRPPITTHVLDVSRGAPAAGVEVHLEVWSGTTG-PSFVHGGGGVWSSVGTSATDRDGRSGPLMDLVDALNPGTYRISFDTAKYSPGCFFPYVSIVFQVTESQKWEHFHVPLLLAPFSFSTYRGS 324          
BLAST of DR908789 vs. ExPASy Swiss-Prot
Match: HIUH_MOUSE (5-hydroxyisourate hydrolase OS=Mus musculus GN=Urah PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.904e-19
Identity = 57/126 (45.24%), Postives = 75/126 (59.52%), Query Frame = 1
Query:   88 PITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCPE----GFFPYVSIVFEI-RESQKREHFHVPLLLSPFSFTTYRGS 450
            P+TTHVLD + G PA G+ +RL             E     W+   +S TN DGRC  L+   + + PG YK+ F+T +Y  E     F+PYV +VF I +E+QK   FHVPLLLSP+S+TTYRGS
Sbjct:    7 PLTTHVLDTASGLPAQGLCLRLSRL----------EAPCQQWMELRTSYTNLDGRCPGLLTPSQ-IKPGTYKLFFDTERYWKERGQESFYPYVEVVFTITKETQK---FHVPLLLSPWSYTTYRGS 118          
BLAST of DR908789 vs. ExPASy Swiss-Prot
Match: HIUH_DANRE (5-hydroxyisourate hydrolase OS=Danio rerio GN=urah PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17
Identity = 58/154 (37.66%), Postives = 79/154 (51.30%), Query Frame = 1
Query:    1 RVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCPE----GFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 450
            R+  I GH+      SA K   +      P++THVL+++QG P A + + L     +           S W    +  TN DGRC  L+   E+   G YK+ F TGKY        F+PYV IVF I  +   +H+HVPLLLS FS++TYRGS
Sbjct:    3 RLQHIRGHI-----VSADKHINMSATLLSPLSTHVLNIAQGVPGANMTIVLHRLDPVS----------SAWNILTTGITNDDGRCPGLITK-ENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTS--QHYHVPLLLSRFSYSTYRGS 138          
BLAST of DR908789 vs. ExPASy Swiss-Prot
Match: HIUH_PSEAE (5-hydroxyisourate hydrolase OS=Pseudomonas aeruginosa GN=PA1518 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15
Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = 1
Query:   91 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKY-------CPE-GFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 450
            +TTHVLD + G P  G+++ L   +G Q   +             ++ TN DGRC Q +   ED  PG Y++ FN G Y        PE  F   V + F I  +   +H+HVPLL+SP+S++TYRGS
Sbjct:   13 LTTHVLDSAHGCPGHGIKIELYRVEGQQLELI------------ATTLTNHDGRCDQPVLQGEDFRPGVYQLVFNAGDYYRARGVQLPEPAFLDQVVLRFGIASAD--DHYHVPLLISPYSYSTYRGS 126          
BLAST of DR908789 vs. ExPASy Swiss-Prot
Match: HIUH2_CAEEL (Probable 5-hydroxyisourate hydrolase ZK697.8 OS=Caenorhabditis elegans GN=ZK697.8 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.297e-14
Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = 1
Query:   25 LCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 450
            + A+T  S  +++ +PT +   I+ HVLD+S GSPA G+++   +               +GW   GS  T  +GR   +      L PG Y++ + T  Y      E F+PYV +VF IR +   +H+HVPL LSP+ ++TYRGS
Sbjct:   10 IAAATVISNAELA-VPTAS---ISAHVLDISGGSPAGGIQILAFILLN------------NGWTNIGSQFTQDNGRVDWVSPDFT-LIPGTYRLVYITEPYYTAKNVESFYPYVEVVFNIRNAT--QHYHVPLTLSPWGYSTYRGS 136          
BLAST of DR908789 vs. ExPASy Swiss-Prot
Match: HIUH_SALTY (5-hydroxyisourate hydrolase OS=Salmonella typhimurium GN=yedX PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.306e-14
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 1
Query:   91 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 450
            ++ H+LD   G PA GVEV LE  K             +GW    +  T++DGR   L    +   PG Y++ F TG+Y      + FFP + + F I  S+  EH+HVPLLLS + ++TYRGS
Sbjct:   28 LSVHILDQQTGKPAPGVEVVLEQKKD------------NGWTQLNTGHTDQDGRIKALWPE-KAAAPGDYRVIFKTGQYFESKKLDTFFPEIPVEFHI--SKTNEHYHVPLLLSQYGYSTYRGS 136          
BLAST of DR908789 vs. ExPASy Swiss-Prot
Match: HIUH_SALTI (5-hydroxyisourate hydrolase OS=Salmonella typhi GN=yedX PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.306e-14
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 1
Query:   91 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 450
            ++ H+LD   G PA GVEV LE  K             +GW    +  T++DGR   L    +   PG Y++ F TG+Y      + FFP + + F I  S+  EH+HVPLLLS + ++TYRGS
Sbjct:   28 LSVHILDQQTGKPAPGVEVVLEQKKD------------NGWTQLNTGHTDQDGRIKALWPE-KAAAPGDYRVIFKTGQYFESKKLDTFFPEIPVEFHI--SKTNEHYHVPLLLSQYGYSTYRGS 136          
BLAST of DR908789 vs. ExPASy Swiss-Prot
Match: HIUH_SALDU (5-hydroxyisourate hydrolase OS=Salmonella dublin GN=yedX PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.306e-14
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 1
Query:   91 ITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 450
            ++ H+LD   G PA GVEV LE  K             +GW    +  T++DGR   L    +   PG Y++ F TG+Y      + FFP + + F I  S+  EH+HVPLLLS + ++TYRGS
Sbjct:   28 LSVHILDQQTGKPAPGVEVVLEQKKD------------NGWTQLNTGHTDQDGRIKALWPE-KAAAPGDYRVIFKTGQYFESKKLDTFFPEIPVEFHI--SKTNEHYHVPLLLSQYGYSTYRGS 136          
BLAST of DR908789 vs. ExPASy Swiss-Prot
Match: HIUH1_CAEEL (Probable 5-hydroxyisourate hydrolase R09H10.3 OS=Caenorhabditis elegans GN=R09H10.3 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.306e-14
Identity = 49/134 (36.57%), Postives = 71/134 (52.99%), Query Frame = 1
Query:   61 SQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCP----EGFFPYVSIVFEIRESQKREHFHVPLLLSPFSFTTYRGS 450
            S +PT +   I+ HVLD+S GSPA GV++   + +               W   GS  T  +GR   +      L PG Y++ + T  Y      E F+PYV +VF IR++   +H+HVPL LSP+ ++TYRGS
Sbjct:   20 SAVPTAS---ISAHVLDISGGSPAGGVQILAYIQQN------------DDWTKIGSEFTQDNGRVDWVSPDFT-LIPGTYRLVYITEPYYKAKNVESFYPYVEVVFNIRDAT--QHYHVPLTLSPWGYSTYRGS 135          
BLAST of DR908789 vs. ExPASy Swiss-Prot
Match: HIUH1_RHIME (5-hydroxyisourate hydrolase 1 OS=Rhizobium meliloti GN=RB0789 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.385e-12
Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 1
Query:   64 QIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKY----CPEGFFPYVSIV-FEIRESQKREHFHVPLLLSPFSFTTYRGS 450
            Q+   T   +TTHVLD + G PA+ + + L   +G +P  L             S+ TN DGRC   +     +  G Y++ F+ G+Y       G  P++ ++      + +  H+HVPLLLSP+ ++TYRGS
Sbjct:    2 QVQDGTPGRLTTHVLDTASGRPASNLRIDLYRIEGERPELL------------SSTRTNDDGRCDAPLLNGSTMETGTYELRFHAGEYLGTAAERGANPFLDVIPIRFGIADRAAHYHVPLLLSPYGYSTYRGS 123          
The following BLAST results are available for this feature:
BLAST of DR908789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
TTHL_ARATH1.087e-4158.67Uric acid degradation bifunctional protein TTL OS=... [more]
HIUH_MOUSE9.904e-1945.245-hydroxyisourate hydrolase OS=Mus musculus GN=Ura... [more]
HIUH_DANRE3.186e-1737.665-hydroxyisourate hydrolase OS=Danio rerio GN=urah... [more]
HIUH_PSEAE8.677e-1537.505-hydroxyisourate hydrolase OS=Pseudomonas aerugin... [more]
HIUH2_CAEEL3.297e-1434.93Probable 5-hydroxyisourate hydrolase ZK697.8 OS=Ca... [more]
HIUH_SALTY4.306e-1437.905-hydroxyisourate hydrolase OS=Salmonella typhimur... [more]
HIUH_SALTI4.306e-1437.905-hydroxyisourate hydrolase OS=Salmonella typhi GN... [more]
HIUH_SALDU4.306e-1437.905-hydroxyisourate hydrolase OS=Salmonella dublin G... [more]
HIUH1_CAEEL4.306e-1436.57Probable 5-hydroxyisourate hydrolase R09H10.3 OS=C... [more]
HIUH1_RHIME1.385e-1232.095-hydroxyisourate hydrolase 1 OS=Rhizobium melilot... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16917 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-43_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908789 ID=DR908789; Name=DR908789; organism=Citrus sinensis; type=EST; length=581bp
CGTGTGAGCATCATAGAAGGACACCTATGTGCTTCTACTGAAGCTTCAGC
AGGGAAAATATCTCAAATCCCTACAAGAACTCGACTACCAATTACAACAC
ATGTCTTGGATGTTTCTCAAGGGTCTCCAGCTGCGGGTGTTGAGGTACGT
TTGGAAATGTGGAAGGGCATCCAACCACGTCCCCTCTTTGGCGAAACAGA
TGTCAGTGGGTGGGTGTACCAGGGGTCTTCAACTACAAATAAAGATGGAC
GATGTGGTCAATTGATGGGCATGATTGAAGACTTGAACCCTGGATTTTAC
AAGATAACTTTCAACACTGGTAAATACTGTCCAGAAGGATTTTTTCCCTA
TGTTTCTATTGTGTTTGAGATCAGGGAGTCACAAAAGCGAGAACATTTTC
ATGTTCCTCTGCTGCTCTCACCATTCTCATTCACTACCTATCGTGGAAGC
TAGAATTGTATGGTTGGTTTGTTGACTAATAGAAACATTGTGTGCTTGTG
TTGCAAATATTCAATAGGGTTGGTCATGGCTGTGGTTATGTGGTTTAATT
TAGCCATTGTTATTTATTGAACAAAAAAAAA
back to top