CN189585
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189585 vs. ExPASy Swiss-Prot
Match: YTHD1_MOUSE (YTH domain family protein 1 OS=Mus musculus GN=Ythdf1 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.072e-51 Identity = 103/212 (48.58%), Postives = 133/212 (62.74%), Query Frame = 1 Query: 40 GAKNQKGSAPNALPVKEQNVLTNGTAEDENDKISLSPDRDEYNKADFPEEYTDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAQQKSRSCPVFLLFSVNTSGQFVGLAEMAGPVDFNKNVEYWQQDKWTGCFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEIKLEQGLKLIKIFKDHPSKTCILDDFGFYETRQK 675 GA + S NA P +V ++ E K+ + YN +F + F+IKSYSEDD+H+SIKYS+W ST +GNK+LD A++ K PV+LLFSVN SG F G+AEM PVD+ + W QDKW G F VKW VKDVPN+ L+HI LENN+NKPVTNSRDTQE+ LE+ +++KI + T I DDF YE RQ+ Sbjct: 343 GANSDSNSVGNAQPTSAPSVESHPVLE----KLKAA---HSYNPKEFDWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKG---PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQE 544
BLAST of CN189585 vs. ExPASy Swiss-Prot
Match: YTHD2_MACFA (YTH domain family protein 2 OS=Macaca fascicularis GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.074e-51 Identity = 97/173 (56.07%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 157 DEYNKADFPEEYTDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAQQKSRSCPVFLLFSVNTSGQFVGLAEMAGPVDFNKNVEYWQQDKWTGCFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEIKLEQGLKLIKIFKDHPSKTCILDDFGFYETRQK 675 + YN DF + F+IKSYSEDD+H+SIKY++W ST +GNK+LDAAY+ K PV+LLFSVN SG F G+AEM VD+N W QDKW G F V+W VKDVPNS L+HI LENNENKPVTNSRDTQE+ LE+ +++KI + T I DDF YE RQ+ Sbjct: 396 NNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG---PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQE 565
BLAST of CN189585 vs. ExPASy Swiss-Prot
Match: YTHD2_HUMAN (YTH domain family protein 2 OS=Homo sapiens GN=YTHDF2 PE=1 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 4.074e-51 Identity = 97/173 (56.07%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 157 DEYNKADFPEEYTDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAQQKSRSCPVFLLFSVNTSGQFVGLAEMAGPVDFNKNVEYWQQDKWTGCFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEIKLEQGLKLIKIFKDHPSKTCILDDFGFYETRQK 675 + YN DF + F+IKSYSEDD+H+SIKY++W ST +GNK+LDAAY+ K PV+LLFSVN SG F G+AEM VD+N W QDKW G F V+W VKDVPNS L+HI LENNENKPVTNSRDTQE+ LE+ +++KI + T I DDF YE RQ+ Sbjct: 396 NNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG---PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQE 565
BLAST of CN189585 vs. ExPASy Swiss-Prot
Match: YTHD2_BOVIN (YTH domain family protein 2 OS=Bos taurus GN=YTHDF2 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.074e-51 Identity = 97/173 (56.07%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 157 DEYNKADFPEEYTDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAQQKSRSCPVFLLFSVNTSGQFVGLAEMAGPVDFNKNVEYWQQDKWTGCFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEIKLEQGLKLIKIFKDHPSKTCILDDFGFYETRQK 675 + YN DF + F+IKSYSEDD+H+SIKY++W ST +GNK+LDAAY+ K PV+LLFSVN SG F G+AEM VD+N W QDKW G F V+W VKDVPNS L+HI LENNENKPVTNSRDTQE+ LE+ +++KI + T I DDF YE RQ+ Sbjct: 397 NNYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKG---PVYLLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQE 566
BLAST of CN189585 vs. ExPASy Swiss-Prot
Match: YTHD3_PONAB (YTH domain family protein 3 OS=Pongo abelii GN=YTHDF3 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50 Identity = 96/173 (55.49%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 157 DEYNKADFPEEYTDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAQQKSRSCPVFLLFSVNTSGQFVGLAEMAGPVDFNKNVEYWQQDKWTGCFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEIKLEQGLKLIKIFKDHPSKTCILDDFGFYETRQK 675 + YN DF + + F+IKSYSEDD+H+SIKYS+W ST +GNK+LDAAY+ K P++LLFSVN SG F G+AEM VD+N W QDKW G F VKW VKDVPN+ L+HI LENN+NKPVTNSRDTQE+ LE+ +++KI T I DDF YE RQ+ Sbjct: 402 NNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG---PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQE 571
BLAST of CN189585 vs. ExPASy Swiss-Prot
Match: YTHD3_MOUSE (YTH domain family protein 3 OS=Mus musculus GN=Ythdf3 PE=1 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50 Identity = 96/173 (55.49%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 157 DEYNKADFPEEYTDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAQQKSRSCPVFLLFSVNTSGQFVGLAEMAGPVDFNKNVEYWQQDKWTGCFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEIKLEQGLKLIKIFKDHPSKTCILDDFGFYETRQK 675 + YN DF + + F+IKSYSEDD+H+SIKYS+W ST +GNK+LDAAY+ K P++LLFSVN SG F G+AEM VD+N W QDKW G F VKW VKDVPN+ L+HI LENN+NKPVTNSRDTQE+ LE+ +++KI T I DDF YE RQ+ Sbjct: 402 NNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG---PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQE 571
BLAST of CN189585 vs. ExPASy Swiss-Prot
Match: YTHD3_HUMAN (YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.548e-50 Identity = 96/173 (55.49%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 157 DEYNKADFPEEYTDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAQQKSRSCPVFLLFSVNTSGQFVGLAEMAGPVDFNKNVEYWQQDKWTGCFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEIKLEQGLKLIKIFKDHPSKTCILDDFGFYETRQK 675 + YN DF + + F+IKSYSEDD+H+SIKYS+W ST +GNK+LDAAY+ K P++LLFSVN SG F G+AEM VD+N W QDKW G F VKW VKDVPN+ L+HI LENN+NKPVTNSRDTQE+ LE+ +++KI T I DDF YE RQ+ Sbjct: 402 NNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKG---PLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQE 571
BLAST of CN189585 vs. ExPASy Swiss-Prot
Match: YTHD1_HUMAN (YTH domain family protein 1 OS=Homo sapiens GN=YTHDF1 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.883e-50 Identity = 93/171 (54.39%), Postives = 119/171 (69.59%), Query Frame = 1 Query: 163 YNKADFPEEYTDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAQQKSRSCPVFLLFSVNTSGQFVGLAEMAGPVDFNKNVEYWQQDKWTGCFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEIKLEQGLKLIKIFKDHPSKTCILDDFGFYETRQK 675 YN +F + F+IKSYSEDD+H+SIKYS+W ST +GNK+LD+A++ K PV+LLFSVN SG F G+AEM PVD+ + W QDKW G F V+W VKDVPN+ L+HI LENN+NKPVTNSRDTQE+ LE+ +++KI + T I DDF YE RQ+ Sbjct: 377 YNPKEFEWNLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKG---PVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQE 544
BLAST of CN189585 vs. ExPASy Swiss-Prot
Match: YD374_YEAST (YTH domain-containing protein YDR374C OS=Saccharomyces cerevisiae GN=YDR374C PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.320e-25 Identity = 60/145 (41.38%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 196 DAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAQQKSRSCPVFLLFSVNTSGQFVGLAEMAGPVDFNKNVEYWQQD-KWTGCFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEIKLEQGLKLIKIFKDHPS 627 +++FFVIKS S V +S +W+ST GNK+L AY++ ++ VFL FS+NTSG+F G+AEM + + + W+ + K+ F V+W IV+D+ N LK + +NE KP+T+SRDTQEI G+ +I +FK S Sbjct: 154 NSRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAK---VFLFFSINTSGRFCGVAEMVSDLKMDLDTSIWEDEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITHSRDTQEIPYSIGISIINLFKTQDS 295
BLAST of CN189585 vs. ExPASy Swiss-Prot
Match: YTDC1_HUMAN (YTH domain-containing protein 1 OS=Homo sapiens GN=YTHDC1 PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 1.788e-14 Identity = 54/175 (30.86%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 115 AEDENDKISLSPD---RDEYNKADFPEEYTDAKFFVIKSYSEDDVHKSIKYSVWASTPNGNKKLDAAYQEAQQKSRSCPVFLLFSVNTSGQFVGLAEMAGPVDFNKNVEYW------QQDKWTGCFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEIKLEQGLKLIKIF 612 +E +++K+S S +D+ +K + + DA+FF+IKS + ++V + VW++ P KKL+ A++ A+ V L+FSV SG+F G A ++ + +W G F + W +++P + H+T NE+KPV RD QEI+LE G +L +F Sbjct: 326 SEKKHEKLSSSVRAVRKDQTSKLKYVLQ--DARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARS------VILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLF 492 The following BLAST results are available for this feature:
BLAST of CN189585 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189585 ID=CN189585; Name=CN189585; organism=Citrus sinensis; type=EST; length=735bpback to top |