CN189565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189565 vs. ExPASy Swiss-Prot
Match: PAO2_ARATH (Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 4.475e-80 Identity = 148/220 (67.27%), Postives = 169/220 (76.82%), Query Frame = 2 Query: 2 RVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAISIVFDRRPELRFFEHVSSSLPGISXXXXXXXXXXXXXXXXXEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWP 661 +VPQELVT++G FE IL+E +KVR+E D D+SI +A SIVF R+PELR EGLAH VLQWY+CRMEGWFAADAETIS K WD+EELLPGGHGLMVRGY PVINTLAKGLDIR+GHRVTKI R Y GVKVT E G+TFVADA V+AVPLGVLK+ TIKFEP+LP+WK+ AI+DLGVGIENKII+HF+KVFWP Sbjct: 130 QVPQELVTQIGVTFERILEEINKVRDEQDADISISQAFSIVFSRKPELRL-----------------------------EGLAHNVLQWYVCRMEGWFAADAETISAKCWDQEELLPGGHGLMVRGYRPVINTLAKGLDIRVGHRVTKIVRRYNGVKVTTENGQTFVADAAVIAVPLGVLKSGTIKFEPKLPEWKQEAINDLGVGIENKIILHFEKVFWP 320
BLAST of CN189565 vs. ExPASy Swiss-Prot
Match: PAO3_ARATH (Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 6.048e-77 Identity = 147/220 (66.82%), Postives = 163/220 (74.09%), Query Frame = 2 Query: 2 RVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAISIVFDRRPELRFFEHVSSSLPGISXXXXXXXXXXXXXXXXXEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWP 661 +V QELVTKVGE FE IL+E KVR+E DEDMSI +A SIVF R PELR EGLAH VLQWYLCRMEGWFAADAETIS K WD+EELLPGGHGLMVRGY PVINTL+KGLDIRL HR+TKI+R Y GVKVT E G TFVADA V+A+PLGVLK+ I FEP+LP WK+ AI+DLGVGIENKII++FD VFWP Sbjct: 131 QVSQELVTKVGENFEHILEEICKVRDEQDEDMSIAQAFSIVFKRNPELRL-----------------------------EGLAHNVLQWYLCRMEGWFAADAETISAKCWDQEELLPGGHGLMVRGYRPVINTLSKGLDIRLSHRITKISRRYSGVKVTTEKGDTFVADAAVIALPLGVLKSGMITFEPKLPQWKQEAINDLGVGIENKIILNFDNVFWP 321
BLAST of CN189565 vs. ExPASy Swiss-Prot
Match: PAO4_ARATH (Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 6.492e-63 Identity = 123/221 (55.66%), Postives = 149/221 (67.42%), Query Frame = 2 Query: 2 RVPQELVTKVGEAFESILKETDKVREEHDEDMSIQRAISIVFDRRPELRFFEHVSSSLPGISXXXXXXXXXXXXXXXXXEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIG-VKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFWP 661 ++P +LVTKVG+AF+ IL+ET+K+R+E DMS+ + ISIV DR PELR EG+A++VLQWYLCRME WFA DA ISLK WD++E L GGHGLMV+GY PVI T+AK LDIRL HRVTK+ R V V VEGG FVADAV++ VP+GVLKA I+FEP LP WK +AI LGVG ENKI + FD+ FWP Sbjct: 131 KIPPQLVTKVGDAFKRILEETEKIRDETANDMSVLQGISIVLDRNPELR-----------------------------QEGMAYEVLQWYLCRMEAWFAVDANLISLKCWDQDECLSGGHGLMVQGYEPVIRTIAKDLDIRLNHRVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLKANLIQFEPELPQWKTSAISGLGVGNENKIALRFDRAFWP 322
BLAST of CN189565 vs. ExPASy Swiss-Prot
Match: LDL2_ORYSJ (Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica GN=Os08g0143400 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.369e-20 Identity = 64/193 (33.16%), Postives = 95/193 (49.22%), Query Frame = 2 Query: 92 DMSIQRAISIVFDRRPE--LRFFEHVSSSLPGISXXXXXXXXXXXXXXXXXEGLAHKVLQWYLCRMEGWFAADAETISLKSWDKEEL--LPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFW 658 DM + R++ +VF+ E R E++ + GIS +VL W+L +E A +SL WD+++ + G H + G +++ L G+ + V +I GV +TVEGG+ F AD + PLGVLK+R+I FEP LP+ K AI LG G+ NK+ M F VFW Sbjct: 257 DMKLDRSMDLVFNTLLEHATRLREYLKKAAEGISLGEGIERLRRFYKVAKSVE-EREVLDWHLANLEFSNAGCLSELSLAHWDQDDQYEMGGDHCFLAGGNARLVHALCDGVPVLYEKTVKRIEHGEDGVSITVEGGQVFKADMALCTAPLGVLKSRSIIFEPELPERKLEAIQRLGFGLLNKVAMVFPHVFW 448
BLAST of CN189565 vs. ExPASy Swiss-Prot
Match: LDL2_ARATH (Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis thaliana GN=LDL2 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.051e-20 Identity = 58/137 (42.34%), Postives = 78/137 (56.93%), Query Frame = 2 Query: 254 KVLQWYLCRMEGWFAADAETISLKSWDKEEL--LPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFW 658 K+ W+L +E A +S WD+++ + G H + G +IN LA+GL I G V I GV+V + G + F AD ++ VPLGVLK R+IKFEP LP K+AAID LG G+ NK+ M F VFW Sbjct: 311 KLFDWHLANLEYANAGCLSNLSAAYWDQDDPYEMGGDHCFLAGGNWRLINALAEGLPIIYGKSVDTIKYGDGGVEV-ISGSQIFQADMILCTVPLGVLKKRSIKFEPELPRRKQAAIDRLGFGLLNKVAMLFPSVFW 446
BLAST of CN189565 vs. ExPASy Swiss-Prot
Match: LSDA_DROME (Possible lysine-specific histone demethylase 1 OS=Drosophila melanogaster GN=Su(var)3-3 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.361e-18 Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 2 Query: 257 VLQWYLCRMEGWFAADAETISLKSWDKEELLP--GGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKT------FVADAVVVAVPLGVLK----------ARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFW 658 +L W+ +E A +SLK WD+++ G H + GY V L + LDIR+ V +I GV+V E KT + AD VV + LGVLK + T+KF+P LPDWK+ AI LG G NK+++ FD++FW Sbjct: 521 ILDWHFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTVRNGYSCVPVALTENLDIRVNSAVKEIKYGTKGVEVVAENLKTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFDRIFW 672
BLAST of CN189565 vs. ExPASy Swiss-Prot
Match: KDM1_MOUSE (Lysine-specific histone demethylase 1 OS=Mus musculus GN=Kdm1 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.085e-17 Identity = 53/145 (36.55%), Postives = 82/145 (56.55%), Query Frame = 2 Query: 254 KVLQWYLCRMEGWFAADAETISLKSWDKEE--LLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKV----TVEGGKTFV--ADAVVVAVPLGVLKAR--TIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFW 658 ++L W+ +E A T+SLK WD+++ G H + GY V LA+GLDI+L V ++ G +V T +TF+ DAV+ +PLGVLK + ++F P LP+WK +A+ +G G NK+++ FD+VFW Sbjct: 528 QILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFW 672
BLAST of CN189565 vs. ExPASy Swiss-Prot
Match: KDM1_HUMAN (Lysine-specific histone demethylase 1 OS=Homo sapiens GN=KDM1 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.085e-17 Identity = 53/145 (36.55%), Postives = 82/145 (56.55%), Query Frame = 2 Query: 254 KVLQWYLCRMEGWFAADAETISLKSWDKEE--LLPGGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKV----TVEGGKTFV--ADAVVVAVPLGVLKAR--TIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFW 658 ++L W+ +E A T+SLK WD+++ G H + GY V LA+GLDI+L V ++ G +V T +TF+ DAV+ +PLGVLK + ++F P LP+WK +A+ +G G NK+++ FD+VFW Sbjct: 527 QILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFW 671
BLAST of CN189565 vs. ExPASy Swiss-Prot
Match: KDM1B_MOUSE (Lysine-specific histone demethylase 1B OS=Mus musculus GN=Kdm1B PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.567e-16 Identity = 54/141 (38.30%), Postives = 72/141 (51.06%), Query Frame = 2 Query: 245 LAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLP---GGHGLMVRGYLPVINTLAKGLDIRLGHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFW 658 L +VLQ++L +E + +S +SWD E G H L+ GY +I LA+GLDIRL V I V+VT G A V+V VPL +L+ I+F P L + K AI+ LG GI KI + F FW Sbjct: 537 LEGQVLQFHLSNLEYACGSSLHQVSARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLDIRLKSPVQSIDYTGDEVQVTTTDGMGHSAQKVLVTVPLAILQRGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFW 677
BLAST of CN189565 vs. ExPASy Swiss-Prot
Match: KDM1B_HUMAN (Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15 Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 245 LAHKVLQWYLCRMEGWFAADAETISLKSWDKEELLP---GGHGLMVRGYLPVINTLAKGLDIRL-GHRVTKITRHYIGVKVTVEGGKTFVADAVVVAVPLGVLKARTIKFEPRLPDWKEAAIDDLGVGIENKIIMHFDKVFW 658 L +VLQ++L +E ++ +S +SWD E G H L+ GY +I LA+GLDI+L +V I V+VT G + A V+V VPL +L+ I+F P L + K AI+ LG GI KI + F FW Sbjct: 531 LEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKSPQVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFW 672 The following BLAST results are available for this feature:
BLAST of CN189565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189565 ID=CN189565; Name=CN189565; organism=Citrus sinensis; type=EST; length=663bpback to top |