CN189552

Overview
NameCN189552
Unique NameCN189552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189552 vs. ExPASy Swiss-Prot
Match: THIJ_ECOLI (Protein thiJ OS=Escherichia coli (strain K12) GN=thiJ PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29
Identity = 75/170 (44.12%), Postives = 102/170 (60.00%), Query Frame = -1
Query:  205 SEEMEAVMIIDILRRAKANVVVASV--EDKLEILASRQIKLVADVLIDEAAKLSYDLIVLPGGLGGAQAFAKSDKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEIENRVVVDG--NLITSRGPGTSMEFALAIVEKFLGRNKALELA 702
            SEE EAV  ID+L R    V  ASV  +  L I  SR +KL+AD  + E A   YD+IVLPGG+ GA+ F  S  LV  +K+   S R   AICA+PA VL PH +      T FP + +K+  +  ++ RVV D    L+TS+GPGT+++F L I++  +GR KA E+A
Sbjct:   13 SEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVA 182          
BLAST of CN189552 vs. ExPASy Swiss-Prot
Match: THIJ_SALTY (Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28
Identity = 75/170 (44.12%), Postives = 103/170 (60.59%), Query Frame = -1
Query:  205 SEEMEAVMIIDILRRAKANVVVASV--EDKLEILASRQIKLVADVLIDEAAKLSYDLIVLPGGLGGAQAFAKSDKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEIENRVVVDG--NLITSRGPGTSMEFALAIVEKFLGRNKALELA 702
            SEE EAV  ID+L R   +V  ASV  +  L I+ SR +KL+AD  + E A   YD+IVLPGG+ GA+ F  S  LV  +K+   S R   AICA+ A VL PH +      T FPA+ +K+  +  ++ RVV D    L+TS+GPGT+++F L I++   GR KA E+A
Sbjct:   13 SEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLAGREKAHEVA 182          
BLAST of CN189552 vs. ExPASy Swiss-Prot
Match: PARK7_DANRE (Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = -1
Query:  208 SEEMEAVMIIDILRRAKANVVVASVEDKLEILASRQIKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSDKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFLGRNKALEL 702
            +EEME V+ +D++RRA   V VA +  K  +  SR++ +  D  +++A K   YD+++LPGGL GAQ  ++S  +  +LK Q+       AICA P  +L  HG+  G   T  P   +K+         E RV  DGN+ITSRGPGTS EFAL IVE+ +G   A ++
Sbjct:   14 AEEMETVIPVDVMRRAGIAVTVAGLAGKEPVQCSREVMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPTALLA-HGIAYGSTVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIVEELMGAEVAAQV 181          
BLAST of CN189552 vs. ExPASy Swiss-Prot
Match: PARK7_MESAU (Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.353e-24
Identity = 70/166 (42.17%), Postives = 97/166 (58.43%), Query Frame = -1
Query:  217 SEEMEAVMIIDILRRAKANVVVASVEDKLEILASRQIKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSDKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFLGRNKA 702
            +EEME V+ +DI+RRA   V VA +  K  +  SR + +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +LK+Q+       AICA P  +L  H +  G K T  P   +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G+  A
Sbjct:   14 AEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGPTALLA-HEIGFGSKVTTHPGAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKEAA 178          
BLAST of CN189552 vs. ExPASy Swiss-Prot
Match: PARK7_CHICK (Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24
Identity = 68/166 (40.96%), Postives = 97/166 (58.43%), Query Frame = -1
Query:  217 SEEMEAVMIIDILRRAKANVVVASVEDKLEILASRQIKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSDKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFLGRNKA 702
            +EEME V+  D++RRA   V VA +  K  +  SR + +  D  +++A K   YD+IVLPGG  GAQ  ++S  + ++LK Q+       AICA P  +L  HG+  G K    P   +K+ + +     E+RV  DGN++TSRGPGTS EF LAIVE  +G+  A
Sbjct:   14 AEEMETVIPTDVMRRAGIKVTVAGLTGKEPVQCSRDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGPTALLA-HGIGFGSKVITHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVEALMGKEVA 178          
BLAST of CN189552 vs. ExPASy Swiss-Prot
Match: PARK7_BOVIN (Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24
Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = -1
Query:  217 SEEMEAVMIIDILRRAKANVVVASVEDKLEILASRQIKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSDKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFLGRNKA 702
            +EEME V+ +D++RRA   V VA +  K  +  SR + +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +LK+Q++      AICA P  +L  H +  G K T  P   +K+   S  S  ENRV  DG ++TSRGPGTS EFAL IVE  +G+  A
Sbjct:   14 AEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKIVEVLVGKEVA 178          
BLAST of CN189552 vs. ExPASy Swiss-Prot
Match: PARK7_HUMAN (Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24
Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = -1
Query:  208 SEEMEAVMIIDILRRAKANVVVASVEDKLEILASRQIKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSDKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFLGRNKALEL 702
            +EEME V+ +D++RRA   V VA +  K  +  SR + +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +LK+Q+       AICA P  +L  H +  G K T  P   +K+ +       ENRV  DG ++TSRGPGTS EFALAIVE   G+  A ++
Sbjct:   14 AEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQV 181          
BLAST of CN189552 vs. ExPASy Swiss-Prot
Match: PARK7_CERAE (Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24
Identity = 67/169 (39.64%), Postives = 98/169 (57.99%), Query Frame = -1
Query:  208 SEEMEAVMIIDILRRAKANVVVASVEDKLEILASRQIKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSDKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFLGRNKALEL 702
            +EEME V+ +D++RRA   V +A +  K  +  SR + +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +LK+Q+       AICA P  +L  H +  G K T  P   +K+ +       ENRV  DG ++TSRGPGTS EFALAIVE   G+  A ++
Sbjct:   14 AEEMETVIPVDVMRRAGIKVTIAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQV 181          
BLAST of CN189552 vs. ExPASy Swiss-Prot
Match: PARK7_MOUSE (Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.773e-24
Identity = 68/166 (40.96%), Postives = 98/166 (59.04%), Query Frame = -1
Query:  217 SEEMEAVMIIDILRRAKANVVVASVEDKLEILASRQIKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSDKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFLGRNKA 702
            +EEME V+ +D++RRA   V VA +  K  +  SR + +  D  +++A     YD++VLPGG  GAQ  ++S  +  +LK+Q+       AICA P  +L  H +  G K T  P   +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE  +G++ A
Sbjct:   14 AEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGPTALLA-HEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALVGKDMA 178          
BLAST of CN189552 vs. ExPASy Swiss-Prot
Match: PARK7_RAT (Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.146e-23
Identity = 70/166 (42.17%), Postives = 98/166 (59.04%), Query Frame = -1
Query:  217 SEEMEAVMIIDILRRAKANVVVASVEDKLEILASRQIKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSDKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFLGRNKA 702
            +EEME V+ +DI+RRA   V VA +  K  +  SR + +  D  ++EA     YD++VLPGG  GAQ  ++S  +  +LK+Q+       AICA P  +L  H +  G K T+ P   +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G++ A
Sbjct:   14 AEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVVICPDTSLEEAKTQGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGPTALLA-HEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKDMA 178          
The following BLAST results are available for this feature:
BLAST of CN189552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
THIJ_ECOLI9.057e-2944.12Protein thiJ OS=Escherichia coli (strain K12) GN=t... [more]
THIJ_SALTY1.545e-2844.12Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=... [more]
PARK7_DANRE6.075e-2540.24Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1[more]
PARK7_MESAU1.353e-2442.17Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1... [more]
PARK7_CHICK1.768e-2440.96Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1[more]
PARK7_BOVIN2.309e-2441.57Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1[more]
PARK7_HUMAN3.938e-2440.24Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2[more]
PARK7_CERAE5.143e-2439.64Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE... [more]
PARK7_MOUSE8.773e-2440.96Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1[more]
PARK7_RAT1.146e-2342.17Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002A18_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189552 ID=CN189552; Name=CN189552; organism=Citrus sinensis; type=EST; length=702bp
TTTTTTTTTTTTTTGACTCCATGAACTCATTTATTTATAAACCACACTGC
TGTACAAACCCACACAGTGAATCCATATTCAAACATGAATTCAAGTTTCC
ATTTCCCCTCTCTACAAGCAGTAGCAATACAGAAATAAACACACTAGTTT
AATAGTAGACAGGTCCCCATACAAACGTTAGGCGCGAGTGAAAAGCATTA
TCTTTGCAAGCTCAAGTGCCTTGTTGCGGCCCAAAAACTTCTCCACAATT
GCCAGTGCAAACTCCATAGAAGTTCCTGGCCCTCTACTGGTGATGAGGTT
GCCATCAACCACAACCCTGTTTTCGATTTCACTCTGATCTGACAGCTTGT
TGCACATAGCAGGAAAAGCTGTAGCTTTTTTACCCTTGAGTAAGCCATGG
GGCTCCAACACTAAAGCTGGGGATGCACATATAGCACCATAAGGTCTATT
TGATTCCTTTTGCTTCTTTAGCATATTCACCAATTTATCTGACTTCGCAA
ATGCTTGAGCGCCACCAAGTCCACCTGGCAAGACAATTAAATCATACGAC
AGTTTAGCTGCCTCATCAATGAGCACATCTGCCACTAATTTAATTTGACG
AGAAGCCAGAATTTCTAGTTTATCCTCAACTGATGCAACTACAACATTTG
CTTTAGCTCGTCGCAGAATATCAATTATCATAACAGCTTCCATCTCCTCC
GA
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