CN189549

Overview
NameCN189549
Unique NameCN189549
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12029 contig Csv1_Contig12029:99..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189549 vs. ExPASy Swiss-Prot
Match: F10AL_ARATH (FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.354e-60
Identity = 131/229 (57.21%), Postives = 147/229 (64.19%), Query Frame = 1
Query:   28 MDAEKVKELKQFIDQCKSNPSILADPSLSFFRDYLESLHAKVPTDAYKEGK-SEPRA----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSTEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAV 696
            MD+ K+ ELK FIDQCKS+PS+L  PSLSFFRDYLESL AK+PT  ++E K ++PR+                                     GD VE DNDPPQKMGDSS EVTD                +SEG  DEAIE  T AI LNP SAIMY  RASVYIK+KKPNAAIRDA AALEINPDSAKGYK+RGMA AMLG W EA  DLH+AS ID+DEEI+AV
Sbjct:    1 MDSTKLSELKVFIDQCKSDPSLLTTPSLSFFRDYLESLGAKIPTGVHEEDKDTKPRSFVVEESDDDMDETEEVKPKVEEEEEEDEIVESDVELEGDTVEPDNDPPQKMGDSSVEVTDENREAAQEAKGKAMEALSEGNFDEAIEHLTRAITLNPTSAIMYGNRASVYIKLKKPNAAIRDANAALEINPDSAKGYKSRGMARAMLGEWAEAAKDLHLASTIDYDEEISAV 229          
BLAST of CN189549 vs. ExPASy Swiss-Prot
Match: F10A1_PONAB (Hsc70-interacting protein OS=Pongo abelii GN=ST13 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.670e-41
Identity = 91/224 (40.62%), Postives = 129/224 (57.59%), Query Frame = 1
Query:   28 MDAEKVKELKQFIDQCKSNPSILADPSLSFFRDYLESLHAKVPTDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSTEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAV 696
            MD  KV EL+ F+  CK +PS+L    + F R+++ES+  KVP  A ++ KSE                                      ++E D D PQ+MGD + E+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL +A K+D+DE+ +A+
Sbjct:    1 MDPRKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPP-ATQKAKSEENTKEEKPDSKKVEEDLKADEPSSEESDLEIDKEG---VIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAM 220          
BLAST of CN189549 vs. ExPASy Swiss-Prot
Match: F10A1_HUMAN (Hsc70-interacting protein OS=Homo sapiens GN=ST13 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.670e-41
Identity = 91/224 (40.62%), Postives = 129/224 (57.59%), Query Frame = 1
Query:   28 MDAEKVKELKQFIDQCKSNPSILADPSLSFFRDYLESLHAKVPTDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSTEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAV 696
            MD  KV EL+ F+  CK +PS+L    + F R+++ES+  KVP  A ++ KSE                                      ++E D D PQ+MGD + E+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL +A K+D+DE+ +A+
Sbjct:    1 MDPRKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPP-ATQKAKSEENTKEEKPDSKKVEEDLKADEPSSEESDLEIDKEG---VIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAM 220          
BLAST of CN189549 vs. ExPASy Swiss-Prot
Match: F10A1_MOUSE (Hsc70-interacting protein OS=Mus musculus GN=St13 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.554e-41
Identity = 90/224 (40.18%), Postives = 128/224 (57.14%), Query Frame = 1
Query:   28 MDAEKVKELKQFIDQCKSNPSILADPSLSFFRDYLESLHAKVPTDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSTEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAV 696
            MD  KV EL+ F+  C+ +PS+L    + F R+++ES+  KVP   +K  KSE                                      ++E D D PQ+MGD + E+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL +A K+D+DE+ +A+
Sbjct:    1 MDPRKVSELRAFVKMCRQDPSVLHTEEMRFLREWVESMGGKVPPATHK-AKSEENTKEEKRDKTTEENIKTEELSSEESDLEIDNEG----VIEPDTDAPQEMGDENAEITEEMMDEANEKKGAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAM 219          
BLAST of CN189549 vs. ExPASy Swiss-Prot
Match: F10A1_CHICK (Hsc70-interacting protein OS=Gallus gallus GN=ST13 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.947e-41
Identity = 92/231 (39.83%), Postives = 129/231 (55.84%), Query Frame = 1
Query:   28 MDAEKVKELKQFIDQCKSNPSILADPSLSFFRDYLESLHAKVP-------TDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSTEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAV 696
            MD+ K+ EL+ F+  CK NP +L    L F R+++ES+   +P       TD   +GK+E +                                    ++E DND PQ+MGD + EVT+                +SEG L +A+ L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A++INPDSA+ YK RG AH +LGHWEEA HDL +A K+D+DE+ +A+
Sbjct:    1 MDSRKLGELRAFVRLCKQNPGLLHTEELGFLREWVESMGGTIPPAPASTSTDETSKGKAEEQPEEPVKSPEPESEESDLEIDNEG-------------VIEPDNDDPQEMGDENVEVTEEMMDQANEKKMEAINALSEGDLQKAVNLFTDAIKLNPCLAILYAKRASVFVKLQKPNAAIRDCDRAIKINPDSAQTYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAM 218          
BLAST of CN189549 vs. ExPASy Swiss-Prot
Match: F10A1_RAT (Hsc70-interacting protein OS=Rattus norvegicus GN=St13 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.014e-40
Identity = 90/224 (40.18%), Postives = 128/224 (57.14%), Query Frame = 1
Query:   28 MDAEKVKELKQFIDQCKSNPSILADPSLSFFRDYLESLHAKVPTDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSTEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAV 696
            MD  KV EL+ F+  C+ +PS+L    + F R+++ES+  KVP   +K  KSE                                      ++EAD D PQ+MGD + E+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA  DL +A K+D+DE+ +A+
Sbjct:    1 MDPRKVSELRAFVKMCRQDPSVLHTEEMRFLREWVESMGGKVPPATHK-AKSEENTKEEKRDKTTEDNIKTEEPSSEESDLEIDNEG----VIEADTDAPQEMGDENAEITEAMMDEANEKKGAAIDALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAARDLALACKLDYDEDASAM 219          
BLAST of CN189549 vs. ExPASy Swiss-Prot
Match: F10A5_HUMAN (Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.855e-40
Identity = 90/224 (40.18%), Postives = 128/224 (57.14%), Query Frame = 1
Query:   28 MDAEKVKELKQFIDQCKSNPSILADPSLSFFRDYLESLHAKVPTDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSTEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAV 696
            MD  KV EL+ F+  CK +PS+L    + F R+++ES+  KVP  A ++ KSE                                      ++E D D PQ+MGD + E+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAI+D   A+EINPDSA+ YK RG AH +LGHWEEA HDL  A K+D+DE+ +A+
Sbjct:    1 MDPCKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPP-ATQKAKSEENTKEEKPDSKKVEEDLKADEPSTEESDLEIDKEG---VIEPDTDAPQEMGDENVEITEEMMDQANDKKVAAIEVLNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIQDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLAFACKLDYDEDASAM 220          
BLAST of CN189549 vs. ExPASy Swiss-Prot
Match: F10A4_HUMAN (Protein FAM10A4 OS=Homo sapiens GN=FAM10A4 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.262e-39
Identity = 89/224 (39.73%), Postives = 125/224 (55.80%), Query Frame = 1
Query:   28 MDAEKVKELKQFIDQCKSNPSILADPSLSFFRDYLESLHAKVPTDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSTEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAV 696
            MD  KV EL+ F+  CK +PSIL    + F R+++ES+       A ++ KSE                                      ++E D D PQ+MGD + E+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL +A K D+DE+ +A+
Sbjct:    1 MDPRKVNELRAFVKMCKKDPSILHTQEMRFLREWVESMGGT----ATQKAKSEENTKEEKPDSKVEEDLKADEPSSEESDLEIDKEG----VIEPDTDAPQEMGDENAEITEEVMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKRRGKAHRLLGHWEEAAHDLALACKFDYDEDASAM 216          
BLAST of CN189549 vs. ExPASy Swiss-Prot
Match: HRP_PLABE (58 kDa phosphoprotein OS=Plasmodium berghei PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25
Identity = 75/242 (30.99%), Postives = 109/242 (45.04%), Query Frame = 1
Query:   28 MDAEKVKELKQFIDQCKSNPSILADPSLSFFRDYLESLHAKVPTD--AYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSTEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIML--------------------NPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEI 687
            MD EK+++LK+F+  C+ NPSIL  P LSFF+D++ES   K+  D   Y++ KSE                                        E ++D P+K+     E+                  +SE +++E  +L  EA+ L                    NPSA++Y  RAS+ + +K+P A IRD T AL +N DSA  YK R  A+  LG WE A  D+    KID+DE +
Sbjct:    1 MDIEKIEDLKKFVASCEENPSILLKPELSFFKDFIESFGGKIKKDKMGYEKMKSEDSTEEKSDEEEEDEEEEEE---------------------EEEDDDPEKL-----ELIKEEAVECPPLAPIIEGELSEEQIEEICKLKEEAVDLVENKKYEEALEKYNKIISFGNPSAMIYTKRASILLNLKRPKACIRDCTEALNLNVDSANAYKIRAKAYRYLGKWEFAHADMEQGQKIDYDENL 216          
The following BLAST results are available for this feature:
BLAST of CN189549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
F10AL_ARATH3.354e-6057.21FAM10 family protein At4g22670 OS=Arabidopsis thal... [more]
F10A1_PONAB2.670e-4140.63Hsc70-interacting protein OS=Pongo abelii GN=ST13 ... [more]
F10A1_HUMAN2.670e-4140.63Hsc70-interacting protein OS=Homo sapiens GN=ST13 ... [more]
F10A1_MOUSE4.554e-4140.18Hsc70-interacting protein OS=Mus musculus GN=St13 ... [more]
F10A1_CHICK5.947e-4139.83Hsc70-interacting protein OS=Gallus gallus GN=ST13... [more]
F10A1_RAT1.014e-4040.18Hsc70-interacting protein OS=Rattus norvegicus GN=... [more]
F10A5_HUMAN3.855e-4040.18Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV... [more]
F10A4_HUMAN4.262e-3939.73Protein FAM10A4 OS=Homo sapiens GN=FAM10A4 PE=1 SV... [more]
HRP_PLABE4.575e-2530.9958 kDa phosphoprotein OS=Plasmodium berghei PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0002A16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002A16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189549 ID=CN189549; Name=CN189549; organism=Citrus sinensis; type=EST; length=697bp
GGAACCCTTGAACGAAGGGAGACGGCAATGGACGCAGAAAAAGTGAAAGA
ACTGAAACAGTTCATCGATCAGTGCAAATCGAATCCTTCCATTCTCGCCG
ACCCCTCCCTCTCCTTCTTCCGCGACTATCTCGAAAGTCTCCATGCCAAA
GTGCCTACCGATGCGTACAAAGAAGGCAAATCCGAACCGAGGGCCTCTGT
GGTGGAGGAGAGCGAAGAGGAAGAACAAAGAGTAGAAGTAGAAGAAAAAG
AGGAAGAAGAGGATGAAATAGTCGAGTCCGATATTGAGCTTGAAGGAGAT
ATTGTGGAGGCTGATAATGATCCTCCTCAGAAGATGGGAGACAGTTCGAC
AGAAGTTACTGATGAGAAACGCGAAGCGGCTGCGGAGGCAAAGGCCAAGG
CCATGGAAGCCATCTCTGAAGGAAAGTTGGACGAGGCAATTGAGCTTTCG
ACTGAGGCTATTATGCTGAATCCATCAGCCATTATGTATGCAACTAGAGC
CAGTGTATACATCAAAATGAAGAAGCCTAATGCTGCCATCCGGGATGCCA
CTGCAGCTTTAGAGATTAACCCAGATTCTGCTAAGGGCTACAAGACCCGT
GGCATGGCACATGCAATGCTAGGTCACTGGGAGGAGGCTGTGCATGATCT
TCATGTTGCTTCGAAGATAGATTTTGATGAAGAAATAGCTGCTGTAC
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