CN189538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189538 vs. ExPASy Swiss-Prot
Match: DER22_ARATH (Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.553e-72 Identity = 132/153 (86.27%), Postives = 141/153 (92.16%), Query Frame = -2 Query: 315 RTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKALFADEAVVVARPANVRFAPPPAEEVHQD 773 +TADFLYMLLFGA+ LTG VLIGGMIPYLS SFAKIIFLSNSLT MMVYVWSKQNP+IHMSFLGLFTFTAAYLPWVLLGFS+ VGASAWVDLLGMIAGHAYYFL +VYPRMT RRPLKTPSF+KALFADE VVVARP +VRFA P +E+HQD Sbjct: 92 KTADFLYMLLFGASVLTGIVLIGGMIPYLSASFAKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWVDLLGMIAGHAYYFLAEVYPRMTNRRPLKTPSFLKALFADEPVVVARPEDVRFAAAPFDEIHQD 244
BLAST of CN189538 vs. ExPASy Swiss-Prot
Match: DER21_ARATH (Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 SV=2) HSP 1 Score: 263.848 bits (673), Expect = 7.215e-70 Identity = 128/153 (83.66%), Postives = 137/153 (89.54%), Query Frame = -2 Query: 315 RTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKALFADEAVVVARPANVRFAPPPAEEVHQD 773 +T DFLYMLLFGAT LTG VLIGGMIPYLS SF+KIIFLSNSLT MMVYVWSKQNP+IHMSFLGLFTFTAAYLPWVLLGFS+ VGASAW D LGMIAGHAYYFL VYPRMT RRPLKTPSF+KALFADE VV+ARP +VRFA P +E+HQD Sbjct: 92 KTTDFLYMLLFGATVLTGIVLIGGMIPYLSVSFSKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWGDFLGMIAGHAYYFLAFVYPRMTDRRPLKTPSFLKALFADEPVVIARPEDVRFAHAPFDEIHQD 244
BLAST of CN189538 vs. ExPASy Swiss-Prot
Match: DERL2_ORYSJ (Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 3.352e-67 Identity = 122/139 (87.77%), Postives = 129/139 (92.81%), Query Frame = -2 Query: 357 RTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKALFADEAVVVARPAN 773 RTADF YMLLFGAT LTG VLIGGMIPY+SE+FA+I+FLSNSLT MMVYVWSK NPFIHMSFLGLFTFTAAYLPWVLLGFS+ VG+S WVDLLGMIAGH YYFLEDVYPRMTGRRPLKTPSFIKALFAD+ VVVARP N Sbjct: 92 RTADFFYMLLFGATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFADDNVVVARPPN 230
BLAST of CN189538 vs. ExPASy Swiss-Prot
Match: DER22_MAIZE (Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 9.752e-67 Identity = 121/139 (87.05%), Postives = 129/139 (92.81%), Query Frame = -2 Query: 357 RTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKALFADEAVVVARPAN 773 RTADF YMLLFGAT LTG VLIGGMIPY+SE+FA+I+FLSNSLT MMVYVWSK NPFIHMSFLGLFTFTAAYLPWVLLGFS+ VG+S WVDLLGMIAGH YYFLEDVYPRMTGRRPLKTPSFIKALFAD+ VVVA+P N Sbjct: 92 RTADFFYMLLFGATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFADDNVVVAQPPN 230
BLAST of CN189538 vs. ExPASy Swiss-Prot
Match: DER21_MAIZE (Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2) HSP 1 Score: 251.136 bits (640), Expect = 4.840e-66 Identity = 120/139 (86.33%), Postives = 128/139 (92.09%), Query Frame = -2 Query: 357 RTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKALFADEAVVVARPAN 773 RTADF YMLLFGAT LT VLIGGMIPY+SE+FA+I+FLSNSLT MMVYVWSK NPFIHMSFLGLFTFTAAYLPWVLLGFS+ VG+S WVDLLGMIAGH YYFLEDVYPRMTGRRPLKTPSFIKALFAD+ VVVA+P N Sbjct: 92 RTADFFYMLLFGATVLTSIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFADDNVVVAQPPN 230
BLAST of CN189538 vs. ExPASy Swiss-Prot
Match: DERL2_PONAB (Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.245e-29 Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = -2 Query: 393 RTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGR-RPLKTPSFIKALF 773 RTADF++M LFG +T L F ++FL + T+M+VYVWS++NP++ M+F GL F A +LPWVL+GFS+ +G S VDLLG+ GH Y+FLEDV+P G R LKTPS +KA+F Sbjct: 93 RTADFVFMFLFGGFLMT-----------LFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGIRILKTPSILKAIF 209
BLAST of CN189538 vs. ExPASy Swiss-Prot
Match: DERL2_HUMAN (Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.245e-29 Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = -2 Query: 393 RTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGR-RPLKTPSFIKALF 773 RTADF++M LFG +T L F ++FL + T+M+VYVWS++NP++ M+F GL F A +LPWVL+GFS+ +G S VDLLG+ GH Y+FLEDV+P G R LKTPS +KA+F Sbjct: 93 RTADFVFMFLFGGFLMT-----------LFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGIRILKTPSILKAIF 209
BLAST of CN189538 vs. ExPASy Swiss-Prot
Match: DERL2_DICDI (Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.124e-29 Identity = 62/126 (49.21%), Postives = 86/126 (68.25%), Query Frame = -2 Query: 396 RTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKAL 773 R+AD+L+M +FG+ L LI + ++ K++FL+ S+ M++YVWS++NP +H+SFLGLFTF+A YLPWV+L DLLG +AGHAYYFLED YP ++ RR LKTP F+K L Sbjct: 92 RSADYLFMWIFGSFLL----LIMDAFLFYTKIVTKVLFLAPSIAFMVIYVWSRRNPNMHISFLGLFTFSAPYLPWVILIMGYLFNHDLTTDLLGAVAGHAYYFLEDAYPLISNRRLLKTPGFLKNL 213
BLAST of CN189538 vs. ExPASy Swiss-Prot
Match: DERL2_MOUSE (Derlin-2 OS=Mus musculus GN=Derl2 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.054e-28 Identity = 60/128 (46.88%), Postives = 84/128 (65.62%), Query Frame = -2 Query: 393 RTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGR-RPLKTPSFIKALF 773 RTADF++M LFG +T L F ++FL + T+M+VYVWS++NP++ M+F GL F A +LPWVL+GFS+ +G S VDLLG+ GH Y+FLED++P G R LKTPS ++ +F Sbjct: 93 RTADFVFMFLFGGFLMT-----------LFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDIFPNQPGGIRILKTPSILRTIF 209
BLAST of CN189538 vs. ExPASy Swiss-Prot
Match: DERL2_CAEEL (Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.798e-28 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = -2 Query: 393 RTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYP-RMTGRRPLKTPSFIKALF 773 R ADF+YM LFGA + LS F +I+FL + T+M+VY+WS++NP I M+F G+ TFTA YLPWVLL FS+ +G +A VD +G+ GH Y+FLEDV+P + G+R LKTP ++ LF Sbjct: 91 RRADFVYMFLFGAVLMI-----------LSGIFVQILFLGQAFTIMLVYIWSRRNPMIQMNFFGVLTFTAPYLPWVLLLFSLLLGNNAVVDFMGIACGHIYFFLEDVFPFQEHGKRFLKTPQWLVYLF 207 The following BLAST results are available for this feature:
BLAST of CN189538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189538 ID=CN189538; Name=CN189538; organism=Citrus sinensis; type=EST; length=774bpback to top |