CN189533

Overview
NameCN189533
Unique NameCN189533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189533 vs. ExPASy Swiss-Prot
Match: SRPK1_PONAB (Serine/threonine-protein kinase SRPK1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.460e-24
Identity = 45/89 (50.56%), Postives = 72/89 (80.90%), Query Frame = 1
Query:    4 ALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 270
            AL++ELLG +PRK+ + G+YS++FF + GDL+HI +L+ W + +VLVEKY++++ +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  567 ALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655          
BLAST of CN189533 vs. ExPASy Swiss-Prot
Match: SRPK1_HUMAN (Serine/threonine-protein kinase SRPK1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.460e-24
Identity = 45/89 (50.56%), Postives = 72/89 (80.90%), Query Frame = 1
Query:    4 ALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 270
            AL++ELLG +PRK+ + G+YS++FF + GDL+HI +L+ W + +VLVEKY++++ +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  567 ALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655          
BLAST of CN189533 vs. ExPASy Swiss-Prot
Match: SRPK2_MOUSE (Serine/threonine-protein kinase SRPK2 OS=Mus musculus GN=Srpk2 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23
Identity = 48/89 (53.93%), Postives = 66/89 (74.16%), Query Frame = 1
Query:    4 ALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 270
            A ++ELLG +PR  AL G+YSR+FFNR G+LRHI +L+ W +  VLVEKY +   DA    DFL+P+L+ VPEKR +A +CL HPW+++
Sbjct:  593 AHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLNS 681          
BLAST of CN189533 vs. ExPASy Swiss-Prot
Match: SRPK1_MOUSE (Serine/threonine-protein kinase SRPK1 OS=Mus musculus GN=Srpk1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.075e-23
Identity = 45/89 (50.56%), Postives = 71/89 (79.78%), Query Frame = 1
Query:    4 ALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 270
            AL++ELLG +PRK+ + G+YS++FF + GDL+HI +L+ W + +VLVEKY++ + +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  560 ALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLLEVLVEKYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLNS 648          
BLAST of CN189533 vs. ExPASy Swiss-Prot
Match: SRPK3_HUMAN (Serine/threonine-protein kinase SRPK3 OS=Homo sapiens GN=SRPK3 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21
Identity = 44/88 (50.00%), Postives = 65/88 (73.86%), Query Frame = 1
Query:    4 ALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMS 267
            A ++ELLG +P   AL GRYSR+FFNR G+LRHI  L+ W + +VL+EKY++    A   + FL+P+++++PEKR +AA CL HPW++
Sbjct:  445 AHIVELLGDIPPAFALSGRYSREFFNRRGELRHIHNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 532          
BLAST of CN189533 vs. ExPASy Swiss-Prot
Match: SRPK3_MOUSE (Serine/threonine-protein kinase SRPK3 OS=Mus musculus GN=Srpk3 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.313e-21
Identity = 44/88 (50.00%), Postives = 65/88 (73.86%), Query Frame = 1
Query:    4 ALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMS 267
            A ++ELLG +P   AL GRYSR+FFNR G+LRHI  L+ W + +VL+EKY++    A   + FL+P+++++PEKR +AA CL HPW++
Sbjct:  477 AHIVELLGDIPPAFALSGRYSREFFNRRGELRHIPNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 564          
BLAST of CN189533 vs. ExPASy Swiss-Prot
Match: SRPK2_HUMAN (Serine/threonine-protein kinase SRPK2 OS=Homo sapiens GN=SRPK2 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.313e-21
Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 1
Query:    4 ALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 270
            A ++ELLG +PR  AL G+YSR+FFNR G+LRHI +L+ W +  VLVEKY +   DA    DFL+P+L+ VPEKR +A     HPW+++
Sbjct:  600 AHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGCLCRHPWLNS 688          
BLAST of CN189533 vs. ExPASy Swiss-Prot
Match: SKY1_YEAST (Serine/threonine-protein kinase SKY1 OS=Saccharomyces cerevisiae GN=SKY1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18
Identity = 40/87 (45.98%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    4 ALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWM 264
            A ++ELLG +P  +   G+Y+R FFN  G LR+I +L+FWP+  VL EKY F++ +AK+++DFL P+L   P KR  A   ++HPW+
Sbjct:  620 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 706          
BLAST of CN189533 vs. ExPASy Swiss-Prot
Match: SKY1_DICDI (Probable serine/threonine-protein kinase sky1 OS=Dictyostelium discoideum GN=sky1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18
Identity = 47/92 (51.09%), Postives = 60/92 (65.22%), Query Frame = 1
Query:    4 ALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRF-WPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSAGP 276
            ALM+ELLG  PR I  GG  SR +F   GDLR I  L   WP+  VL EKY F+ ++AKD   FL+P+L+++PEKR TA  CL+H W+   P
Sbjct:  561 ALMIELLGKPPRFIFAGGDESRVYFTHKGDLRKIPDLSDQWPLFSVLTEKYKFSIQEAKDFEAFLLPMLNYLPEKRATAKDCLNHTWLKDVP 652          
BLAST of CN189533 vs. ExPASy Swiss-Prot
Match: DSK1_SCHPO (Protein kinase dsk1 OS=Schizosaccharomyces pombe GN=dsk1 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 1
Query:    4 ALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMS--AGPRLR-EPSMAAGE 309
            A ++ELL   P+++AL G++SRD FNR G+LR+I +L+FWP+  VL +KY F+   A+ ++DFL P+L F P KR  A    + PW+   A P  + E + A GE
Sbjct:  430 AQIIELLVNYPKQMALSGKHSRDLFNRRGELRNIHKLKFWPLKDVLEQKYHFSAELAQQISDFLSPMLCFDPAKRTNAGYMSNSPWLREVADPTFKIETTGATGE 534          
The following BLAST results are available for this feature:
BLAST of CN189533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SRPK1_PONAB5.460e-2450.56Serine/threonine-protein kinase SRPK1 OS=Pongo abe... [more]
SRPK1_HUMAN5.460e-2450.56Serine/threonine-protein kinase SRPK1 OS=Homo sapi... [more]
SRPK2_MOUSE1.589e-2353.93Serine/threonine-protein kinase SRPK2 OS=Mus muscu... [more]
SRPK1_MOUSE2.075e-2350.56Serine/threonine-protein kinase SRPK1 OS=Mus muscu... [more]
SRPK3_HUMAN1.942e-2150.00Serine/threonine-protein kinase SRPK3 OS=Homo sapi... [more]
SRPK3_MOUSE3.313e-2150.00Serine/threonine-protein kinase SRPK3 OS=Mus muscu... [more]
SRPK2_HUMAN3.313e-2151.69Serine/threonine-protein kinase SRPK2 OS=Homo sapi... [more]
SKY1_YEAST5.847e-1845.98Serine/threonine-protein kinase SKY1 OS=Saccharomy... [more]
SKY1_DICDI9.974e-1851.09Probable serine/threonine-protein kinase sky1 OS=D... [more]
DSK1_SCHPO3.790e-1743.81Protein kinase dsk1 OS=Schizosaccharomyces pombe G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002A05_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189533 ID=CN189533; Name=CN189533; organism=Citrus sinensis; type=EST; length=731bp
GACGCTCTGATGATGGAGCTTCTCGGGATGATGCCACGCAAGATTGCATT
GGGTGGTCGCTATTCCCGTGATTTCTTCAACAGACATGGGGACTTGAGGC
ACATCCGTCGTCTACGTTTTTGGCCTATGAATAAGGTCCTTGTAGAGAAG
TACGACTTTAATGAGCGAGATGCAAAGGACATGGCTGACTTCCTTGTTCC
AATACTTGATTTCGTTCCTGAAAAGAGACCAACAGCGGCCCAATGTCTCA
GTCATCCATGGATGAGTGCAGGACCTCGACTGCGTGAGCCTTCTATGGCT
GCTGGTGAGCCACGGGAGACAGAAGGCAGTATACCTGAAAGAAAGAGGAG
GGAGCAGGAGGAGAGGGAGGCTATGGAAGTGGGAGTGGGGAATATGGCCA
TTAATGGGGCTTCAAAGTTATCAAGCGACCAGGAAGCTGCTGCATTAAAG
CTTCCCAAGTAGACATTCAGGTTGTGTTTCTCACAAGTTCCTCCAGTTGT
CTTTATATTCTTCTCTCACATGATCTTTTGCCAAAATGTTGCTTGCAATA
TTTGTGCAAAATGCGAAGACTAATGTAATGCCATGGGATTGTGGTATTTT
GAAATTGGCGAGTGGCAAAAGTTGAAGTTTGTTTCAAGTAACATGTACAT
GTCTCAAGCATAGTCTCAAACTATGTTGAACAGATTATTTTATTGTATTG
TGTACAATCTAAAGAGTTTCTATTGGGGGTT
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