CN189532

Overview
NameCN189532
Unique NameCN189532
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189532 vs. ExPASy Swiss-Prot
Match: SRPK2_MOUSE (Serine/threonine-protein kinase SRPK2 OS=Mus musculus GN=Srpk2 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.552e-16
Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = -1
Query:  527 RDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 730
            R+FFNR G+LRHI +L+ W +  VLVEKY +   DA    DFL+P+L+ VPEKR +A +CL HPW+++
Sbjct:  614 REFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLNS 681          
BLAST of CN189532 vs. ExPASy Swiss-Prot
Match: SRPK1_PONAB (Serine/threonine-protein kinase SRPK1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.457e-16
Identity = 33/68 (48.53%), Postives = 54/68 (79.41%), Query Frame = -1
Query:  527 RDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 730
            ++FF + GDL+HI +L+ W + +VLVEKY++++ +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  588 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655          
BLAST of CN189532 vs. ExPASy Swiss-Prot
Match: SRPK1_HUMAN (Serine/threonine-protein kinase SRPK1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.457e-16
Identity = 33/68 (48.53%), Postives = 54/68 (79.41%), Query Frame = -1
Query:  527 RDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 730
            ++FF + GDL+HI +L+ W + +VLVEKY++++ +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  588 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655          
BLAST of CN189532 vs. ExPASy Swiss-Prot
Match: SRPK1_MOUSE (Serine/threonine-protein kinase SRPK1 OS=Mus musculus GN=Srpk1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 33/68 (48.53%), Postives = 53/68 (77.94%), Query Frame = -1
Query:  527 RDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 730
            ++FF + GDL+HI +L+ W + +VLVEKY++ + +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  581 KEFFTKKGDLKHITKLKPWGLLEVLVEKYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLNS 648          
BLAST of CN189532 vs. ExPASy Swiss-Prot
Match: SRPK3_HUMAN (Serine/threonine-protein kinase SRPK3 OS=Homo sapiens GN=SRPK3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.822e-15
Identity = 32/67 (47.76%), Postives = 50/67 (74.63%), Query Frame = -1
Query:  530 RDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMS 730
            R+FFNR G+LRHI  L+ W + +VL+EKY++    A   + FL+P+++++PEKR +AA CL HPW++
Sbjct:  466 REFFNRRGELRHIHNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 532          
BLAST of CN189532 vs. ExPASy Swiss-Prot
Match: SRPK3_MOUSE (Serine/threonine-protein kinase SRPK3 OS=Mus musculus GN=Srpk3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.520e-15
Identity = 32/67 (47.76%), Postives = 50/67 (74.63%), Query Frame = -1
Query:  530 RDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMS 730
            R+FFNR G+LRHI  L+ W + +VL+EKY++    A   + FL+P+++++PEKR +AA CL HPW++
Sbjct:  498 REFFNRRGELRHIPNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 564          
BLAST of CN189532 vs. ExPASy Swiss-Prot
Match: SRPK2_HUMAN (Serine/threonine-protein kinase SRPK2 OS=Homo sapiens GN=SRPK2 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.236e-14
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = -1
Query:  527 RDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSA 730
            R+FFNR G+LRHI +L+ W +  VLVEKY +   DA    DFL+P+L+ VPEKR +A     HPW+++
Sbjct:  621 REFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGCLCRHPWLNS 688          
BLAST of CN189532 vs. ExPASy Swiss-Prot
Match: SKY1_YEAST (Serine/threonine-protein kinase SKY1 OS=Saccharomyces cerevisiae GN=SKY1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.673e-13
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = -1
Query:  533 RDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWM 730
            R FFN  G LR+I +L+FWP+  VL EKY F++ +AK+++DFL P+L   P KR  A   ++HPW+
Sbjct:  641 RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 706          
BLAST of CN189532 vs. ExPASy Swiss-Prot
Match: DSK1_SCHPO (Protein kinase dsk1 OS=Schizosaccharomyces pombe GN=dsk1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.166e-12
Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = -1
Query:  488 RDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMS--AGPRLR-EPSMAAGE 730
            RD FNR G+LR+I +L+FWP+  VL +KY F+   A+ ++DFL P+L F P KR  A    + PW+   A P  + E + A GE
Sbjct:  451 RDLFNRRGELRNIHKLKFWPLKDVLEQKYHFSAELAQQISDFLSPMLCFDPAKRTNAGYMSNSPWLREVADPTFKIETTGATGE 534          
BLAST of CN189532 vs. ExPASy Swiss-Prot
Match: SKY1_DICDI (Probable serine/threonine-protein kinase sky1 OS=Dictyostelium discoideum GN=sky1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.151e-11
Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = -1
Query:  521 RDFFNRHGDLRHIRRLRF-WPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLSHPWMSAGP 730
            R +F   GDLR I  L   WP+  VL EKY F+ ++AKD   FL+P+L+++PEKR TA  CL+H W+   P
Sbjct:  582 RVYFTHKGDLRKIPDLSDQWPLFSVLTEKYKFSIQEAKDFEAFLLPMLNYLPEKRATAKDCLNHTWLKDVP 652          
The following BLAST results are available for this feature:
BLAST of CN189532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SRPK2_MOUSE1.552e-1652.94Serine/threonine-protein kinase SRPK2 OS=Mus muscu... [more]
SRPK1_PONAB3.457e-1648.53Serine/threonine-protein kinase SRPK1 OS=Pongo abe... [more]
SRPK1_HUMAN3.457e-1648.53Serine/threonine-protein kinase SRPK1 OS=Homo sapi... [more]
SRPK1_MOUSE1.314e-1548.53Serine/threonine-protein kinase SRPK1 OS=Mus muscu... [more]
SRPK3_HUMAN3.822e-1547.76Serine/threonine-protein kinase SRPK3 OS=Homo sapi... [more]
SRPK3_MOUSE6.520e-1547.76Serine/threonine-protein kinase SRPK3 OS=Mus muscu... [more]
SRPK2_HUMAN3.236e-1450.00Serine/threonine-protein kinase SRPK2 OS=Homo sapi... [more]
SKY1_YEAST4.673e-1348.48Serine/threonine-protein kinase SKY1 OS=Saccharomy... [more]
DSK1_SCHPO5.166e-1244.05Protein kinase dsk1 OS=Schizosaccharomyces pombe G... [more]
SKY1_DICDI1.151e-1147.89Probable serine/threonine-protein kinase sky1 OS=D... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002A05_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189532 ID=CN189532; Name=CN189532; organism=Citrus sinensis; type=EST; length=760bp
TTTTTTTTTTTTTTTTTGTGAAACTGTGTTCCAAATAAATCCTAATTCAT
AAGTTTCATACATGGAACCCCCAATAGAAACTCTTTAGATTGTACACAAT
ACAATAAAATAATCTGTTCAACATAGTTTGAGACTATGCTTGAGACATGT
ACATGTTACTTGAAACAAACTTCAACTTTTGCCACTCGCCAATTTCAAAA
TACCACAATCCCATGGCATTACATTAGTCTTCGCATTTTGCACAAATATT
GCAAGCAACATTTTGGCAAAAGATCATGTGAGAGAAGAATATAAAGACAA
CTGGAGGAACTTGTGAGAAACACAACCTGAATGTCTACTTGGGAAGCTTT
AATGCAGCAGCTTCCTGGTCGCTTGATAACTTTGAAGCCCCATTAATGGC
CATATTCCCCACTCCCACTTCCATAGCCTCCCTCTCCTCCTGCTCCCTCC
TCTTTCTTTCAGGTATACTGCCTTCTGTCTCCCGTGGCTCACCAGCAGCC
ATAGAAGGCTCACGCAGTCGAGGTCCTGCACTCATCCATGGATGACTGAG
ACATTGGGCCGCTGTTGGTCTCTTTTCAGGAACGAAATCAAGTATTGGAA
CAAGGAAGTCAGCCATGTCCTTTGCATCTCGCTCATTAAAGTCGTACTTC
TCTACAAGGACCTTATTCATAGGCCAAAAACGTAGACGACGGATGTGCCT
CAAGTCCCCATGTCTGTTGAAGAAATCACGGGGAATAGCGACCACCCAAT
GCAATCTTGC
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