CN189517

Overview
NameCN189517
Unique NameCN189517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189517 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.257e-67
Identity = 138/222 (62.16%), Postives = 157/222 (70.72%), Query Frame = 1
Query:   85 MALVGST---SITPTKSSFVQPQS---QPF--------ITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKT-----SNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNV 693
            MAL  S+   S+ P KS  VQ QS    P          TKP   + PISA+H++DS+K P      +  P P   T     + V   +WTV+SWKSKKALQLPEYP++EEL+SVLKT+++FPPIVFAG             MG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMAGQFAKPRSD FEEKNGVKLPSYRGDNV
Sbjct:    1 MALSSSSTTNSLLPNKSQLVQNQSLLPSPLKNVSFTTNSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSPPAATVTAAATTVTKTEWTVESWKSKKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDNFEEKNGVKLPSYRGDNV 222          
BLAST of CN189517 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.918e-66
Identity = 138/228 (60.53%), Postives = 156/228 (68.42%), Query Frame = 1
Query:   85 MALVGSTSITPTKSSFVQPQSQPFITKPRSN-------------IHPISAVHAADSAK------------PPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNV 693
            MAL  +T+     S+    Q+QP ++ P  N             + PI+AVH++DS K            PP+A  TT  AP  V KT      +W VDSWKSKKALQLPEYPD+EEL SVLKT+D+FPPIVFAG             MG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNV
Sbjct:    1 MALSTNTTTNSLLSNKSLLQNQPLLSSPSKNAFFSNKSTKTVRFVQPIAAVHSSDSNKNPIVSDKPTKSSPPAATATTAPAPA-VTKT------EWAVDSWKSKKALQLPEYPDQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNV 221          
BLAST of CN189517 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 7.649e-65
Identity = 134/206 (65.05%), Postives = 149/206 (72.33%), Query Frame = 1
Query:  112 TPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAK------------PPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNV 693
            +P K++F    S    TK    + PISAVH++DS K            PP+A  TT  AP  V KT      +W VDSWKSKKALQLPEYP++EEL SVLKT+D+FPPIVFAG             MG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNV
Sbjct:   27 SPLKNAFFSNNS----TKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAPA-VTKT------EWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNV 221          
BLAST of CN189517 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.350e-61
Identity = 121/174 (69.54%), Postives = 135/174 (77.59%), Query Frame = 1
Query:  187 ISAVHAADSAKPPSAVKTTTKAPEPVL----KTSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVK-VGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNV 693
            +SAVHAAD AK    V+   KA  P      +   VG  KWTVDSWK+KKALQLPEYP +EEL+SVLKT++ FPP+VFAG             MG+AF+LQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPVVK VGRMAGQFAKPRSD FEE++GVKLPSYRGDN+
Sbjct:   38 VSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQEELDSVLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNI 211          
BLAST of CN189517 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.751e-61
Identity = 128/212 (60.38%), Postives = 148/212 (69.81%), Query Frame = 1
Query:   85 MALVGSTSITPTKSSFV---------QPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNV 693
            MAL  + S++ +KS            QP+   F T      HPISAVHAA+ +K  +AVK                  KW++DSWK+KKALQLPEYPD++ELESVLKTL+  PP+VFAG             +GKAFLLQGGDCAESFKEFNANNIRDTFRILLQM VVLMFGGQ+PV+KVGRMAGQFAKPRSDPFEE NGVKLPSY+GDN+
Sbjct:    1 MALSNTLSLSSSKSLVQSHLLHNPTPQPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGVKLPSYKGDNI 194          
BLAST of CN189517 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.546e-60
Identity = 127/212 (59.91%), Postives = 147/212 (69.34%), Query Frame = 1
Query:   85 MALVGSTSITPTKS---------SFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNV 693
            MAL  + S++ +KS            QP+   F T      HPISAVHAA+ +K  +AVK                  KW++DSWK+KKALQLPEYPD++ELESVLKTL+  PP+VFAG             +GKAFLLQGGDCAESFKEFNANNIRDTFRILLQM VVLMFGGQ+PV+KVGRMAGQFAKPRSDP EE NGVKLPSY+GDN+
Sbjct:    1 MALSNTLSLSSSKSLVQSHLLHNPLPQPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPLEEINGVKLPSYKGDNI 194          
BLAST of CN189517 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 2.383e-58
Identity = 121/223 (54.26%), Postives = 148/223 (66.37%), Query Frame = 1
Query:   88 ALVGSTSITPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPP-----SAVKTTTK------------APEPVLK----TSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNV 693
            ++ G  ++ P  ++     +  F+T  R     + AVHAA+ +K P     SA KT++             AP PV      T  V P +W VDSW++KKALQLPEYP+  ELE+VLKT++ FPPIVFAG             MG+AFLLQGGDCAESFKEFN NNIRDTFR+LLQM  VL FGGQMPV+KVGRMAGQFAKPRS+ FEE++GVKLPSYRGDN+
Sbjct:    8 SMAGGAAVVPRSATATTASA--FVTMKR-RATAVRAVHAAEPSKNPPVGVPSAAKTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKALQLPEYPNAAELEAVLKTIEAFPPIVFAGEARHLEERLADAAMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQMSAVLTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGVKLPSYRGDNI 227          
BLAST of CN189517 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 117/205 (57.07%), Postives = 142/205 (69.27%), Query Frame = 1
Query:   85 MALVGSTSITPTKSSFVQPQSQPFITKPRSNIH--PISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNV 693
            M  + ++S   TKS        P+   PR  I   P+ AVH+ D  K   +   + K               W+++SWKSKKALQLP+YPD+++++SVL+TL  FPPIVFAG             MG+AF+LQGGDCAESFKEFNANNIRDTFR+LLQMGVVLMFGGQ+PV+KVGRMAGQFAKPRSDPFEEK+GVKLPSYRGDN+
Sbjct:    1 MVTLNASSPLTTKSFL------PYRHAPRRPISFSPVFAVHSTDPKKSTQSASASVK---------------WSLESWKSKKALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLGQAAMGQAFMLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNI 184          
BLAST of CN189517 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 5.309e-58
Identity = 113/178 (63.48%), Postives = 138/178 (77.53%), Query Frame = 1
Query:  160 TKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNV 693
            TKP+S ++ ++AVHAA+ A+   +VK +       + +S+ G  KWT +SWK KKALQLP+YP+  ELESVLKT++ FPPIVFAG             +GKAFLLQGGDCAESFKEFNA NIRDTFR+LLQM +VL FGGQ+PV+KVGRMAGQFAKPRSD FEEK+GVKLPSY+GDN+
Sbjct:   38 TKPKS-VNLVTAVHAAEPARNAVSVKES-------VASSSSGALKWTPESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARNLEERLADAAVGKAFLLQGGDCAESFKEFNATNIRDTFRVLLQMSIVLTFGGQVPVIKVGRMAGQFAKPRSDAFEEKDGVKLPSYKGDNI 207          
BLAST of CN189517 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 9.743e-36
Identity = 89/174 (51.15%), Postives = 104/174 (59.77%), Query Frame = 1
Query:  163 KPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPDKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRG 684
            KPRS+    +AVH     K P +  T TK    +L         W  +SWKSKKALQLPEYPD+ +L+ VLKT++ FPP+VFAG             MG AFLLQGGDCAESFKE      R  F+        L FGGQ PV+KVGRMAGQFAKPR DPFEEK+G+ L    G
Sbjct:   36 KPRSSRPISAAVHVTQPPKTPISSATATKRRLSLLNGV------W--ESWKSKKALQLPEYPDEGKLDGVLKTIEAFPPLVFAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKELMPLYSR-YFQNTASDECRLTFGGQCPVIKVGRMAGQFAKPRLDPFEEKDGLWLSGANG 200          
The following BLAST results are available for this feature:
BLAST of CN189517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
AROF_TOBAC6.257e-6762.16Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC6.918e-6660.53Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLTU7.649e-6565.05Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ORYSJ1.350e-6169.54Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLLC8.751e-6160.38Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLTU2.546e-6059.91Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ORYSJ2.383e-5854.26Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ARATH3.113e-5857.07Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ARATH5.309e-5863.48Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_CATRO9.743e-3651.15Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P20_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189517 ID=CN189517; Name=CN189517; organism=Citrus sinensis; type=EST; length=695bp
AGGGTTAAGAGCCTCCGTTTATTTGAAAAAAGGAAAAAAGAAATTCGTTT
CATTTACGTTTCAACAAAAATAAATTAGAACATTATGGCTCTCGTTGGCA
GTACTTCAATTACTCCCACAAAATCATCCTTCGTTCAGCCACAATCTCAG
CCGTTCATCACCAAACCCAGATCAAATATCCATCCCATCTCCGCCGTCCA
TGCTGCTGACTCTGCCAAGCCTCCGTCTGCCGTAAAAACCACAACAAAGG
CACCCGAGCCAGTCCTCAAGACCAGCAATGTGGGTCCCCAAAAATGGACG
GTTGACAGCTGGAAATCCAAGAAGGCTTTGCAGCTGCCGGAGTATCCGGA
CAAAGAGGAGCTCGAGTCCGTGCTGAAAACGCTCGACGACTTCCCGCCGA
TTGTGTTCGCCGGTGAAGCCAGGAGCTTGGAGGAGCGGCTAGCTGAAGCC
GCCATGGGCAAAGCTTTCTTGCTTCAAGGCGGAGATTGCGCTGAGAGTTT
CAAAGAGTTTAATGCTAATAACATTCGTGACACTTTCAGAATCCTTCTCC
AGATGGGTGTTGTGCTAATGTTCGGCGGTCAAATGCCCGTTGTTAAGGTG
GGGAGAATGGCAGGGCAGTTTGCGAAGCCGAGATCGGATCCGTTTGAGGA
GAAGAACGGAGTGAAGCTGCCGAGTTACAGAGGAGATAATGTGAA
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