DR908748

Overview
NameDR908748
Unique NameDR908748
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR908748 vs. ExPASy Swiss-Prot
Match: DR102_ARATH (DNA-damage-repair/toleration protein DRT102 OS=Arabidopsis thaliana GN=DRT102 PE=2 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 6.221e-53
Identity = 92/115 (80.00%), Postives = 104/115 (90.43%), Query Frame = -3 
Query:  203 TCSICCLVKNRELNPVEMIPGGSMKIIRESPTSAIVRFKAGSVEPAHHHTFGHDLVVLQGKKSVWNLTKGERFDLTVGDYLFTPAGDVHRVKYYEETEFFIKWDGRWDMFFDEDL 547
            +C ICCL KNRE  PV+++PGGSMKI+RE+PTSAIVRFKAGSVEPAHHHTFGHDLVV++GKKSVWNL+K ER DL  GDYLFTPAGDVHRVKY+E+TEFFI WDG WD+F DEDL
Sbjct:  185 SCVICCLAKNREFTPVDIMPGGSMKIVRETPTSAIVRFKAGSVEPAHHHTFGHDLVVIKGKKSVWNLSKKERADLVDGDYLFTPAGDVHRVKYHEDTEFFITWDGHWDIFLDEDL 299
The following BLAST results are available for this feature:
BLAST of DR908748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DR102_ARATH6.221e-5380.00DNA-damage-repair/toleration protein DRT102 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16876 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-46_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908748 ID=DR908748; Name=DR908748; organism=Citrus sinensis; type=EST; length=585bp
AGTCTCGAGTTTTTTTTTTTTTTTTTTACACAATTCAATATACGAGTATG
TTCATACTTCACAATACACAATCTCTTGCACAACAAGCAAACAACTCATA
CATTATTCAAAAGCAAACCCATTATTACCCAAACTTAATCTGAATCTTCC
CCATAGAAGCTGATCAAGCAGTTTCCTTCTCAACCGCCTTCTTTGCAGCC
TCAAGATCCTCATCAAAGAACATATCCCAACGCCCATCCCACTTGATGAA
AAACTCAGTCTCTTCGTAATACTTCACTCTATGCACATCACCAGCCGGTG
TAAACAAGTAATCCCCAACAGTCAAATCAAACCTTTCCCCTTTAGTCAGA
TTCCACACACTCTTCTTCCCTTGGAGCACCACCAGATCATGCCCAAATGT
ATGGTGATGCGCGGGCTCCACACTCCCGGCCTTAAACCTCACAATGGCCG
ATGTCGGACTCTCCCTAATAATCTTCATTGACCCACCGGGAATCATTTCC
ACAGGATTCAATTCCCTGTTCTTAACTAAACAACATATGCTACAAGTACT
GCTACTAGAATCACTATCTAATTTATCATTTTTAC
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