CN189490

Overview
NameCN189490
Unique NameCN189490
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3096 contig Csv1_Contig3096:224..964. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189490 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 1.748e-118
Identity = 211/233 (90.56%), Postives = 220/233 (94.42%), Query Frame = 2
Query:   41 RVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIVLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTP 739
            RVS  IRAGAY++ELVKTAK+IASPGRGILAIDESNATCGKRLASI LDNTE NRQAYRQLLLTTPGLGDYISG+ILFEETLYQST DGK FVDCLR+  IVPGIKVDKGL PL GSN ESWCQGLDGLASRS EYYKQGARFAKWRTVVS+PCGPSALAVKEA+WGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLA+NNV+ EGILLKPSMVTP
Sbjct:   34 RVSFAIRAGAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVMFEGILLKPSMVTP 266          
BLAST of CN189490 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 395.586 bits (1015), Expect = 1.483e-109
Identity = 196/232 (84.48%), Postives = 211/232 (90.95%), Query Frame = 2
Query:   44 VSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIVLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTP 739
            VS+ +RAGAY +ELVKTAKTIASPGRGILA+DESNATCGKRLASI L+NTE NRQAYR LL+T PGLG YISGAILFEETLYQST DGKK VD L E+KIVPGIKVDKGLVPL GSNNESWCQGLDGLASR   YY+QGARFAKWRTVVSIP GPS LAVKEA+WGLARYAAISQDNGLVPIVEPEILLDG+H I+RT EVA+KVW+E FFY+AENNV+ EGILLKPSMVTP
Sbjct:   32 VSMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAETFFYMAENNVMFEGILLKPSMVTP 263          
BLAST of CN189490 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 4.039e-107
Identity = 192/228 (84.21%), Postives = 210/228 (92.11%), Query Frame = 2
Query:   56 IRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIVLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTP 739
            IRAG+Y +ELVKTAKTIASPGRGILA+DESNATCGKRLASI L+NTE NRQA+R LL+T P LG+YISGAILFEETLYQSTTDG+K VD L E+ I+PGIKVDKGLVPL GSN+ESWCQGLDGLASRS  YY+QGARFAKWRTVVSIP GPSALAVKEA+WGLARYAAISQDNGLVPIVEPEILLDG+H I+RT EVA+KVW+EVF+YLAENNV  EGILLKPSMVTP
Sbjct:    4 IRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTP 231          
BLAST of CN189490 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 380.178 bits (975), Expect = 6.449e-105
Identity = 188/225 (83.56%), Postives = 205/225 (91.11%), Query Frame = 2
Query:   65 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIVLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTP 739
            G+Y +ELVKTAKTIASPGRGILA+DESNATCGKRL SI L+NTE NRQA+R LL+T P LG+YISGAILFEETLYQST DG+K VD L E+ I+PGIKVDKGLVPL GSNNESWCQGLDGLASRS  YY+QGARFAKWRTVVSIP GPSALAVKEA+WGLARYAAISQDNGLVPIVEPEILLDG+H I+RT EVA+KVW+EVF+YLAENNV  EGILLKPSMVTP
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTP 225          
BLAST of CN189490 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 6.449e-105
Identity = 192/247 (77.73%), Postives = 216/247 (87.45%), Query Frame = 2
Query:    2 RSGSSSSTRFATRRVSVPIRAGA-YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIVLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTP 739
            R  SS+S     R  S+ +RA + Y +ELVKTAKTIASPGRGILA+DESNATCGKRL SI L+NTE NRQA+R LL++ PGLG Y+SGAILFEETLYQSTT+GKK VD L E+ IVPGIKVDKGLVPL GSNNESW QGLDGL+SR+  YY+QGARFAKWRTVVSIP GPSALAVKEA+WGLARYAAISQD+GLVPIVEPEILLDG+H I+RT +VAEKVW+EVFFYLA+NNV+ EGILLKPSMVTP
Sbjct:   27 RQPSSASVVLRNRATSLTVRAASSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTP 273          
BLAST of CN189490 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 377.867 bits (969), Expect = 3.200e-104
Identity = 187/226 (82.74%), Postives = 206/226 (91.15%), Query Frame = 2
Query:   62 AGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIVLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTP 739
            A AY +ELVKTAKTIASPG GI+A+DESNATCGKRLASI L+NTE NRQAYR LL++ PGLG YISGAILFEETLYQSTTDGKK VD L E+ IVPGIKVDKGLVPL GS +ESWCQGLDGLASR+  YY+QGARFAKWRTVVSIP GPSALAVKEA+WGLARYAAISQD+GLVPIVEPEI+LDG+H I+RT +VAEKVW+EVFFYLA+NNV+ EGILLKPSMVTP
Sbjct:   49 ASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTP 274          
BLAST of CN189490 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 370.933 bits (951), Expect = 3.912e-102
Identity = 182/231 (78.79%), Postives = 206/231 (89.18%), Query Frame = 2
Query:   47 SVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIVLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTP 739
            S+ +RA +Y +ELVKTAKT+ASPGRGILA+DESNATCGKRLASI L+NTE NRQAYR LL++ PGLG Y+SGAILFEETLYQSTTDGKK VD L E+ IVPGIKVDKG +PLPGSN+ESWCQGLDGLA RS  YY+QGARFAKWRTVVSIP GPSALAVKEA+WGLARYAAI+QDNGL PI+EPEI+LDG+H I+RT  VA++VW+EVFF LAENNV+LEG  LKPSMV P
Sbjct:   41 SLTVRASSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGP 271          
BLAST of CN189490 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.651e-84
Identity = 157/225 (69.78%), Postives = 187/225 (83.11%), Query Frame = 2
Query:   65 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIVLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEASWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTP 739
            G Y EEL+KTA T+AS GRGILA+DESNATCGKRL SI ++NTE NR+AYR+LL+T PGLG YISGAILFEETLYQST  GKKFVD ++E+ IVPGIKVDKGLVP P +   SWC GLDG  S + EYYK GARFAKWR+VVSIP GPS + +   ++GLARYAAI+Q+ GLVPIVEPE+LLDG+H I+R LEV E +W+E F Y+A+N V+L+GILLKP+MVTP
Sbjct:   28 GKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVPCP-TPTMSWCMGLDGWTS-AAEYYKAGARFAKWRSVVSIPHGPS-IMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTP 249          
BLAST of CN189490 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 5.337e-67
Identity = 133/224 (59.38%), Postives = 163/224 (72.77%), Query Frame = 2
Query:   71 YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIVLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEASWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTP 739
            Y +EL+KTAK IA+PGRGILA DES  T GKR A I ++NTE+NRQAYR+LL T+PG    +SG ILFEETLYQ T+DGK FVD L E  ++PGIKVDKGLV L G+N E+  QGLD L +R  +YY+ GARFAKWR    I    PS L+++E +  LARYA I Q+NGLVPIVEPE+L  G H I++   V E V + VF  L  ++V+LEG LLKP+MVTP
Sbjct:    8 YEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYPCLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGARFAKWRAFFKIGATEPSVLSIQEDARVLARYAIICQENGLVPIVEPEVLTGGSHDIKKCAAVTETVLAAVFKALNYHHVLLEGTLLKPNMVTP 231          
BLAST of CN189490 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 9.103e-67
Identity = 130/226 (57.52%), Postives = 164/226 (72.57%), Query Frame = 2
Query:   65 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIVLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEASWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTP 739
            G Y +EL+  A  IA+PG+ ILA DES  T GKR  SI ++N E+NR+A R+LL TTPG   Y+SG ILFEETLYQ T DGK FVD +++  ++PGIKVDKG V L G+N E+  QGLDGLA R  +YY  GARFAKWR V+ I P  PS LA+ E + GLARY  I Q+NGLVPIVEPEIL+DG H I+R  EV+E+V +  +  L +++V+LEG  LKP++VTP
Sbjct:    6 GKYADELIANASYIATPGKVILAADESTGTIGKRFPSINVENVESNRRALRELLFTTPGALPYLSGVILFEETLYQKTADGKPFVDAMKDGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCAQYYTAGARFAKWRAVLKIGPTEPSPLAILENANGLARYGIICQENGLVPIVEPEILVDGTHDIDRCAEVSERVLAACYKALNDHHVLLEGTSLKPNIVTP 231          
The following BLAST results are available for this feature:
BLAST of CN189490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC3_ARATH1.748e-11890.56Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_ORYSJ1.483e-10984.48Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_PEA4.039e-10784.21Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC2_PEA6.449e-10583.56Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC2_ARATH6.449e-10577.73Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_ARATH3.200e-10482.74Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC_SPIOL3.912e-10278.79Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE1.651e-8469.78Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_ARATH5.337e-6759.38Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL9.103e-6757.52Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P04_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189490 ID=CN189490; Name=CN189490; organism=Citrus sinensis; type=EST; length=741bp
GCGGTCCGGATCTTCTTCTTCGACTCGATTCGCGACTCGCCGCGTCTCCG
TACCGATCCGAGCTGGTGCTTACACTGAGGAACTCGTCAAAACCGCTAAA
ACAATTGCATCACCTGGTCGCGGTATTCTAGCAATTGATGAATCAAATGC
AACCTGTGGGAAGAGGTTGGCATCGATTGTATTGGACAATACAGAGACCA
ATAGACAGGCTTACAGGCAACTTTTGCTGACCACTCCAGGCCTTGGTGAT
TATATTTCTGGTGCCATTCTTTTCGAGGAGACACTGTACCAATCAACTAC
AGATGGAAAAAAGTTTGTGGACTGCTTGCGTGAGGAAAAGATCGTGCCTG
GCATTAAAGTTGACAAGGGTTTGGTTCCTCTACCAGGATCAAACAATGAA
TCGTGGTGCCAAGGCTTGGATGGATTGGCATCAAGATCCACTGAATACTA
CAAGCAAGGTGCTCGATTTGCTAAGTGGAGGACAGTTGTTAGCATTCCAT
GTGGTCCTTCTGCTCTGGCTGTGAAGGAAGCTTCATGGGGCCTTGCACGA
TATGCTGCTATTTCTCAGGATAATGGTCTTGTGCCTATAGTGGAACCCGA
GATCCTTCTTGATGGGGACCACCCAATTGAGAGGACCCTTGAAGTGGCAG
AAAAGGTCTGGTCAGAAGTCTTTTTCTACTTGGCAGAAAACAATGTCGTT
CTTGAGGGAATTCTACTTAAACCCAGCATGGTCACGCCAGG
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