DR908736

Overview
NameDR908736
Unique NameDR908736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_MAIZE (1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.326e-37
Identity = 69/105 (65.71%), Postives = 88/105 (83.81%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYA 316
            +KY FMTS+HQY+SRK + D+VIVFE+G+LVFVFNFH N+SY DYR+GC KPG YK+VLDSD  LFGG+ R+ H AE+F+++  +D+RP+SF VY PSRT VVYA
Sbjct:  692 QKYEFMTSDHQYISRKHEEDKVIVFEKGDLVFVFNFHCNNSYFDYRIGCRKPGVYKVVLDSDAGLFGGFSRIHHAAEHFTADCSHDNRPYSFSVYTPSRTCVVYA 796          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_HUMAN (1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.040e-27
Identity = 54/108 (50.00%), Postives = 78/108 (72.22%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 325
            E+YG++ +   YVS K +G+++I FER  L+F+FNFH + SY+DYRVG   PGK+KIVLDSD   +GG++RLDH+ ++FS    ++ RP+S LVY PSR A++    D
Sbjct:  592 ERYGWLAAPQAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGHQRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNVD 699          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_ORYSJ (1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 5.024e-26
Identity = 57/122 (46.72%), Postives = 83/122 (68.03%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSS--------EGWYDDRPHSFLVYAPSRTAVVYALADEEEQPL 343
            E++ F++S  Q VS  ++ D+VIVFERG+LVFVFNFH N +Y  Y+VGC  PGKY++ LDSD  +FGG+ R+ H+ ++F+S        E  +++RP+SF V +P RT V Y   DE+ + L
Sbjct:  644 EEFSFLSSSKQIVSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALVFGGHGRVGHDVDHFTSPEGMPGVPETNFNNRPNSFKVLSPPRTCVAYYRVDEDREEL 765          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_MOUSE (1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.024e-26
Identity = 53/108 (49.07%), Postives = 75/108 (69.44%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 325
            E+ G++++   YVS K + ++ I FER  L+F+FNFH + SY+DYRVG   PGK+KIVLDSD   +GG++RLDHN  YF+    ++ RP+S LVY PSR A++    D
Sbjct:  592 ERCGWLSAPQAYVSEKHEANKTITFERAGLLFIFNFHPSKSYTDYRVGTATPGKFKIVLDSDAAEYGGHQRLDHNTNYFAEAFEHNGRPYSLLVYIPSRVALILQNVD 699          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_HORSE (1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.561e-26
Identity = 53/108 (49.07%), Postives = 78/108 (72.22%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 325
            E+ G++++   +VS K +G++VI FER  L+F+FNFH + SY++YRVG   PGK+KIVLDSD   +GG++RLDHN ++FS    +++RP S LVY PSR A++    D
Sbjct:  589 ERCGWLSAPQAFVSEKHEGNKVIAFERAALLFIFNFHPSKSYTNYRVGTTLPGKFKIVLDSDAAEYGGHQRLDHNTDFFSEPYEHNERPSSLLVYIPSRVALILQNVD 696          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_FELCA (1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.554e-25
Identity = 50/108 (46.30%), Postives = 77/108 (71.30%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 325
            E+ G++++   +VS K +G+++I FER  LVF+FNFH + SY+DYRVG   PGK++IVLD+D   +GG++RLDH+ E+FS    +++RP S LVY P+R  ++    D
Sbjct:  589 ERCGWLSAPQAFVSEKHEGNKIIAFERAGLVFIFNFHPSKSYTDYRVGTTLPGKFRIVLDTDAAEYGGHQRLDHSTEFFSQPFKHNERPCSLLVYIPNRVGLILQNVD 696          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_YEAST (1,4-alpha-glucan-branching enzyme OS=Saccharomyces cerevisiae GN=GLC3 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 3.981e-23
Identity = 50/108 (46.30%), Postives = 79/108 (73.15%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 325
            +++ ++ ++  YVS K +GD++IVFER NL+F+FNFH  +SYSDYRVG  K G Y IVL+SD   FGG+ R++ ++E+F+++  +++R +   VY PSR A+V AL +
Sbjct:  597 KRHKWLNTKQAYVSLKHEGDKMIVFERNNLLFIFNFHPTNSYSDYRVGVEKAGTYHIVLNSDRAEFGGHNRINESSEFFTTDLEWNNRKNFLQVYIPSRVALVLALKE 704          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_YARLI (1,4-alpha-glucan-branching enzyme OS=Yarrowia lipolytica GN=GLC3 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.199e-23
Identity = 50/110 (45.45%), Postives = 76/110 (69.09%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGW-YDDRPHSFLVYAPSRTAVVYALADE 328
            + YG+++++  YVS K++ D+V+V+ER  LVFVFNFH N S++DYR+G  +PG Y +VLDSD P FGG+ R+DH      +E   ++ R +   +Y PSR A+V+A  D+
Sbjct:  578 DHYGWLSADQAYVSLKNEDDKVVVYERAGLVFVFNFHPNKSFTDYRIGVDQPGTYTLVLDSDSPEFGGFGRIDHEKTRCHTEPLEWNGRANCMHIYIPSRVALVFAREDD 687          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_CRYNE (1,4-alpha-glucan-branching enzyme OS=Cryptococcus neoformans GN=GLC3 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.280e-21
Identity = 48/106 (45.28%), Postives = 70/106 (66.04%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYAL 319
            +KY ++ S   YVS K +GD++IVFER  L+F+FNFH   S++DYRVG    G+YK++L SD   FGG+ R+D    YF++   ++ R +   VY+PSRT +V  L
Sbjct:  577 DKYKWLNSPQAYVSLKHEGDKMIVFERAGLLFIFNFHPTQSFTDYRVGVDTAGEYKVILTSDETRFGGHNRIDMGGRYFTTPMEWNGRKNWLQVYSPSRTVLVLGL 682          
BLAST of DR908736 vs. ExPASy Swiss-Prot
Match: GLGB_ASPOR (1,4-alpha-glucan-branching enzyme OS=Aspergillus oryzae GN=gbeA PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.184e-21
Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 2
Query:    2 EKYGFMTSEHQYVSRKDQGDRVIVFERGNLVFVFNFHWNSSYSDYRVGCLKPGKYKIVLDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 325
            EKYG++ S   YVS K++ D+V+VFER  L+++FNFH  +S++DYRVG  + G Y+IVLD+D P FGG  R      +F+++  ++ R +   VY P+RTA+V AL +
Sbjct:  580 EKYGWLHSPQAYVSLKNETDKVLVFERAGLLWIFNFHPTNSFTDYRVGVEQSGTYRIVLDTDDPAFGGLNRNLKETRFFTTDLSWNGRSNFLQVYIPTRTALVLALEE 687          
The following BLAST results are available for this feature:
BLAST of DR908736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GLGB_MAIZE6.326e-3765.711,4-alpha-glucan-branching enzyme 2, chloroplastic... [more]
GLGB_HUMAN2.040e-2750.001,4-alpha-glucan-branching enzyme OS=Homo sapiens ... [more]
GLGB_ORYSJ5.024e-2646.721,4-alpha-glucan-branching enzyme, chloroplastic/a... [more]
GLGB_MOUSE5.024e-2649.071,4-alpha-glucan-branching enzyme OS=Mus musculus ... [more]
GLGB_HORSE6.561e-2649.071,4-alpha-glucan-branching enzyme OS=Equus caballu... [more]
GLGB_FELCA5.554e-2546.301,4-alpha-glucan-branching enzyme OS=Felis catus G... [more]
GLGB_YEAST3.981e-2346.301,4-alpha-glucan-branching enzyme OS=Saccharomyces... [more]
GLGB_YARLI5.199e-2345.451,4-alpha-glucan-branching enzyme OS=Yarrowia lipo... [more]
GLGB_CRYNE1.280e-2145.281,4-alpha-glucan-branching enzyme OS=Cryptococcus ... [more]
GLGB_ASPOR2.184e-2145.371,4-alpha-glucan-branching enzyme OS=Aspergillus o... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16864 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-21_A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908736 ID=DR908736; Name=DR908736; organism=Citrus sinensis; type=EST; length=586bp
GGAGAAGTACGGGTTCATGACTTCTGAGCACCAATATGTGTCACGGAAGG
ACCAGGGAGACAGGGTAATAGTCTTTGAAAGAGGAAATCTTGTTTTCGTC
TTCAACTTTCATTGGAATAGTAGTTATTCCGACTATCGTGTGGGTTGCTT
GAAACCAGGGAAGTATAAGATTGTCTTGGATTCAGATTATCCACTGTTTG
GAGGCTACAAAAGGCTCGACCACAATGCCGAGTACTTCAGCTCGGAAGGG
TGGTATGATGACCGACCTCATTCCTTCTTGGTATATGCGCCAAGCAGAAC
GGCTGTGGTCTATGCTTTAGCAGATGAAGAAGAGCAACCTCTTAATGTAT
AAAATTAAATAACCATCAGGTTCTATTTAATATGAGAGTTTCGAGAGATC
TCCTTGCTGTGCATCAGCATTCCACTTACCAATCTTGAGAATAAAAGTAC
AGTGAGACTCGTTGAATTTTTGCATCACATAAATTGGGGGAAGTCAGGAT
GAACACGAGGAGAGGACAACATGCATGCTACGTTGCAATTTCATGCGAAG
TATTGGAGACCAATACCGTGTAAAATGTTTCCTGTG
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