DR908735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908735 vs. ExPASy Swiss-Prot
Match: SF3A1_ARATH (Probable splicing factor 3 subunit 1 OS=Arabidopsis thaliana GN=At1g14650 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 2.711e-40 Identity = 83/110 (75.45%), Postives = 94/110 (85.45%), Query Frame = 3 Query: 96 KRQKLDDSMLIPEDQFLAQHPGPVRVTVAVPNVDEGNLKGQLLEITMQSLSETVGSLKEKISGEIQLPANKQKLSGKAGFLKDNMSLAYYNVTTGETLTLSLRERGGRKR 425 KRQK D+S L+PEDQFLAQHPGP + V+ PN ++G Q +EIT+QSLSE VGSLKEKI+GEIQ+PANKQKLSGKAGFLKDNMSLA+YNV GE LTLSLRERGGRKR Sbjct: 680 KRQKFDESALVPEDQFLAQHPGPATIRVSKPNENDG----QFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGGRKR 785
BLAST of DR908735 vs. ExPASy Swiss-Prot
Match: SF3A1_HUMAN (Splicing factor 3 subunit 1 OS=Homo sapiens GN=SF3A1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18 Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 96 KRQKLDDSMLIPEDQFLAQHPGPVRVTVAVPNVD---EGNLKGQLLEITMQSLSETVGSLKEKISGEIQLPANKQKLSGKAGFLKDNMSLAYYNVTTGETLTLSLRERGGRKR 425 K+ K +DS L+PE++FL ++ GPV + V VPN+ E L GQ+L T+ L++ V +K KI +PA KQKL + F+KD+ SLAYYN+ G + L+L+ERGGRK+ Sbjct: 683 KKLKTEDS-LMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQVLVFTLP-LTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGGRKK 793
BLAST of DR908735 vs. ExPASy Swiss-Prot
Match: SF3A1_BOVIN (Splicing factor 3 subunit 1 OS=Bos taurus GN=SF3A1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18 Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 96 KRQKLDDSMLIPEDQFLAQHPGPVRVTVAVPNVD---EGNLKGQLLEITMQSLSETVGSLKEKISGEIQLPANKQKLSGKAGFLKDNMSLAYYNVTTGETLTLSLRERGGRKR 425 K+ K +DS L+PE++FL ++ GPV + V VPN+ E L GQ+L T+ L++ V +K KI +PA KQKL + F+KD+ SLAYYN+ G + L+L+ERGGRK+ Sbjct: 683 KKLKTEDS-LMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQVLVFTLP-LTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAVIHLALKERGGRKK 793
BLAST of DR908735 vs. ExPASy Swiss-Prot
Match: SF3A1_MOUSE (Splicing factor 3 subunit 1 OS=Mus musculus GN=Sf3a1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.469e-17 Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 96 KRQKLDDSMLIPEDQFLAQHPGPVRVTVAVPNVD---EGNLKGQLLEITMQSLSETVGSLKEKISGEIQLPANKQKLSGKAGFLKDNMSLAYYNVTTGETLTLSLRERGGRKR 425 K+ K +DS L+PE++FL ++ GPV + V VPN+ E L GQ L T+ L++ V +K KI +PA KQKL + F+KD+ SLAYYN+ +G + L+L+ERGGRK+ Sbjct: 681 KKLKTEDS-LMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKLNGQGLVFTLP-LTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAVIHLALKERGGRKK 791 The following BLAST results are available for this feature:
BLAST of DR908735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908735 ID=DR908735; Name=DR908735; organism=Citrus sinensis; type=EST; length=586bpback to top |