CN189463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189463 vs. ExPASy Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=1 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.890e-44 Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 3 Query: 519 MFWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 797 MFW+NQMQEIE T DFKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLV Sbjct: 57 MFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 149
BLAST of CN189463 vs. ExPASy Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.147e-41 Identity = 81/92 (88.04%), Postives = 88/92 (95.65%), Query Frame = 3 Query: 522 FWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 797 FW NQ +EIE+T DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLV Sbjct: 62 FWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLV 153
BLAST of CN189463 vs. ExPASy Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=1 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.692e-41 Identity = 80/92 (86.96%), Postives = 87/92 (94.57%), Query Frame = 3 Query: 522 FWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 797 FW Q +EIE+T DFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLV Sbjct: 52 FWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLV 143
BLAST of CN189463 vs. ExPASy Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.268e-40 Identity = 79/93 (84.95%), Postives = 87/93 (93.55%), Query Frame = 3 Query: 519 MFWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 797 MFW+ Q QEIEQ DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLV Sbjct: 59 MFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLV 151
BLAST of CN189463 vs. ExPASy Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.825e-40 Identity = 78/93 (83.87%), Postives = 87/93 (93.55%), Query Frame = 3 Query: 519 MFWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 797 +FW+ Q QEIEQ DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLV Sbjct: 46 LFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLV 138
BLAST of CN189463 vs. ExPASy Swiss-Prot
Match: NFYC_DICDI (Nuclear transcription factor Y subunit gamma OS=Dictyostelium discoideum GN=nfyc-1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.451e-33 Identity = 74/157 (47.13%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 348 YPPYQTAPLVASGTPAVAVPSPTQP------PSTFASSPXXXXXXXXXXXXXXXXXXXXXXXXM-FWSNQMQEIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 797 YP + +GTPA++ PS T P P+T S+P FWS+Q+++I +T DFK H LPLARIKKIMK+D+DV IS+EAP++FAKACE+ ILE+T RSW+HTE NKRRTLQ+ DI ++SR + FDFL+ Sbjct: 187 YPSLNDSSSNGNGTPALSSPSSTTPHPTTPHPTTPTSTPNQRFQSNGSSSFQNQLQNHLENKLSSFWSSQLRDIHKTEDFKTHELPLARIKKIMKSDKDVNKISSEAPILFAKACEILILEMTHRSWVHTEMNKRRTLQRTDIINSLSRCETFDFLI 343
BLAST of CN189463 vs. ExPASy Swiss-Prot
Match: NFYC_RAT (Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus GN=Nfyc PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29 Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 3 Query: 522 FWSNQMQEIEQTA--DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 797 FW M+EI DF+ LPLARIKKIMK DEDV+MISAEAPV+FAKA ++FI ELTLR+WIHTE+NKRRTLQ+NDIA AI++ D FDFL+ Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLI 115
BLAST of CN189463 vs. ExPASy Swiss-Prot
Match: NFYC_PONAB (Nuclear transcription factor Y subunit gamma OS=Pongo abelii GN=NFYC PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29 Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 3 Query: 522 FWSNQMQEIEQTA--DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 797 FW M+EI DF+ LPLARIKKIMK DEDV+MISAEAPV+FAKA ++FI ELTLR+WIHTE+NKRRTLQ+NDIA AI++ D FDFL+ Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLI 115
BLAST of CN189463 vs. ExPASy Swiss-Prot
Match: NFYC_MOUSE (Nuclear transcription factor Y subunit gamma OS=Mus musculus GN=Nfyc PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29 Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 3 Query: 522 FWSNQMQEIEQTA--DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 797 FW M+EI DF+ LPLARIKKIMK DEDV+MISAEAPV+FAKA ++FI ELTLR+WIHTE+NKRRTLQ+NDIA AI++ D FDFL+ Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLI 115
BLAST of CN189463 vs. ExPASy Swiss-Prot
Match: NFYC_HUMAN (Nuclear transcription factor Y subunit gamma OS=Homo sapiens GN=NFYC PE=1 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 2.243e-29 Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 3 Query: 522 FWSNQMQEIEQTA--DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLV 797 FW M+EI DF+ LPLARIKKIMK DEDV+MISAEAPV+FAKA ++FI ELTLR+WIHTE+NKRRTLQ+NDIA AI++ D FDFL+ Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLI 115 The following BLAST results are available for this feature:
BLAST of CN189463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189463 ID=CN189463; Name=CN189463; organism=Citrus sinensis; type=EST; length=797bpback to top |