CN189462

Overview
NameCN189462
Unique NameCN189462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5972 contig Csv1_Contig5972:9..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.129e-28
Identity = 60/100 (60.00%), Postives = 78/100 (78.00%), Query Frame = 2
Query:  374 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVI-GHGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F F+++  AT NFS  NKLG+GGFG VYKG++    EIAVKRL   SGQ  +E KNE  ++A++QHKNLV+LLG CIE+DE++L+YE++ NKSLD FLFD
Sbjct:  327 FDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFD 426          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.189e-27
Identity = 56/101 (55.45%), Postives = 81/101 (80.20%), Query Frame = 2
Query:  371 LFSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            ++ F ++ +AT  FS +NKLGEGGFG VYKG + +G ++AVKRL  KSGQ  +E +NEA ++ ++QH+NLV+LLG C+E++E++LIYE++ NKSLD FLFD
Sbjct:  337 VYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFD 437          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.649e-27
Identity = 58/100 (58.00%), Postives = 77/100 (77.00%), Query Frame = 2
Query:  374 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F F  + +AT  FS  NKLG+GGFG VYKG + +G ++AVKRL   SGQ  KE KNE  V+A++QH+NLVKLLG C+E++E++L+YE++ NKSLD FLFD
Sbjct:  328 FDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFD 427          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.459e-27
Identity = 56/100 (56.00%), Postives = 76/100 (76.00%), Query Frame = 2
Query:  374 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F F ++ +AT  F   NKLG+GGFG VYKG+   G ++AVKRL   SGQ  +E  NE  V+A++QH+NLV+LLG C+E+DER+L+YE++PNKSLD F+FD
Sbjct:  339 FDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFD 438          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.007e-26
Identity = 56/100 (56.00%), Postives = 78/100 (78.00%), Query Frame = 2
Query:  374 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            FSF ++ +AT  FS +N +G GGFG VY+G +  G E+AVKRL   SGQ  +E KNEA +++++QHKNLV+LLG C+E +E++L+YE++PNKSLD FLFD
Sbjct:  333 FSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFD 432          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26
Identity = 56/99 (56.57%), Postives = 77/99 (77.78%), Query Frame = 2
Query:  374 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVI-GHGEIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLF 667
            F F ++ +AT  FS  NKLG+GGFG VYKG++    E+AVKRL   SGQ  +E KNE  ++A++QHKNLV+LLG C+E+DE++L+YE++PNKSL+ FLF
Sbjct:  309 FDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLF 407          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26
Identity = 57/100 (57.00%), Postives = 76/100 (76.00%), Query Frame = 2
Query:  374 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F F ++ +AT  F   NKLG+GGFG VYKG +  G ++AVKRL   SGQ  KE +NE  V+A++QH+NLVKLLG C+E +E++L+YE++PNKSLD FLFD
Sbjct:  314 FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFD 413          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26
Identity = 57/100 (57.00%), Postives = 76/100 (76.00%), Query Frame = 2
Query:  374 FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F F ++ +AT NF  +NKLG GGFG V+KG   +G E+AVKRL   SGQ  +E KNE  ++A++QH+NLV+LLG  +E +E++L+YEYMPNKSLD FLFD
Sbjct:  323 FDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFD 422          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26
Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 2
Query:  365 FPLFSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            F    F ++  AT NF+  NKLG+GGFG VYKG + +G E+AVKRL   S Q  +E KNE  ++A++QH+NLVKLLG C+E +E++L+YE++PNKSLD FLFD
Sbjct:  352 FQQLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFD 454          
BLAST of CN189462 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26
Identity = 63/123 (51.22%), Postives = 85/123 (69.11%), Query Frame = 2
Query:  332 CKKGCEKEVDQFPL---------FSFSSVSSATGNFSAANKLGEGGFGTVYKGVIGHG-EIAVKRLLGKSGQEIKELKNEASVIAQVQHKNLVKLLGCCIEKDERLLIYEYMPNKSLDCFLFD 670
            CK+  +K+  + P+         F   ++ +ATGNFS  NKLG GGFG VYKG++ +G EIAVKRL   SGQ   E KNE  V+A++QH NLV+LLG  ++ +E+LL+YE++PNKSLD FLFD
Sbjct:  324 CKRRKQKQEIELPIVLNEAESVQFDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFD 446          
The following BLAST results are available for this feature:
BLAST of CN189462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
CRK31_ARATH3.129e-2860.00Putative cysteine-rich receptor-like protein kinas... [more]
CRK11_ARATH1.189e-2755.45Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
CRK5_ARATH2.649e-2758.00Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK4_ARATH3.459e-2756.00Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK35_ARATH1.007e-2656.00Putative cysteine-rich receptor-like protein kinas... [more]
CRK32_ARATH1.315e-2656.57Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH1.717e-2657.00Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK16_ARATH1.717e-2657.00Putative cysteine-rich receptor-like protein kinas... [more]
CRK12_ARATH1.717e-2655.34Putative cysteine-rich receptor-like protein kinas... [more]
CRK17_ARATH2.929e-2651.22Cysteine-rich receptor-like protein kinase 17 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001O10_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001O10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189462 ID=CN189462; Name=CN189462; organism=Citrus sinensis; type=EST; length=671bp
TTTTTTTTNCATTTTCTTCAATATTAACTCTCTCTTAGTTCAGGCAAGTA
AGCATTAATTTCATCTTATCTTATTATCAATGGAACGCTGCCCAATCTTC
ATCTCAATTATTGCTTCAGTATCTCTTATCTTCTTGATCTTATCGTTCAC
TATAACCACAAATCGAACTATTTTTCTCGCCCTATCAGCTACTCTAGCTG
GACTGGCCGCCTTGGGCTTGACAATTTTTTGTTTCAGGAGAAATACCACA
AACAAAGGGGAGGATTTGATGAAATTTGATCTGGGTATGAACCTAAAGGT
TGATGTAGAGCTTACAGAAGGCAATAATAAATGCAAAAAAGGGTGCGAAA
AGGAAGTTGATCAATTTCCCTTGTTCAGTTTTTCCAGTGTTTCTTCTGCA
ACTGGTAATTTCTCCGCAGCAAATAAGCTTGGCGAAGGAGGCTTCGGAAC
TGTTTACAAGGGAGTAATAGGGCATGGTGAGATAGCTGTGAAAAGGCTTT
TAGGAAAATCCGGACAGGAGATAAAAGAGTTAAAAAACGAAGCATCGGTA
ATAGCCCAGGTTCAACACAAGAATCTTGTTAAACTCTTGGGTTGCTGCAT
TGAGAAAGATGAGAGGTTATTGATCTATGAGTACATGCCAAATAAAAGCT
TGGATTGCTTCCTCTTTGATC
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