CN189452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY3E_ORYSJ (Alpha-amylase isozyme 3E OS=Oryza sativa subsp. japonica GN=AMY1.4 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP + MQGYAYILTHPG P +FYDH+F + + EI L +R RN IH S ++I+KAE D+Y A+ID KV KLGP + ++ V G DY VWE Sbjct: 320 WPFPSDKVMQGYAYILTHPGIPCIFYDHVFDWNLQHEIATLAEIRSRNGIHAESTLDILKAEGDIYVAMIDGKVITKLGPRYDAGGIIPSDFHVVAHGNDYCVWE 424
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY3D_ORYSJ (Alpha-amylase isozyme 3D OS=Oryza sativa subsp. japonica GN=AMY1.3 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22 Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP + MQGYAYILTHPG P +FYDH+F + +QEI AL ++R+RN I+ S++ IV A+ D Y A++DEKV +K+G + + ++ G+DY VWE Sbjct: 320 WPFPSDKVMQGYAYILTHPGVPCIFYDHMFDWNLKQEITALAAIRERNGINAGSKLRIVVADADAYVAVVDEKVMVKIGTRYDVGNAVPSDFHQTVHGKDYSVWE 424
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY6_HORVU (Alpha-amylase type B isozyme OS=Hordeum vulgare GN=AMY1.6 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.229e-22 Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGP----GHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP R MQGYAYILTHPG P +FYDH F ++EI+ L+S+R R IH S+++I++A+ D+Y A I+ KV +KLGP GH P + + V G DY VWE Sbjct: 323 WPFPSDRVMQGYAYILTHPGNPCIFYDHFFDWGLKEEIDRLVSIRTRQGIHSESKLQIMEADADLYLAEIEGKVIVKLGPRYDVGHLIP----EGFKVVAHGNDYAVWE 427
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY2_HORVU (Alpha-amylase type B isozyme OS=Hordeum vulgare GN=AMY1.2 PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 5.229e-22 Identity = 52/105 (49.52%), Postives = 68/105 (64.76%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP R MQGYAYILTHPGTP +FYDH F ++EI+ L+SVR R+ IH S+++I++A+ D+Y A ID KV +KLGP + + G DY VWE Sbjct: 321 WPFPSDRVMQGYAYILTHPGTPCIFYDHFFDWGLKEEIDRLVSVRTRHGIHNESKLQIIEADADLYLAEIDGKVIVKLGPRYDVGNLIPGGFKVAAHGNDYAVWE 425
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY3B_ORYSJ (Alpha-amylase isozyme 3B OS=Oryza sativa subsp. japonica GN=AMY1.6 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.920e-22 Identity = 50/105 (47.62%), Postives = 69/105 (65.71%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP + MQGYAYILTHPG P +FYDH+F + +QEI L +VR RN+IH S+++I+ AE DVY A+ID+KV K+G + ++ V G +Y +WE Sbjct: 321 WPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNLKQEISTLAAVRSRNEIHPGSKLKILAAEGDVYVAMIDDKVITKIGTRYDVGNLIPSDFHVVAHGNNYCIWE 425
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY3C_ORYSJ (Alpha-amylase isozyme 3C OS=Oryza sativa subsp. japonica GN=AMY1.7 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.427e-21 Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP + MQGYAYILTHPG P +FYDH+F + +QEI L +VR RN IH S++ I+ A+ DVY A+ID+KV K+G + ++ V G +Y VWE Sbjct: 321 WPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNLKQEISTLAAVRSRNGIHPGSKLNILAADGDVYVAMIDDKVITKIGTRYDVGNLIPSDFHVVAHGNNYCVWE 425
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMYA_VIGMU (Alpha-amylase OS=Vigna mungo GN=AMY1.1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21 Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGP----GHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP + MQGYAYILTHPGTPS+FYDH F +++I L S+R RN I+ +S V+I+ +E D+Y A ID K+ +K+GP G+ P N T G+DY VWE Sbjct: 317 WPFPSDKVMQGYAYILTHPGTPSIFYDHFFDWGLKEQIAKLSSIRLRNGINEKSTVKIMASEGDLYVAKIDNKIMVKIGPKMDLGNLIP----SNLHVATSGQDYAVWE 421
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY3A_ORYSJ (Alpha-amylase isozyme 3A OS=Oryza sativa subsp. japonica GN=AMY1.2 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21 Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGP----GHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP + + GYAYILTHPG P +FYDH+F + +QEI AL + RKRN I+ S++ ++ AE D+Y A++DE+V K+GP G+ P ++ V G DY VWE Sbjct: 323 WPFPSDKVILGYAYILTHPGVPCIFYDHVFDWNLKQEINALAATRKRNGINAGSKLRVLAAESDMYVAMVDERVITKIGPRIDVGNIIP----SDFHIVAHGNDYCVWE 427
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY4_HORVU (Alpha-amylase type B isozyme (Fragment) OS=Hordeum vulgare GN=AMY1.4 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21 Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEP----PSGSQNWCFVTEGRDYKVWE 733 W FP R MQGYAYILTHP TP +FYDH F ++EI+ L+SVR R+ IH S+++I++A+ D+Y A ID KV +KLGP Y+ P G + G DY VWE Sbjct: 47 WPFPSDRVMQGYAYILTHPRTPCIFYDHFFDWGPKEEIDRLVSVRTRHGIHNESKLQIIEADADLYLAEIDGKVIVKLGP-RYDVGNLIPGGFEG---AAHGNDYAVWE 151
BLAST of CN189452 vs. ExPASy Swiss-Prot
Match: AMY3_WHEAT (Alpha-amylase AMY3 OS=Triticum aestivum GN=AMY1.1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.392e-20 Identity = 54/109 (49.54%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 422 WRFPGGREMQGYAYILTHPGTPSVFYDHIFS-HYRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGP----GHYEPPSGSQNWCFVTEGRDYKVWE 733 W FP + MQGYAYILTHPG P +FYDH+F +QEI AL +VR RN IH S ++I+KAE D+Y A I KV K+G G PSG + +G +Y VWE Sbjct: 304 WPFPSDKVMQGYAYILTHPGIPCIFYDHVFDWKLKQEITALATVRSRNGIHPGSTLDILKAEGDLYVAKIGGKVITKIGSRYNIGDNVIPSGFK---IAAKGNNYCVWE 409 The following BLAST results are available for this feature:
BLAST of CN189452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189452 ID=CN189452; Name=CN189452; organism=Citrus sinensis; type=EST; length=739bpback to top |