CN189405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189405 vs. ExPASy Swiss-Prot
Match: WOX13_ARATH (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana GN=WOX13 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.782e-58 Identity = 125/216 (57.87%), Postives = 151/216 (69.91%), Query Frame = 2 Query: 59 MEWDNIRXXXXXXXXXXXXXXNHRGGENDNNSVVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLRILESIFDRGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSANTLHNXXXXXXXXXXXXXDSEVETDVDSLLLHDEH*TTKPENL 706 MEWDN N +G + + S G MYVKVMTDEQ ETLRKQIA+Y TICE+LVEMHK+L+A QDLA GGR+G +Y DP+M+S G HK++ARQRWTPTPVQL+ILE IFD+GTGTPSKQKIK+IT ELSQHGQI+E NVYNWFQNRRARSKRKQ S+ + +SEVET+V++L +E +PE+L Sbjct: 2 MEWDN------QLQPNNHHSSNLQGIDVNGGSGAGGGMYVKVMTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLA--GGRMGGLYADPMMSSLG-HKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNG-------------ESEVETEVEAL---NEKRVVRPESL 192
BLAST of CN189405 vs. ExPASy Swiss-Prot
Match: WOX8_ORYSJ (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica GN=WOX8 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.409e-56 Identity = 108/147 (73.47%), Postives = 125/147 (85.03%), Query Frame = 2 Query: 140 NDNNSVVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLRILESIFDRGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSAN 580 +D G+ YVKVMTDEQ+E LRKQI++YATICEQLVEMH++L+A QD + AG RLGN+YCDPLM GG HKI+ARQRWTPTP+QL+ILE+IFD+G GTPSKQKIK+IT ELSQHGQISETNVYNWFQNRRARSKRKQ + N Sbjct: 15 DDRGGGEGGLGYVKVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQD-SIAGMRLGNLYCDPLMVPGG-HKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQAALPNNN 159
BLAST of CN189405 vs. ExPASy Swiss-Prot
Match: WOX14_ARATH (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana GN=WOX14 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 84/148 (56.76%), Postives = 111/148 (75.00%), Query Frame = 2 Query: 137 ENDNNSVVNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLRILESIFDRGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQLVSSSAN 580 E + + NG +VMT+EQ+E LRKQIAVYA IC+QLV +H SLS++ L++ + Y DP+ S H+IS R RWTPT QL+ILESI+D G+GTP++++I+EI ELS+HGQI+ETNVYNWFQNRRARSKRKQ +++AN Sbjct: 15 EEMDREIQNGAYSGRVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTAN 162
BLAST of CN189405 vs. ExPASy Swiss-Prot
Match: WOX10_ARATH (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana GN=WOX10 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.676e-39 Identity = 78/134 (58.21%), Postives = 102/134 (76.12%), Query Frame = 2 Query: 158 VNGVMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKSLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLRILESIFDRGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 559 +NG +VMTDEQ+ETLRKQIA+YA +C+QLV +H SLS+ L++ + Y DP++ S H +S R RWTPT QL+ILE+I+ G+GTP+ ++IKEIT+ELS+HGQI E NVY+WFQNRRARSKRKQ Sbjct: 6 LNGRYGSRVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAHGMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRARSKRKQ 139
BLAST of CN189405 vs. ExPASy Swiss-Prot
Match: WOX7_ORYSJ (WUSCHEL-related homeobox 7 OS=Oryza sativa subsp. japonica GN=WOX7 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13 Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 269 SLSAHQDLAAAGGRLGNIYCDPLMTSGGGHKISARQRWTPTPVQLRILESIFDRGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 556 SL + +AGG ++ P + G + RW P P Q+RILE+IF+ G P + +I I ++L ++GQ+ + NV+ WFQNR++RSK K Sbjct: 33 SLLSGSSAGSAGGGGYSLKSSPFSSVGEERVPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSKNK 128
BLAST of CN189405 vs. ExPASy Swiss-Prot
Match: WOX8_ARATH (WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana GN=WOX8 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 2 Query: 371 RQRWTPTPVQLRILESIFDRGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 556 + RW P P Q+RILESIF+ GT P +++I+ I + L ++GQI + NV+ WFQNR++R+K K Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAKHK 114
BLAST of CN189405 vs. ExPASy Swiss-Prot
Match: WOX9_ARATH (WUSCHEL-related homeobox 9 OS=Arabidopsis thaliana GN=WOX9 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.635e-12 Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 2 Query: 371 RQRWTPTPVQLRILESIFDRGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRK 556 + RW P P Q+RILE+IF+ G P +++I+ I +L ++GQ+ + NV+ WFQNR++RSK K Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114
BLAST of CN189405 vs. ExPASy Swiss-Prot
Match: WOX5_ORYSJ (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica GN=WOX5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.635e-12 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 302 GGRLGNI------YCDPLMTSGGGHKISARQRWTPTPVQLRILESIFDRGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 559 GGR G PL + A RWTPT Q+ +LE ++ +G TP+ ++I++IT L +HG I NV+ WFQN +AR ++KQ Sbjct: 13 GGRAGGFSDPPSPLSPPLSPASAAAAALANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQ 104
BLAST of CN189405 vs. ExPASy Swiss-Prot
Match: WOX5_ORYSI (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.635e-12 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 302 GGRLGNI------YCDPLMTSGGGHKISARQRWTPTPVQLRILESIFDRGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 559 GGR G PL + A RWTPT Q+ +LE ++ +G TP+ ++I++IT L +HG I NV+ WFQN +AR ++KQ Sbjct: 13 GGRAGGFSDPPSPLSPPLSPASAAAAALANARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQ 104
BLAST of CN189405 vs. ExPASy Swiss-Prot
Match: WOX1_ARATH (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.135e-12 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 362 ISARQRWTPTPVQLRILESIFDRGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 559 + RW PTP QLR+LE ++ +GT TPS I++IT +L ++G+I NV+ WFQN +AR ++K+ Sbjct: 71 VMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKR 136 The following BLAST results are available for this feature:
BLAST of CN189405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189405 ID=CN189405; Name=CN189405; organism=Citrus sinensis; type=EST; length=727bpback to top |