CN189398

Overview
NameCN189398
Unique NameCN189398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:247..942. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189398 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 353.599 bits (906), Expect = 5.802e-97
Identity = 170/233 (72.96%), Postives = 199/233 (85.41%), Query Frame = 3
Query:    3 KAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARF---GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGSGMAFQLYESGIF 692
            ++ N+L EK++RFEIFKDNLRF+DEHN +N +Y++GL RFADLTN+EYRS YLGA+    G +RTSL      RY  RVG+ LP+S+DWRKKGAVAEVKDQG CGSCWAFSTI AVEGIN+IVTG LI+LSEQELVDCDTSYNEGCNGGLMDYAFEFII NGGIDT++DYPYK +DG+CD  RKNAKVVTID YEDVP   E++L+KAVA+QP+S+AIE  G AFQLY+SGIF
Sbjct:   61 QSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSL------RYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIF 287          
BLAST of CN189398 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 342.813 bits (878), Expect = 1.024e-93
Identity = 171/235 (72.77%), Postives = 192/235 (81.70%), Query Frame = 3
Query:    3 KAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGSGMAFQLYESGIFT 695
            K+YNA+GE+E+R+  F+DNLR+IDEHN+       ++++GLNRFADLTNEEYR  YLG R   +R   + K SDRYL    EALP+SVDWR KGAVAE+KDQG CGSCWAFS IAAVEGIN+IVTG LISLSEQELVDCDTSYNEGCNGGLMDYAF+FII+NGGIDTE+DYPYK  D  CD  RKNAKVVTID YEDV  N E +LQKAVANQPVSVAIE  G AFQLY SGIFT
Sbjct:   49 KSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRR---ERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFT 280          
BLAST of CN189398 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 308.531 bits (789), Expect = 2.141e-83
Identity = 148/230 (64.35%), Postives = 185/230 (80.43%), Query Frame = 3
Query:   18 LGEKEKRFEIFKDNLRFIDEHNSENR--TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR-SDRYLPRV-GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGSGMAFQLYESGIFT 695
            + +++KRF IFKDNLRFID HN +N+  TYK+GL +F DLTN+EYR +YLGAR    R   K+K  + +Y   V G+ +P++VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG LISLSEQELVDCD SYN+GCNGGLMDYAF+FI+ NGG++TE+DYPY+   G C+++ KN++VV+ID YEDVP  DE AL+KA++ QPVSVAIE  G  FQ Y+SGIFT
Sbjct:   67 INDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFT 296          
BLAST of CN189398 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 6.886e-82
Identity = 151/235 (64.26%), Postives = 188/235 (80.00%), Query Frame = 3
Query:    3 KAYNALGEKEKRFEIFKDNLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAID-GSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGSGMAFQLYESGIFT 695
            K YN LGEKE+RF+IFKDNL+F+DEHNS  +RT++VGL RFADLTNEE+R++YL  +    + S+K+   +RYL + G+ LPD VDWR  GAV  VKDQG+CGSCWAFS + AVEGIN+I TG LISLSEQELVDCD  + N GC+GG+M+YAFEFI+ NGGI+T++DYPY A D G C+  +  N +VVTID YEDVP +DEK+L+KAVA+QPVSVAIE S  AFQLY+SG+ T
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKT---ERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMT 284          
BLAST of CN189398 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.696e-80
Identity = 147/230 (63.91%), Postives = 183/230 (79.57%), Query Frame = 3
Query:   18 LGEKEKRFEIFKDNLRFIDEHNSENR--TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSD-RYLPRVG-EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGSGMAFQLYESGIFT 695
            + ++++RF IFKDNLRFID HN  N+  TYK+GL  FA+LTN+EYRS+YLGAR    R   K+K  + +Y   V  + +P +VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG L+SLSEQELVDCD SYN+GCNGGLMDYAF+FI+ NGG++TE+DYPY   +G C++  KN++VVTID YEDVP  DE AL++AV+ QPVSVAI+  G AFQ Y+SGIFT
Sbjct:   22 INQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFT 251          
BLAST of CN189398 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 2.449e-79
Identity = 149/233 (63.95%), Postives = 180/233 (77.25%), Query Frame = 3
Query:    3 KAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGSGMAFQLYESGIFT 695
            K+YN+LGE E+RFEIFK+ LRFIDEHN++ NR+YKVGLN+FADLT+EE+RS YLG   G+ +T    K S+RY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQEL+DC  + N  GCNGG +   F+FII+NGGI+TEE+YPY A DG C+   +N K VTID YE+VP N+E ALQ AV  QPVSVA++ +G AF+ Y SGIFT
Sbjct:   51 KSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFT 279          
BLAST of CN189398 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 292.738 bits (748), Expect = 1.215e-78
Identity = 148/233 (63.52%), Postives = 179/233 (76.82%), Query Frame = 3
Query:    3 KAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGSGMAFQLYESGIFT 695
            K+YN+LGE E+RFEIFK+ LRFIDEHN++ NR+YKVGLN+FADLT+EE+RS YL    G+ +T    K S+RY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQEL+DC  + N  GCNGG +   F+FII+NGGI+TEE+YPY A DG C+   +N K VTID YE+VP N+E ALQ AV  QPVSVA++ +G AF+ Y SGIFT
Sbjct:   51 KSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFT 279          
BLAST of CN189398 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 2.073e-78
Identity = 145/233 (62.23%), Postives = 182/233 (78.11%), Query Frame = 3
Query:   12 NALG-EKEKRFEIFKDNLRFIDEHNS---ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTS-YNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGSGMAFQLYESGIFT 695
            NALG E E+RF +F DNL+F+D HN+   E   +++G+NRFADLTNEE+R+ +LGA+   +  +      +RY     E LP+SVDWR+KGAVA VK+QG CGSCWAFS ++ VE IN++VTG +I+LSEQELV+C T+  N GCNGGLMD AF+FII NGGIDTE+DYPYKA+DG CD  R+NAKVV+ID +EDVP NDEK+LQKAVA+QPVSVAIE  G  FQLY SG+F+
Sbjct:   65 NALGGEHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAA----GERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFS 293          
BLAST of CN189398 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 2.708e-78
Identity = 138/230 (60.00%), Postives = 179/230 (77.83%), Query Frame = 3
Query:    3 KAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGSGMAFQLYESGIF 692
            KAY  + EK  RFE+FKDNL+ IDE N + ++Y +GLN FADL++EE++ MYLG +    R   +   ++ +  R  EA+P SVDWRKKGAVAEVK+QGSCGSCWAFST+AAVEGINKIVTG+L +LSEQEL+DCDT+YN GCNGGLMDYAFE+I+ NGG+  EEDYPY   +G+C+  +  ++ VTI+ ++DVP NDEK+L KA+A+QP+SVAI+ SG  FQ Y  G+F
Sbjct:   60 KAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAE-FAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVF 288          
BLAST of CN189398 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.623e-73
Identity = 134/230 (58.26%), Postives = 171/230 (74.35%), Query Frame = 3
Query:    3 KAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGSGMAFQLYESGIF 692
            KAY ++ EK  RFE+F++NL  ID+ N+E  +Y +GLN FADLT+EE++  YLG      + S K + S  +  R    LP SVDWRKKGAVA VKDQG CGSCWAFST+AAVEGIN+I TG+L SLSEQEL+DCDT++N GCNGGLMDYAF++II  GG+  E+DYPY   +G C   +++ + VTI  YEDVP ND+++L KA+A+QPVSVAIE SG  FQ Y+ G+F
Sbjct:   60 KAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLG--LAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVF 287          
The following BLAST results are available for this feature:
BLAST of CN189398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
RD21A_ARATH5.802e-9772.96Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ1.024e-9372.77Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
GCP1_ARATH2.141e-8364.35Germination-specific cysteine protease 1 OS=Arabid... [more]
CPR1_ARATH6.886e-8264.26Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CYSP4_BRANA1.696e-8063.91Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
ACTN_ACTDE2.449e-7963.95Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH1.215e-7863.52Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ORYB_ORYSJ2.073e-7862.23Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
XCP2_ARATH2.708e-7860.00Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
XCP1_ARATH2.623e-7358.26Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001M18_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001M18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189398 ID=CN189398; Name=CN189398; organism=Citrus sinensis; type=EST; length=696bp
GCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTTTGAGATCTTT
AAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTA
CAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGT
CCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCA
AAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTC
TGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAA
GCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAGAGGGTATA
AACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGT
GGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACT
ATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACACAGAAGAAGAT
TACCCCTACAAAGCCATTGATGGTAGCTGTGACACATATCGGAAAAATGC
CAAAGTAGTTACAATTGATGACTATGAAGATGTTCCCCTAAATGACGAGA
AAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTTGCCATTGAA
GGAAGTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGG
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