CN189391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189391 vs. ExPASy Swiss-Prot
Match: TAF1A_ARATH (Transcription initiation factor TFIID subunit 1-A OS=Arabidopsis thaliana GN=HAF1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.312e-38 Identity = 72/101 (71.29%), Postives = 86/101 (85.15%), Query Frame = -2 Query: 323 RENTELSYLYLKPVAKKEAPDYLDIIERPMDLSTIRGKVRRMEYKDREDFRHDVWQIAFNAHKYNDGRHPAIPPLADQLLELCDYLIDEYHESLSAAEAGI 625 R E+S L+LKPV+KKEAPDYLDI+E PMDLSTIR KVR++EY++RE FRHDVWQI +NAH YNDGR+P IPPLADQLLE+CDYL+D+Y + L AE GI Sbjct: 1815 RLKEEVSRLFLKPVSKKEAPDYLDIVENPMDLSTIRDKVRKIEYRNREQFRHDVWQIKYNAHLYNDGRNPGIPPLADQLLEICDYLLDDYEDQLKEAEKGI 1915
BLAST of CN189391 vs. ExPASy Swiss-Prot
Match: TAF1B_ARATH (Transcription initiation factor TFIID subunit 1-B OS=Arabidopsis thaliana GN=HAF2 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.950e-35 Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = -2 Query: 323 ENTELSYLYLKPVAKKEAPDYLDIIERPMDLSTIRGKVRRMEYKDREDFRHDVWQIAFNAHKYNDGRHPAIPPLADQLLELCDYLIDEYHESLSAAEAGI 622 + +SYL+LKPV KKEAP+YL+I++ PMDLSTIR KVRRMEY+DR+ FRHDVWQI FNAH YNDGR+ +IPPLAD+LL CD L+DEY + L AE GI Sbjct: 1679 KEVNVSYLFLKPVTKKEAPNYLEIVKCPMDLSTIRDKVRRMEYRDRQQFRHDVWQIKFNAHLYNDGRNLSIPPLADELLVKCDRLLDEYRDELKEAEKGI 1778
BLAST of CN189391 vs. ExPASy Swiss-Prot
Match: TAF1_ORYSJ (Transcription initiation factor TFIID subunit 1 OS=Oryza sativa subsp. japonica GN=TAF1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.450e-34 Identity = 69/96 (71.88%), Postives = 78/96 (81.25%), Query Frame = -2 Query: 320 SYLYLKPVAKKEAPDYLDIIERPMDLSTIRGKVRRMEYKDREDFRHDVWQIAFNAHKYNDGRHPAIPPLADQLLELCDYLIDEYHESLSAAEAGIQ 607 S+L+ KPV KKEAPDY DIIERPMDL TIR KVR+MEYK+REDFRHDV QIA NAH YN RHP IPPLAD+LLELCDYL++E + L AE I+ Sbjct: 1714 SFLFRKPVTKKEAPDYFDIIERPMDLGTIRDKVRKMEYKNREDFRHDVAQIALNAHTYNLNRHPHIPPLADELLELCDYLLEESADVLDDAEYAIE 1809 The following BLAST results are available for this feature:
BLAST of CN189391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189391 ID=CN189391; Name=CN189391; organism=Citrus sinensis; type=EST; length=626bpback to top |