CN189383

Overview
NameCN189383
Unique NameCN189383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189383_ssr37 microsatellite CN189383_ssr37:37..48. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6779 contig Csv1_Contig6779:597..1244. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189383 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 8.234e-47
Identity = 91/185 (49.19%), Postives = 124/185 (67.03%), Query Frame = -2
Query:   93 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQIS 647
            KV+L+GHS GG++L LA + +P KISVAVF++A MPD  H  ++  E+Y+EK     D  LD+QFS         +SM+ G +F+ +K++Q C  EDLELAKML RPGS+F  +L+K  KFS E YGSVKR Y+ C ED   P +FQ W +++   ++V EIK  DHM MLS P+++C CL  IS
Sbjct:   80 KVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPA--DMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGMLSQPREVCKCLLDIS 262          
BLAST of CN189383 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 8.540e-36
Identity = 78/190 (41.05%), Postives = 119/190 (62.63%), Query Frame = -2
Query:   84 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLKY 647
            +++LVGHSLGG++LALA ++FP K++ AVF+ A MP         LE++  ++  + D ++D++    + +     ++L G + L  K+Y   PPEDL LA MLVRPG+ +ID+  +  E+  ++  YGSVKRV+LV  +D    ++ Q W I   P  EV E+ G DHMAM S P++LCD L +I+ KY
Sbjct:   75 RLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRI--KPDFFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDDASSDEEMQRWTIDLSPGVEVEELAGADHMAMCSKPRELCDLLLRIAAKY 262          
BLAST of CN189383 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 8.540e-36
Identity = 78/190 (41.05%), Postives = 119/190 (62.63%), Query Frame = -2
Query:   84 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLKY 647
            +++LVGHSLGG++LALA ++FP K++ AVF+ A MP         LE++  ++  + D ++D++    + +     ++L G + L  K+Y   PPEDL LA MLVRPG+ +ID+  +  E+  ++  YGSVKRV+LV  +D    ++ Q W I   P  EV E+ G DHMAM S P++LCD L +I+ KY
Sbjct:   75 RLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRI--KPDFFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDDASSDEEMQRWTIDLSPGVEVEELAGADHMAMCSKPRELCDLLLRIAAKY 262          
BLAST of CN189383 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.326e-33
Identity = 72/188 (38.30%), Postives = 112/188 (59.57%), Query Frame = -2
Query:   84 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLKY 647
            KVILVG S GG+ +A+AADK+  KI+ AVF  + +PDT H PS+V+++  E        W DT +            +  G   L   +Y LC PE+ ELAKML R GS+F + L+K   F+ EGYGS+K++Y+  ++D     +FQ W I+NY  ++V +++GGDH   L+  +++ + L +++  Y
Sbjct:   73 KVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF----PDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQEVADTY 256          
BLAST of CN189383 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 5.181e-33
Identity = 76/190 (40.00%), Postives = 113/190 (59.47%), Query Frame = -2
Query:   84 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLKY 647
            +++LVGHS GG+++ALA ++FP K++ AVFV A MP          E++  +   E    +D +    + S  S +++  G  FL  K YQ  P EDL LAKMLVRPG+ F+D+  +  ES  ++  YGSVK+VY++ + D    ++ Q WM+   P  +V EI G DH  M S P++LCD L +I+ KY
Sbjct:   79 RLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPEG-LLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKADSSSTEEMQRWMVAMSPGTDVEEIAGADHAVMNSKPRELCDILIKIANKY 267          
BLAST of CN189383 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 5.181e-33
Identity = 76/190 (40.00%), Postives = 113/190 (59.47%), Query Frame = -2
Query:   84 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLKY 647
            +++LVGHS GG+++ALA ++FP K++ AVFV A MP          E++  +   E    +D +    + S  S +++  G  FL  K YQ  P EDL LAKMLVRPG+ F+D+  +  ES  ++  YGSVK+VY++ + D    ++ Q WM+   P  +V EI G DH  M S P++LCD L +I+ KY
Sbjct:   79 RLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPEG-LLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKADSSSTEEMQRWMVAMSPGTDVEEIAGADHAVMNSKPRELCDILIKIANKY 267          
BLAST of CN189383 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 5.362e-30
Identity = 66/190 (34.74%), Postives = 113/190 (59.47%), Query Frame = -2
Query:   81 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQ-FSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLKYA 647
            KVI+VG S  G+ +A+AAD++  KI+  VF  + +PDT H PS+ +E+  E        W DT+ F+  + +  +  +M  G   L   ++  C   + ELAKM++R GS+F + L++  KF+++GYGS+K+VY+  ++D      FQ W I NY  ++V +++GGDH   L+  +++   L +++  YA
Sbjct:   73 KVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLLESF----PDWRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRKGSLFQNVLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDHKLQLTKTEEVAHILQEVADAYA 258          
BLAST of CN189383 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.516e-16
Identity = 55/186 (29.57%), Postives = 93/186 (50.00%), Query Frame = -2
Query:   93 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQF-SQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQIS 647
            KVILVGHS GG +++ A ++FP KIS A+FV A M     RP    + +SE++G  +    ++QF    +  +      +F +  +    +   P +D+ LA + +RP  + +  + ++   + E YG  +R Y+   +D  L    Q  +++      V +IKG DH    S PQ L   L +I+
Sbjct:  165 KVILVGHSTGGASISYALERFPEKISKAIFVCATMVSDGQRP---FDVFSEELGSAERFMKESQFLIYGNGKDKPPTGFMFEKPHMKGLYFNQSPNKDIALAMISMRP--VPLGPMMEKVSLTAERYGKGRRFYVQTLDDRALSPDVQEKLVRENSPEGVFKIKGSDHCPFFSKPQSLHKILLEIA 345          
BLAST of CN189383 vs. ExPASy Swiss-Prot
Match: PPD_ARATH (Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 53/181 (29.28%), Postives = 85/181 (46.96%), Query Frame = -2
Query:  117 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSM----FIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKL 647
            KVILVGHS+GG ++  A  KF  KIS+A+++ A M      PS      S     E+D W   +++  + ++     +L   EF+    Y   P ED+ L+  L+RP  M     +D L    +        V RVY+   +D       Q  +++N+P +++  ++  DH A  S P  L
Sbjct:   80 KVILVGHSIGGGSVTEALCKFTDKISMAIYLAASMVQPGSIPS---PHLSNIHVGEEDIW---EYTYGEGTDKPPTGVLMKPEFIRHYYYSQSPLEDVTLSSKLLRPAPMRAFQDLDKLPPNPEAE-----KVPRVYIKTAKDNLFDSVRQDLLVENWPPSQLYVLEDSDHSAFFSVPTTL 249          
The following BLAST results are available for this feature:
BLAST of CN189383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PNAE_RAUSE8.234e-4749.19Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
PIR7A_ORYSJ8.540e-3641.05Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI8.540e-3641.05Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
HNL_HEVBR2.326e-3338.30Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
PIR7B_ORYSJ5.181e-3340.00Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI5.181e-3340.00Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
HNL_MANES5.362e-3034.74Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
Y1399_ARATH7.516e-1629.57Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
PPD_ARATH2.502e-1129.28Probable pheophorbidase OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001M10_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001M10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189383 ID=CN189383; Name=CN189383; organism=Citrus sinensis; type=EST; length=648bp
TTTTTTTTTTTTTTTTTAACGGGAAAAAGCACCTTGATTTATTTATTTTG
TTTGAAAAGCATCTGACAAGATTAATTTTATGCATACTTAAGAGAAATCT
GAGACAGACAATCGCAAAGTTTCTGTGGGTCGGAAAGCATTGCCATGTGA
TCACCGCCCTTGATCTCCATCACTTCATTAACGGGATAGTTTTGGATCAT
CCAGTGCTGAAATTGCTTAGGGAGACCAATATCCTCTTCGCATACAAGAT
AAACTCGCTTAACAGATCCGTATCCTTCATCGCTGAACTTACTTTCCTTC
GATAAGTTGTCTATAAACATTGATCCTGGCCTCACCAACATCTTGGCCAG
CTCCAGATCCTCAGGAGGACAAAGCTGATAGATCTTGATAGTCAAGAACT
CGCGGCCGAAAAGCATGGAAATGTGAGATGGATTTGACGCGTCACATTGT
GAAAATTGAGTGTCCAACCAGCTGTCGTCCTCTTTTCCCATCTTCTCAGA
ATACTGCTCCAAAACAAAAGATGGGCGGTGTGTGGTGTCAGGCATGAATG
CAGTTACGAAAACAGCCACGGAGATTTTGTGGGGGAATTTGTCGGCGGCA
AGGGCCAAAGTGACGCCCCCAAGACTGTGTCCGACAAGTATGACCTTT
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