DR908683

Overview
NameDR908683
Unique NameDR908683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908683 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 6.075e-67
Identity = 122/138 (88.41%), Postives = 132/138 (95.65%), Query Frame = 2
Query:   62 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 475
            ANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+GEPT++YEDFAASLP  ECRYAVYD+DFVTAENCQKSRIFFIAW PDTARVRSKMIYASSKDRFKRELDGIQVELQA DP+EMGLDV + RAN
Sbjct:    2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139          
BLAST of DR908683 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.036e-66
Identity = 122/141 (86.52%), Postives = 134/141 (95.04%), Query Frame = 2
Query:   62 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN*IK 484
            ANAASGMAVHDDCKLKFLELKAKRTYRFI++KIEEKQK+V+VEKLGEPT++YEDF A LPA+ECRYAVYD+DF+T EN QKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDP+EMGLDVF+ RA  I+
Sbjct:    2 ANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSRAGGIE 142          
BLAST of DR908683 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 1.496e-65
Identity = 120/138 (86.96%), Postives = 130/138 (94.20%), Query Frame = 2
Query:   62 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 475
            ANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQVIVEK+GEP  TYEDFAASLPA+ECRYA+YD+DFVTAENCQKS+IFFIAW PD A+VRSKMIYASSKDRFKRELDGIQVELQATDP+EM LDV K R N
Sbjct:    2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139          
BLAST of DR908683 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.496e-65
Identity = 118/138 (85.51%), Postives = 132/138 (95.65%), Query Frame = 2
Query:   62 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 475
            ANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+G+P QTYE+FAA LPA+ECRYA+YD+DFVTAENCQKS+IFFIAW PD A+VRSKMIYASSKDRFKRELDGIQVELQATDP+EM LDVF+ RAN
Sbjct:    2 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139          
BLAST of DR908683 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.401e-63
Identity = 117/138 (84.78%), Postives = 130/138 (94.20%), Query Frame = 2
Query:   62 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 475
            ANAASGMAVHDDCKLKF+ELKAKRT+R IV+KIE+KQ  VIVEKLGEP Q+Y+DFAASLPA++CRY +YD+DFVTAENCQKS+IFFIAWSPDTA+VR KMIYASSKDRFKRELDGIQVELQATDP+EMGLDVFK R N
Sbjct:    2 ANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQ--VIVEKLGEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137          
BLAST of DR908683 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 3.120e-63
Identity = 114/138 (82.61%), Postives = 129/138 (93.48%), Query Frame = 2
Query:   62 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 475
            ANAASGMAV D+CKLKFLELKAKRTYRFI++KI+EK+K V+VEK+GEP   Y+DFAASLPA ECRYA++DYDFVT ENCQKS+IFFIAWSPDT+RVRSKMIYASSKDRFKRELDGIQVELQATDP+E+GLDV + RAN
Sbjct:    2 ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139          
BLAST of DR908683 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 1.549e-62
Identity = 114/138 (82.61%), Postives = 129/138 (93.48%), Query Frame = 2
Query:   62 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 475
            ANAASGMAVHDDCKLKF+ELK KRT+RFI++KIEE QKQVIVEK+GEP QT+ED AASLPA+ECRYA++D+DFV++E   +SRIFF+AWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDP+EM LDVFK RAN
Sbjct:    2 ANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKSRAN 139          
BLAST of DR908683 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.893e-60
Identity = 109/138 (78.99%), Postives = 123/138 (89.13%), Query Frame = 2
Query:   62 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 475
            AN+ASGM V D+CKLKFLELKAKR YRFIVFKI+EK +QV+++KLG P +TYEDF  S+P +ECRYAVYDYDF T ENCQKS+IFFIAWSPDT+RVRSKM+YASSKDRFKRELDGIQVELQATDPSEM LD+ K R N
Sbjct:    2 ANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139          
BLAST of DR908683 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 4.663e-59
Identity = 105/138 (76.09%), Postives = 125/138 (90.58%), Query Frame = 2
Query:   62 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 475
            AN+ASGM V+D+CK+KFLELKAKRTYRFIVFKI+EK +QV +EKLG P +TY+DF +S+P +ECRYAVYD+DF T +NCQKS+IFFIAWSPDT+RVRSKM+YASSKDRFKRE++GIQVELQATDPSEM LD+ K R N
Sbjct:    2 ANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGRLN 139          
BLAST of DR908683 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.022e-58
Identity = 104/137 (75.91%), Postives = 127/137 (92.70%), Query Frame = 2
Query:   62 ANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 472
            +N+ASGMAV D+CKLKFLELKAKR++RFIVFKI EK +QV+V++LG+P ++Y+DF A LPA+ECRYAV+D+DFVT ENCQKS+IFFI+W+PDT+RVRSKM+YASSKDRFKRELDGIQVELQATDPSEM +D+ K RA
Sbjct:    2 SNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRA 138          
The following BLAST results are available for this feature:
BLAST of DR908683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
ADF1_PETHY6.075e-6788.41Actin-depolymerizing factor 1 OS=Petunia hybrida G... [more]
ADF2_PETHY1.036e-6686.52Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF4_ARATH1.496e-6586.96Actin-depolymerizing factor 4 OS=Arabidopsis thali... [more]
ADF1_ARATH1.496e-6585.51Actin-depolymerizing factor 1 OS=Arabidopsis thali... [more]
ADF2_ARATH1.401e-6384.78Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]
ADF7_ORYSJ3.120e-6382.61Actin-depolymerizing factor 7 OS=Oryza sativa subs... [more]
ADF3_ARATH1.549e-6282.61Actin-depolymerizing factor 3 OS=Arabidopsis thali... [more]
ADF10_ARATH1.893e-6078.99Actin-depolymerizing factor 10 OS=Arabidopsis thal... [more]
ADF8_ARATH4.663e-5976.09Actin-depolymerizing factor 8 OS=Arabidopsis thali... [more]
ADF1_ORYSJ3.022e-5875.91Actin-depolymerizing factor 1 OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16811 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-21_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908683 ID=DR908683; Name=DR908683; organism=Citrus sinensis; type=EST; length=595bp
TGATAATGAGCTGAATGCCTTTGACTTATTTATGAATGAAGATGGAATCA
CAATGAGCAAGGCTAATGCTGCTTCTGGGATGGCTGTACATGATGACTGT
AAGCTAAAGTTCTTGGAGTTGAAAGCCAAGAGAACCTACCGCTTCATAGT
ATTTAAGATTGAGGAGAAGCAGAAGCAGGTCATTGTGGAAAAACTTGGTG
AGCCAACTCAAACCTATGAAGATTTTGCTGCCAGCCTTCCTGCTGAGGAG
TGCCGATATGCTGTGTATGATTATGATTTTGTTACCGCAGAGAACTGCCA
AAAAAGCAGGATTTTCTTCATTGCATGGTCTCCCGACACTGCAAGAGTAA
GAAGCAAGATGATTTATGCAAGCTCCAAGGACAGGTTCAAGAGAGAGCTA
GATGGCATTCAAGTGGAGCTGCAGGCAACTGATCCATCTGAGATGGGTCT
TGACGTATTTAAAGACCGTGCCAACTAAATAAAGGCTCCTGATCTCAGCA
ATTGAGATTGTTTTTATCTTTTGTGCTTTACCTAAAGGTGAAATGTTAAT
AGTTTGTGGCGGCAGCTTGAATCTAACTGAATTATGATATTGGGT
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