CN189339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_CYAP8 (Protein translocase subunit secA OS=Cyanothece sp. (strain PCC 8801) GN=secA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.023e-16 Identity = 54/131 (41.22%), Postives = 70/131 (53.44%), Query Frame = -3 Query: 139 KAEGKSWT-----------YQEAKSFFSESVEMS------QSMNLKELQKLIDKQSAMYPLGPTVA----LTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 468 K +GK+W+ QE + E+V+ + QS+ E ++ I S P +V + Y ++ K E E EV LGGLHVIGT HESRRIDNQLRGRAGRQGDPGST+F + Sbjct: 554 KKKGKNWSPSDADIFPTKMSQETEEILKEAVKFAVEQYGQQSLTELEAEEKIAIASENAPTDDSVVEKLRVVYKAIRKTYETVTDQEHDEVVELGGLHVIGTERHESRRIDNQLRGRAGRQGDPGSTKFFL 684
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_PELPD (Protein translocase subunit secA OS=Pelobacter propionicus (strain DSM 2379) GN=secA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.451e-16 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -3 Query: 145 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 315 Y ++LK+ + C+ E EV RLGGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF Sbjct: 538 YQAILKNYKTVCAAEHDEVVRLGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRF 594
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_SYNY3 (Protein translocase subunit secA OS=Synechocystis sp. (strain PCC 6803) GN=secA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.507e-16 Identity = 55/131 (41.98%), Postives = 71/131 (54.20%), Query Frame = -3 Query: 139 GKAEGKSWTY----------QEAKSFFSESVEMS-QSMNLKELQKLI--DKQSAMYPLGPT-------VALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 471 GK + K+W QE + ++V+ + L+ L +L DK + GPT + Y + ++ EV S E EV LGGLHVIGT HESRR+DNQLRGRAGRQGDPGSTRF + Sbjct: 551 GKKKVKTWQVSPDIYPTTISQETEDLLKKAVKFAVDQYGLQSLTELEAEDKLAIASEKGPTDDPVILKLREVYNQIRREYEVLTSAEHKEVVELGGLHVIGTERHESRRVDNQLRGRAGRQGDPGSTRFFL 681
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_GEOUR (Protein translocase subunit secA OS=Geobacter uraniireducens (strain Rf4) GN=secA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.311e-15 Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = -3 Query: 145 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 315 Y VL + C+NE EV +LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF Sbjct: 538 YERVLAQFKEQCANEHDEVVKLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRF 594
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_SYNP6 (Protein translocase subunit secA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=secA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15 Identity = 40/59 (67.80%), Postives = 44/59 (74.58%), Query Frame = -3 Query: 139 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 315 Y V K+ E E +EV LGGLHVIGT HESRR+DNQLRGRAGRQGDPGSTRF + Sbjct: 635 YQQVRKEYEAVTKQEQAEVVELGGLHVIGTERHESRRVDNQLRGRAGRQGDPGSTRFFL 693
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_SYNE7 (Protein translocase subunit secA OS=Synechococcus elongatus (strain PCC 7942) GN=secA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15 Identity = 40/59 (67.80%), Postives = 44/59 (74.58%), Query Frame = -3 Query: 139 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 315 Y V K+ E E +EV LGGLHVIGT HESRR+DNQLRGRAGRQGDPGSTRF + Sbjct: 635 YQQVRKEYEAVTKQEQAEVVELGGLHVIGTERHESRRVDNQLRGRAGRQGDPGSTRFFL 693
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_CYAP7 (Protein translocase subunit secA OS=Cyanothece sp. (strain PCC 7424) GN=secA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.713e-15 Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = -3 Query: 139 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 315 Y + + E+ S E +EV LGGLHV+GT HESRRIDNQLRGRAGRQGDPGSTRF + Sbjct: 626 YKKIRAEYEIFTSKEHNEVVELGGLHVMGTERHESRRIDNQLRGRAGRQGDPGSTRFFL 684
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_GLOVI (Protein translocase subunit secA OS=Gloeobacter violaceus GN=secA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.237e-15 Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = -3 Query: 139 TYQEAKSFFSESVEM--SQSMNLKELQKLIDKQSAMYPLGPTVAL----TYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 447 T Q+ K+ +V M + S ++++LI S P V Y ++ K+ +V E EV +LGGLHVIGT HE+RR+DNQLRGR+GRQGDPGSTRF + Sbjct: 583 TKQQLKAAVDYAVAMLGADSQPALQVEELIAVASEKGPTDDPVIQHLREIYRAIYKEYQVVTDREHDEVVKLGGLHVIGTERHEARRVDNQLRGRSGRQGDPGSTRFFL 691
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_GRATL (Protein translocase subunit secA OS=Gracilaria tenuistipitata var. liui GN=secA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.921e-15 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = -3 Query: 139 QSMNLKELQ----KLIDKQSAMYPLGPTVALTYLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 399 ++++LK++Q K+I + Y + YL +L + + C E EV +LGGL+VIGT HESRRIDNQLRGRAGRQGD G++RF + Sbjct: 545 KNIDLKKIQYYIEKIIKNEHTKYSEEEKLQKLYLKILSEYKNICYQEKQEVLKLGGLYVIGTERHESRRIDNQLRGRAGRQGDIGASRFFL 635
BLAST of CN189339 vs. ExPASy Swiss-Prot
Match: SECA_GEOMG (Protein translocase subunit secA OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=secA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.816e-15 Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = -3 Query: 145 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRF 315 Y ++L + C+ E EV +LGGLH++GT HESRRIDNQLRGR+GRQGDPGS+RF Sbjct: 538 YAAILAKYKAECAAEHDEVVKLGGLHILGTERHESRRIDNQLRGRSGRQGDPGSSRF 594 The following BLAST results are available for this feature:
BLAST of CN189339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189339 ID=CN189339; Name=CN189339; organism=Citrus sinensis; type=EST; length=572bpback to top |