DR908666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908666 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.746e-48 Identity = 103/170 (60.59%), Postives = 128/170 (75.29%), Query Frame = 1 Query: 52 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQXXXXXXXXXXXXXXXXXNKLRS*K-KGKILIEENTKLREQ 558 MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAL+IFSPR KLYEFSS SI TIERYQ++ K+IG N K D+SQ A++ETS + K+E LE++KRKLLG+G++ C+I+ELQQLENQ ++ K + + L++EN L+E+ Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERYQRRIKEIGNNHK-RNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
BLAST of DR908666 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 4.141e-47 Identity = 106/177 (59.89%), Postives = 127/177 (71.75%), Query Frame = 1 Query: 52 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF-SSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQXXXXXXXXXXXXXXXXXNKLRS*K-KGKILIEENTKLREQCGMPPR 576 MVRGKT+MKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEF SS SI KT+ERYQK+ +D+G N K D+SQ +K+ET + K+E LE++ RK++G+GL+ +I+ELQQLENQ + K K + LI EN L E+C M R Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHK-RNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCEMQGR 176
BLAST of DR908666 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.684e-46 Identity = 100/172 (58.14%), Postives = 121/172 (70.35%), Query Frame = 1 Query: 52 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQXXXXXXXXXXXXXXXXXNKLRS*K-KGKILIEENTKLREQCG 564 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEV+LIIFSP+GKLYEF+S ++ TI+RY + TKD + E++ QH K E +NMM K+E LE +KRKLLG+G+ C+I+ELQQ+E Q ++ K K K L EN KL E+ G Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWG 172
BLAST of DR908666 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.524e-41 Identity = 100/181 (55.25%), Postives = 119/181 (65.75%), Query Frame = 1 Query: 52 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLE---NQXXXXXXXXXXXXXXXXXNKLRS*KKGKILIEENTKLREQC-GMPPRQA 582 MVRGKTQMKRIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVALI+FSPRGKLYEF+S S KTIERY+ TK+ I +K V+ + K + + KLE LE KRKLLG+ L+ C+I+EL LE + KLR +K L ++N +LRE+C PP A Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKE-NIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLR--EKEMKLRKDNEELREKCKNQPPLSA 178
BLAST of DR908666 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 3.178e-39 Identity = 82/129 (63.57%), Postives = 106/129 (82.17%), Query Frame = 1 Query: 52 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSC-SINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLE 435 MVRG+T++KRIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVALI+FSPRG+LYEF+S S+ KTI+RY+ TKD +N+K ++ Q K++T + KLE L+ ++RK+LG+ LE C+I+EL+ LE Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD-HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLE 128
BLAST of DR908666 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.994e-38 Identity = 81/129 (62.79%), Postives = 105/129 (81.40%), Query Frame = 1 Query: 52 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSC-SINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLE 435 MVRG+T++KRIEN TSRQVTFSKRRNGLLKKAFELSVLCDAEVALI+FSPRG+LYEF+S S+ KTI+RY+ TKD +N+K ++ Q K++T + KLE L+ ++RK+LG+ LE +I+EL+ LE Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD-HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLE 128
BLAST of DR908666 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 4.020e-34 Identity = 78/131 (59.54%), Postives = 95/131 (72.52%), Query Frame = 1 Query: 52 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDI-GINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQ 441 M RG+ ++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF S INKT+E+Y + G NS + Q +E S + TKLE L+ ++R +LG+ L P +I ELQQLE Q Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQ 131
BLAST of DR908666 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.206e-32 Identity = 75/169 (44.38%), Postives = 114/169 (67.46%), Query Frame = 1 Query: 52 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQXXXXXXXXXXXXXXXXXNKLRS*KKGKILIE-ENTKLRE 555 M RGK ++KRIEN+T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+++ +I TIERY+K D S + E ++ + ++E++ + +++ ++ + R L+GD L ++ EL+Q+EN+ +++RS K +L+E EN + RE Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENR------------LEKAISRIRSKKHELLLVEIENAQKRE 157
BLAST of DR908666 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.095e-31 Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = 1 Query: 52 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVAKRKLLGDGLEPCTIDELQQLENQ 441 M RG+ ++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF S I KT+ERYQ + ++ + + +Q E S + K E L+ +R LLG+ L P ++ ELQQLE Q Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSE-TQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQ 129
BLAST of DR908666 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.095e-31 Identity = 66/131 (50.38%), Postives = 98/131 (74.81%), Query Frame = 1 Query: 52 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSCSINKTIERYQKKTKDIGINSKIVEDHSQHAKEETSNMMTKLEFLEVA-KRKLLGDGLEPCTIDELQQLENQ 441 M RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+++ S+ T+ERY+K D + + E ++QH ++E+S + ++ L+ A R ++GD + ++ +L+Q+EN+ Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENR 131 The following BLAST results are available for this feature:
BLAST of DR908666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908666 ID=DR908666; Name=DR908666; organism=Citrus sinensis; type=EST; length=598bpback to top |