CN189327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189327 vs. ExPASy Swiss-Prot
Match: IDHP_MEDSA (Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.734e-44 Identity = 82/91 (90.11%), Postives = 87/91 (95.60%), Query Frame = 2 Query: 407 RYNVAIKCATITPDEVRVKEFNLKRMWKSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDAVIQGPGKLKLVF 679 +YNVAIKCATITPDE RVKEF LK MW+SPNGTIRNILNGTVFREPIICKNIPRL+ GWTKPICIGRHAFGDQYRATD+VI+GPGKLKLVF Sbjct: 89 KYNVAIKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPIICKNIPRLIPGWTKPICIGRHAFGDQYRATDSVIKGPGKLKLVF 179 HSP 2 Score: 120.168 bits (300), Expect = 1.248e-26 Identity = 57/69 (82.61%), Postives = 64/69 (92.75%), Query Frame = 1 Query: 10 MEFQKIKVANPIVEMDGDEMTRVIWKLIKDKLINPFLELDIKYFDLGLPNRDATDDQVTIQSAQATLKY 216 M FQKIKVANPIVEMDGDEMTR+IWK IKDKLI PF+ELDIKYFDLGLP RD T+D+VT++SA+ATLKY Sbjct: 22 MGFQKIKVANPIVEMDGDEMTRIIWKYIKDKLIFPFVELDIKYFDLGLPYRDETNDKVTVESAEATLKY 90
BLAST of CN189327 vs. ExPASy Swiss-Prot
Match: IDHC_TOBAC (Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.264e-44 Identity = 83/91 (91.21%), Postives = 86/91 (94.51%), Query Frame = 2 Query: 407 RYNVAIKCATITPDEVRVKEFNLKRMWKSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDAVIQGPGKLKLVF 679 +YNVAIKCATITPDE RVKEFNLK MW+SPNGTIRNILNGTVFREPI+CKNIPRLV GWTKPICIGRHAFGDQYRATD VIQG GKLKLVF Sbjct: 68 KYNVAIKCATITPDEARVKEFNLKSMWRSPNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIQGAGKLKLVF 158 HSP 2 Score: 120.553 bits (301), Expect = 9.558e-27 Identity = 58/69 (84.06%), Postives = 63/69 (91.30%), Query Frame = 1 Query: 10 MEFQKIKVANPIVEMDGDEMTRVIWKLIKDKLINPFLELDIKYFDLGLPNRDATDDQVTIQSAQATLKY 216 M F KIKV NPIVEMDGDEMTRVIWK IKDKLI PFLELDIKYFDLGLP+RDATDD+VT++SA+AT KY Sbjct: 1 MTFDKIKVENPIVEMDGDEMTRVIWKSIKDKLICPFLELDIKYFDLGLPHRDATDDKVTVESAEATQKY 69
BLAST of CN189327 vs. ExPASy Swiss-Prot
Match: IDHC_SOLTU (Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum GN=ICDH-1 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.589e-44 Identity = 82/91 (90.11%), Postives = 86/91 (94.51%), Query Frame = 2 Query: 407 RYNVAIKCATITPDEVRVKEFNLKRMWKSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDAVIQGPGKLKLVF 679 +YNVAIKCATITPDE RVKEFNLK MW+SPNGTIRNILNGTVFREPI+CKNIPRLV GWTKPICIGRHAFGDQYRATD VI+G GKLKLVF Sbjct: 68 KYNVAIKCATITPDEARVKEFNLKSMWRSPNGTIRNILNGTVFREPIMCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIKGAGKLKLVF 158 HSP 2 Score: 117.857 bits (294), Expect = 6.195e-26 Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 1 Query: 10 MEFQKIKVANPIVEMDGDEMTRVIWKLIKDKLINPFLELDIKYFDLGLPNRDATDDQVTIQSAQATLKY 216 M FQKI V NPIVEMDGDEMTRVIWK IKDKLI PFLELDIKYF LGLP+RDATDD+VT++SA+AT KY Sbjct: 1 MAFQKITVQNPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFSLGLPHRDATDDKVTVESAEATQKY 69
BLAST of CN189327 vs. ExPASy Swiss-Prot
Match: IDHC_SOYBN (Isocitrate dehydrogenase [NADP] OS=Glycine max GN=IDH1 PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 9.514e-43 Identity = 81/91 (89.01%), Postives = 84/91 (92.31%), Query Frame = 2 Query: 407 RYNVAIKCATITPDEVRVKEFNLKRMWKSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDAVIQGPGKLKLVF 679 +YNVAIKCATITPDE RVKEF LK MWKSPNGTIRNILNGTVFREPI+CKNIPRLV GWTK ICIGRHAFGDQYRATD VI+G GKLKLVF Sbjct: 69 KYNVAIKCATITPDEARVKEFGLKSMWKSPNGTIRNILNGTVFREPILCKNIPRLVPGWTKAICIGRHAFGDQYRATDTVIKGAGKLKLVF 159 HSP 2 Score: 121.324 bits (303), Expect = 5.604e-27 Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 1 Query: 16 FQKIKVANPIVEMDGDEMTRVIWKLIKDKLINPFLELDIKYFDLGLPNRDATDDQVTIQSAQATLKY 216 FQKIKVANPIVEMDGDEMTRVIWK IKDKLI PFLELDIKY+DLGLP RD TDD+VTI+SA+ATLKY Sbjct: 4 FQKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYYDLGLPYRDETDDKVTIESAEATLKY 70
BLAST of CN189327 vs. ExPASy Swiss-Prot
Match: IDHC_PONAB (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Pongo abelii GN=IDH1 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 3.167e-38 Identity = 71/91 (78.02%), Postives = 81/91 (89.01%), Query Frame = 2 Query: 407 RYNVAIKCATITPDEVRVKEFNLKRMWKSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDAVIQGPGKLKLVF 679 +YNV +KCATITPDE RV+EF LK+MWKSPNGTIRNIL GTVFRE IICKNIPRLVSGW KPI IGRHA+GDQYRATD V+ GPGK+++ + Sbjct: 66 KYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITY 156 HSP 2 Score: 82.4185 bits (202), Expect = 2.885e-15 Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 1 Query: 43 IVEMDGDEMTRVIWKLIKDKLINPFLELDIKYFDLGLPNRDATDDQVTIQSAQATLKY 216 +VEM GDEMTR+IW+LIK+KLI P++ELD+ +DLG+ NRDAT+DQVT +A+A KY Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKY 67
BLAST of CN189327 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.167e-38 Identity = 71/91 (78.02%), Postives = 81/91 (89.01%), Query Frame = 2 Query: 407 RYNVAIKCATITPDEVRVKEFNLKRMWKSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDAVIQGPGKLKLVF 679 +YNV +KCATITPDE RV+EF LK+MWKSPNGTIRNIL GTVFRE IICKNIPRLV+GW KPI IGRHA+GDQYRATD V+ GPGK+++ F Sbjct: 66 KYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITF 156 HSP 2 Score: 82.4185 bits (202), Expect = 2.885e-15 Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 1 Query: 43 IVEMDGDEMTRVIWKLIKDKLINPFLELDIKYFDLGLPNRDATDDQVTIQSAQATLKY 216 +VEM GDEMTR+IW+LIK+KLI P++ELD+ +DLG+ NRDAT+DQVT +A+A KY Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKY 67
BLAST of CN189327 vs. ExPASy Swiss-Prot
Match: IDHC_SHEEP (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Ovis aries GN=IDH1 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.136e-38 Identity = 71/91 (78.02%), Postives = 81/91 (89.01%), Query Frame = 2 Query: 407 RYNVAIKCATITPDEVRVKEFNLKRMWKSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDAVIQGPGKLKLVF 679 +YNV +KCATITPDE RV+EF LK+MWKSPNGTIRNIL GTVFRE IICKNIPRLVSGW KPI IGRHA+GDQYRATD V+ GPGK+++ + Sbjct: 66 KYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEICY 156 HSP 2 Score: 78.9518 bits (193), Expect = 3.189e-14 Identity = 35/58 (60.34%), Postives = 48/58 (82.76%), Query Frame = 1 Query: 43 IVEMDGDEMTRVIWKLIKDKLINPFLELDIKYFDLGLPNRDATDDQVTIQSAQATLKY 216 +VEM GDEMTR+IW+LIK+KLI P+++LD+ +DL + NRDAT+DQVT +A+A KY Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVDLDLHSYDLSIENRDATNDQVTKDAAEAIKKY 67
BLAST of CN189327 vs. ExPASy Swiss-Prot
Match: IDHC_BOVIN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Bos taurus GN=IDH1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.402e-38 Identity = 71/91 (78.02%), Postives = 81/91 (89.01%), Query Frame = 2 Query: 407 RYNVAIKCATITPDEVRVKEFNLKRMWKSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDAVIQGPGKLKLVF 679 +YNV +KCATITPDE RV+EF LK+MWKSPNGTIRNIL GTVFRE IICKNIPRLVSGW KPI IGRHA+GDQYRATD V+ GPGK+++ + Sbjct: 66 KYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEISY 156 HSP 2 Score: 83.1889 bits (204), Expect = 1.691e-15 Identity = 40/66 (60.61%), Postives = 53/66 (80.30%), Query Frame = 1 Query: 19 QKIKVANPIVEMDGDEMTRVIWKLIKDKLINPFLELDIKYFDLGLPNRDATDDQVTIQSAQATLKY 216 QKI+ +VEM GDEMTR+IW+LIK+KLI P++ELD+ +DLG+ NRDAT+DQVT +A+A KY Sbjct: 3 QKIQ-GGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKY 67
BLAST of CN189327 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.056e-38 Identity = 70/91 (76.92%), Postives = 81/91 (89.01%), Query Frame = 2 Query: 407 RYNVAIKCATITPDEVRVKEFNLKRMWKSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDAVIQGPGKLKLVF 679 +YNV +KCATITPDE RV+EF LK+MWKSPNGTIRNIL GTVFRE IICKNIPRLV+GW KPI IGRHA+GDQYRATD V+ GPGK+++ + Sbjct: 66 KYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITY 156 HSP 2 Score: 82.4185 bits (202), Expect = 2.885e-15 Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 1 Query: 43 IVEMDGDEMTRVIWKLIKDKLINPFLELDIKYFDLGLPNRDATDDQVTIQSAQATLKY 216 +VEM GDEMTR+IW+LIK+KLI P++ELD+ +DLG+ NRDAT+DQVT +A+A KY Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKY 67
BLAST of CN189327 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.056e-38 Identity = 70/91 (76.92%), Postives = 81/91 (89.01%), Query Frame = 2 Query: 407 RYNVAIKCATITPDEVRVKEFNLKRMWKSPNGTIRNILNGTVFREPIICKNIPRLVSGWTKPICIGRHAFGDQYRATDAVIQGPGKLKLVF 679 +YNV +KCATITPDE RV+EF LK+MWKSPNGTIRNIL GTVFRE IICKNIPRLV+GW KPI IGRHA+GDQYRATD V+ GPGK+++ + Sbjct: 66 KYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVVPGPGKVEITY 156 HSP 2 Score: 82.4185 bits (202), Expect = 2.885e-15 Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 1 Query: 43 IVEMDGDEMTRVIWKLIKDKLINPFLELDIKYFDLGLPNRDATDDQVTIQSAQATLKY 216 +VEM GDEMTR+IW+LIK+KLI P++ELD+ +DLG+ NRDAT+DQVT +A+A KY Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKY 67 The following BLAST results are available for this feature:
BLAST of CN189327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189327 ID=CN189327; Name=CN189327; organism=Citrus sinensis; type=EST; length=755bpback to top |