DR908654

Overview
NameDR908654
Unique NameDR908654
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR908654_ssr167 microsatellite DR908654_ssr167:167..178. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10852 contig Csv1_Contig10852:18..618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908654 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.036e-29
Identity = 74/197 (37.56%), Postives = 111/197 (56.35%), Query Frame = 2
Query:   32 TAISFLVLTFATKP-LVGLAD----PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFST--ETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCMDVG--VSNDHARRLALTN 592
            TA+  L+  F +K    G+A+    P++D +G++++    YY++S+I               + CP  VVQ  SD + GT + FS  D K  ++    D+N+ F    +  C+  TVWR+D+YD S GKW++TT GV+G PG  TL +WFK E+ G     YK   CPSVC+SC +LC D+G    +D   RLAL++
Sbjct:    5 TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG--VLGYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSD 199          
BLAST of DR908654 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 1.655e-27
Identity = 74/200 (37.00%), Postives = 105/200 (52.50%), Query Frame = 2
Query:   26 FVTAISFLVLTFATKPLVGLAD----PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNE--LCPLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFSTETRCN--EPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCMDVGVSNDH--ARRLALTN 592
            FV+A+    L  A  PL+  AD    P++D++G K+    +YY+V  +              N   +CP  VVQ   + +    L F   + K  ++    DLN+ FS    C     TVWR+D YD S G++F+T GGV+GNPG +T+ +WFK E   G    YK+V CP+VC SC   C DVG+  D    RRLAL++
Sbjct:   13 FVSAL----LAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGS-GFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of DR908654 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.006e-16
Identity = 62/172 (36.05%), Postives = 88/172 (51.16%), Query Frame = 2
Query:   92 PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNEL-CPLDVVQLSSDSERGTRLRFSMYD--KTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCMDVGVSND--HARRLALTN 592
            P+VD++G  V    DY++VSAI              N+  CPL VVQ   D+  G  + FS     K +I+ E VDLNV+F+    CNE T W+VD + P    W +T GG +G  G ++  + FK ++  G   +YK   CPS   + +  C +V +  D    RRL LTN
Sbjct:    5 PIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDN--GEPIIFSAIKNVKDNIVFESVDLNVKFNITINCNETTAWKVDRF-PGVIGWTVTLGGEKGYHGFESTHSMFKIKK-AGLPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTN 172          
BLAST of DR908654 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.740e-14
Identity = 47/168 (27.98%), Postives = 81/168 (48.21%), Query Frame = 2
Query:   86 ADPLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMYDKT-SIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCMDVGVSNDHARRLAL 586
            A+ + D+ G  V    +YY+VSAI                +CP+ ++Q  SD + G  +RFS  +++   I  D +L + F  +  C E + W +       G+  +  GG E +P  + ++ +FK E++G     YK+V CP   +S    C D+G++ +  R L L
Sbjct:    3 AEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVEKPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLGS--LAYKLVFCP---KSSSGSCSDIGINYEGRRSLVL 162          
BLAST of DR908654 vs. ExPASy Swiss-Prot
Match: SPI2_SOLTU (Serine protease inhibitor 2 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.317e-11
Identity = 50/177 (28.25%), Postives = 78/177 (44.07%), Query Frame = 2
Query:   86 ADPLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPL--DVVQLSSD-SERGTRLRF----SMYDKTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCMDVGVSNDHA-RRLALTN 592
            A P++DV G ++++   Y ++S                N   P    + + +SD    GT +RF    S + +    NE +++    ST   C   T+W+V  YD S G   + TGG  G    Q   +WFK   +   +  Y +++CP    S    C  VGV + +  RRLAL N
Sbjct:    5 ATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKLCVSYTIWKVGDYDASLGTMLLETGGTIG----QADSSWFKI--VKSSQLGYNLLYCPVTSSSDDQFCSKVGVVHQNGKRRLALVN 175          
The following BLAST results are available for this feature:
BLAST of DR908654 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ASP_THECC1.036e-2937.5621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.655e-2737.00Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA1.006e-1636.05Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE2.740e-1427.98Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
SPI2_SOLTU6.317e-1128.25Serine protease inhibitor 2 OS=Solanum tuberosum P... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16782 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-49_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908654 ID=DR908654; Name=DR908654; organism=Citrus sinensis; type=EST; length=601bp
GAAAGATAACAAAATGAGTACTCCTTTTGTAACTGCAATCTCCTTCCTTG
TCCTTACCTTTGCCACAAAACCGCTTGTGGGACTCGCTGATCCTTTGGTT
GATGTCAATGGCAACAAGGTCGAAGCATCCCGAGACTACTATTTGGTCTC
AGCAATTCGAGGAGCAGGCGGCGGCGGCCTCACCCTCTTCAGGGGCAGAA
ACGAACTCTGCCCACTTGATGTTGTCCAACTAAGTTCCGACTCAGAAAGA
GGAACCCGTTTAAGATTCTCAATGTATGATAAAACTAGTATTATCAATGA
AGATGTGGATCTGAACGTGAGATTCTCGACAGAGACTCGCTGCAACGAAC
CAACAGTATGGAGAGTCGACAGCTATGATCCATCGAGAGGAAAATGGTTT
ATAACAACTGGTGGTGTTGAAGGAAACCCTGGAGCTCAAACTTTGAAAAA
CTGGTTTAAGTTTGAGAGAATTGGAGGAGATCGAGCTACGTACAAGATTG
TTCACTGTCCTTCCGTTTGCGAATCCTGTGTATCTTTATGCATGGATGTT
GGGGTTTCTAACGATCATGCTCGACGTTTGGCTCTCACTAACGGGCGCGC
G
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