EY679056

Overview
NameEY679056
Unique NameEY679056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length928
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.800e-69
Identity = 127/174 (72.99%), Postives = 143/174 (82.18%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPS-LISDCGQLA 614
            MPNP+VFFDM+VGGQPAGRIVMELFAD TPRTAENFRALCTGEKG G+SGKPLHYK SSFHRVIPGFMCQ            ESIYG+KFADENF+KKHTGPGILSMANAGP TNGSQFF+C AKTEWLDGKHVVFGQVV+GM   +  ++ G  + +G T+   ++ DCGQL+
Sbjct:    1 MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVG--SSSGRTAKKVVVEDCGQLS 172          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.370e-68
Identity = 125/172 (72.67%), Postives = 140/172 (81.40%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQL 611
            M NPKVFFD+T+GG PAGR+VMELFAD TP+TAENFRALCTGEKGVGK GKPLHYKGS+FHRVIPGFMCQ            ESIYG+KF DENFVKKHTGPGILSMANAGPGTNGSQFF+C AKTEWL+GKHVVFGQVV+GM   +   E+ G +    + P +I+DCGQL
Sbjct:    1 MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIK-KAEAVGSSSGRCSKPVVIADCGQL 171          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 2.218e-66
Identity = 122/174 (70.11%), Postives = 140/174 (80.46%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTS-PSLISDCGQLA 614
            M NPKVFFDM + G PAGRIVMEL+AD TPRTAENFRALCTGEKGVG+SGKPLHYKGS+FHRVIP FMCQ            ESIYG+KFADENF+K+HTGPGILSMANAG GTNGSQFF+C  KTEWLDGKHVVFG+V++GM   +  ++ G  + +G TS P  I+DCGQL+
Sbjct:    1 MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVG--SGSGKTSRPVTIADCGQLS 172          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.542e-64
Identity = 119/172 (69.19%), Postives = 137/172 (79.65%), Query Frame = 3
Query:  102 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTS-PSLISDCGQLA 614
            NPKV+FDMTVGG+ AGRIVMEL+AD TP TAENFRALCTGE+G+GK GKPLHYKGSSFHRVIP FMCQ            ESIYGSKF DENF+KKHTGPGILSMANAG  TNGSQFF+C  KT WLDGKHVVFGQVV+G+   +  ++ G  + +G TS P +I+DCGQ++
Sbjct:    4 NPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVG--SDSGRTSKPVVIADCGQIS 173          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.890e-64
Identity = 114/171 (66.67%), Postives = 136/171 (79.53%), Query Frame = 3
Query:  102 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQLA 614
            +PKVFFDMT+GG PAG+IVMEL+ D TP+TAENFRALCTGEKGVG+SGKPLH+KGSSFHRVIP FMCQ            ESIYG+KF DENF +KHTGPGILSMANAG  TNGSQFF+C  KT+WLDGKHVVFGQVV+G+   +  ++ G  +   PT P +I+DCG+++
Sbjct:    4 HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGS-SSGKPTKPVVIADCGEIS 173          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.346e-63
Identity = 116/173 (67.05%), Postives = 134/173 (77.46%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLISDCGQLA 614
            M  PKV+FDMT+ GQPAGRIVMEL+ D TPRTAENFRALCTGEKGVG +GKPLH+KGS FHRVIP FMCQ            ESIYGSKF DENF +KHTGPGILSMANAG  TNGSQFF+C  KT+WLDGKHVVFGQVV+G+   +  ++ G  +   PT P +++DCGQL+
Sbjct:    1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGS-SSGKPTKPVVVADCGQLS 172          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 9.645e-62
Identity = 117/173 (67.63%), Postives = 133/173 (76.88%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSLIS-DCGQL 611
            M NPKV+FDMTVG + AGRIVMEL+AD  P TAENFRALCTGE+G+GKSGKPLHYKGS+FHRVIP FMCQ            ESIYG KF DENFVKKHTGPGILSM NAG  TNGSQFF+C  KT WLDGKHVVFGQVV+GM   +  ++ G  + +G TS  +++ DCGQL
Sbjct:    1 MVNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVG--SDSGRTSKKVVTCDCGQL 171          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.787e-61
Identity = 115/174 (66.09%), Postives = 134/174 (77.01%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSL-ISDCGQLA 614
            M NP+VFFDM++ G P GRI MELFAD TP TAENFRALCTGEKG+GK GKPLH+KGS FHRVIPGFMCQ            ESIYG+KF DENF+KKHTG GILSMAN+GP TNGSQFF+C  KT WLDGKHVVFGQVV+G+   +  ++ G  + +G TS  + I+DCGQL+
Sbjct:    1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVG--SDSGKTSKVVTITDCGQLS 172          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.819e-60
Identity = 112/175 (64.00%), Postives = 131/175 (74.86%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGM---GRPQGHQESGGLAPAGPTSPSLISDCGQL 611
            M  P+VFFD+T+ G+P GRIVMEL+ D+ P+TAENFRALCTGEKGVGKSGKPLH+KGS FHR+IP FM Q            ESIYG KF DENF +KHTGPG+LSMANAGP TNGSQFF+C  KT WLDGKHVVFG+VV+G+    + +G+  S G     P S  LI+DCGQL
Sbjct:    1 MSRPRVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGT----PKSECLIADCGQL 171          
BLAST of EY679056 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.103e-60
Identity = 115/174 (66.09%), Postives = 131/174 (75.29%), Query Frame = 3
Query:   96 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCRAKTEWLDGKHVVFGQVVQGMGRPQGHQESGGLAPAGPTSPSL-ISDCGQLA 614
            M NP+VFFDMTVGG PAGRIVMEL+A+  P+TAENFRALCTGEKGVGKSGKPLHYKGS+FHRVIP FMCQ            ESIYG KF DE FV+K   PG+LSMANAGP TNGSQFF+C   T WLDGKHVVFGQVV+GM   +  ++ G     G TS  + ++DCGQL+
Sbjct:    1 MANPRVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVG--TRNGSTSKVVKVADCGQLS 172          
The following BLAST results are available for this feature:
BLAST of EY679056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CYPH_CATRO2.800e-6972.99Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYPH_SOLLC2.370e-6872.67Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_LUPLU2.218e-6670.11Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CP19A_ARATH3.542e-6469.19Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CP19B_ARATH7.890e-6466.67Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CP18C_ARATH1.346e-6367.05Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CYPH_BRANA9.645e-6267.63Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP18D_ARATH4.787e-6166.09Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
CYP7_CAEEL1.819e-6064.00Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
CYPH_MAIZE3.103e-6066.09Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-F04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679056 ID=EY679056; Name=EY679056; organism=Citrus sinensis; type=EST; length=928bp
GGGCCGGGACCGGGTCCGGATTCCCGGGTCGACCCCGCGTCCGATCAGAA
GTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATGCC
AAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCGGCCGGCA
GGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGAAC
TTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGTCCGGCAAGCC
TCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCATGT
GCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAATC
TACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCC
CGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCAGT
TCTTCGTCTGTAGGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTGTG
TTCGGTCAGGTCGTTCAAGGGATGGGACGTCCTCAAGGCCATCAAGAAAG
TGGGGGTCTTGCTCCGGCCGGACCAACAAGCCCGTCCTTGATCTCTGATT
GCGGTCAATTGGCTTAAATTTGATCAGGATAGTGATTGCCTTCTTCTCGA
GGCCGGCTGGATCGCGATCGGGAAGAAGGAATTATGGTATTCTATAATTA
ATGGGGGGGGGGTCGGGAGAATTTTTTAAATCTTTTAACTATTTTTCTCG
CCTTGTGTAAAAATTAAAAATAACTTATAATCATATTAAATGACTACAAA
TGGGGGGGACCCGACCAAAAGGAATCTAAAATGTTAACTAAATGCGGGGT
TTGTGAAAGTTCAATCGCCATTTCTCAAGAGGTACACAAATATTTCGAAA
TTTTGTGAGGGGCACTTTGTTTTTTATA
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