DR908648

Overview
NameDR908648
Unique NameDR908648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length602
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908648 vs. ExPASy Swiss-Prot
Match: APMAP_RAT (Adipocyte plasma membrane-associated protein OS=Rattus norvegicus GN=Apmap PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20
Identity = 54/172 (31.40%), Postives = 92/172 (53.49%), Query Frame = 2
Query:    2 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFVLKLPISAKTHYLIHIGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFV 514
            GR+L+YD  TK+  VLL  LQFPNG+ LS ++ F +  E ++ R+ + ++ G   G  + F   +PG+PDN+R +  G +WVA    R+     M  +   + F+ ++     +   +      +++ ++ S  G   + L D  G+VV  +SE  E DG L++GS   PF+
Sbjct:  197 GRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETAMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIFKLFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFRSPFI 368          
BLAST of DR908648 vs. ExPASy Swiss-Prot
Match: APMAP_MOUSE (Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20
Identity = 54/172 (31.40%), Postives = 92/172 (53.49%), Query Frame = 2
Query:    2 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFVLKLPISAKTHYLIHIGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFV 514
            GR+L+YD  TK+  VLL  LQFPNG+ LS ++ F +  E ++ R+ + ++ G   G  + F   +PG+PDN+R +  G +WVA    R+     M  +   + F+ ++     +   +      +++ ++ S  G   + L D  G+VV  +SE  E DG L++GS   PF+
Sbjct:  236 GRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETTMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIFKMFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFRSPFI 407          
BLAST of DR908648 vs. ExPASy Swiss-Prot
Match: APMAP_SALSA (Adipocyte plasma membrane-associated protein OS=Salmo salar GN=apmap PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.342e-20
Identity = 54/178 (30.34%), Postives = 92/178 (51.69%), Query Frame = 2
Query:    2 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFVLKLPISAKTHYLIHIGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDLS 532
            GRVL+YD  TK+ TVL+ NL+F NG+ L  D+   +  E ++ R+ +  + G   G ++ F   LPG+PDN+R +  G +WVA+   R      M  +   + ++ KL     +  ++      +++ ++    G  ++   D  G V   +SE  E DG L++GS   P++   DLS
Sbjct:  237 GRVLEYDTETKEVTVLMENLRFANGIQLFPDEESVLVAETTMARIRRVHVSGLNKGGMDTFVDNLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQKPWIKKLIFKLFSQDVLMKFVPRYSLVIELQESGACMRSFHDPHGMVAAYVSEAHEHDGHLYLGSFRSPYLCKLDLS 414          
BLAST of DR908648 vs. ExPASy Swiss-Prot
Match: APMAP_BOVIN (Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20
Identity = 54/172 (31.40%), Postives = 95/172 (55.23%), Query Frame = 2
Query:    2 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFVLKLPISAKTHYLIHIGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFV 514
            GR+L+YD  TK+  VLL +L+FPNG+ LS  + F +  E ++ R+ ++++ G   G  + F   LPG+PDN+R +  G +WV++   R+     M  +   R F+ K+     +   +      +++ ++ S  G  L+ L D +G+VV  +SE  E  G L++GS   P++
Sbjct:  236 GRLLEYDTQTKEVKVLLDHLRFPNGVQLSPAEDFVLVVELAMVRIRRFYVSGLMKGGADVFVENLPGFPDNIRASSSGGYWVSMAAIRANPGFSMLDFLSERPFLKKVIFKLFSQETVMKFVPRYSLVLELSDSGTFLRSLHDPEGQVVTYVSEAHEHSGHLYLGSFRAPYL 407          
BLAST of DR908648 vs. ExPASy Swiss-Prot
Match: APMAP_DANRE (Adipocyte plasma membrane-associated protein OS=Danio rerio GN=apmap PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.404e-18
Identity = 54/178 (30.34%), Postives = 91/178 (51.12%), Query Frame = 2
Query:    2 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAF-AILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFVLKLPISAKTHYLIHIGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDLS 532
            GRVL+YD  TK+  V++ NL+FPNG+ L  D+   +  E ++ R+ +  + G   G ++ F   LPG+PDN+R +  G +WVA+   R      M  +   R ++ KL     +   +      +++ V+   +G  ++   D +G V    SE  E  G L++GS   P++   DLS
Sbjct:  236 GRVLEYDTETKEVNVMMENLRFPNGIQLFPDEESVLVAETTMARIKRVHVSGLNKGGMDTFIENLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQRPWLKKLIFKLFSQDTLLKFVPRYSLVVELQSDGTCVRSFHDPQGLVSAYSSEAHEYSGHLYLGSFRSPYLCKLDLS 413          
BLAST of DR908648 vs. ExPASy Swiss-Prot
Match: APMAP_HUMAN (Adipocyte plasma membrane-associated protein OS=Homo sapiens GN=APMAP PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18
Identity = 52/172 (30.23%), Postives = 89/172 (51.74%), Query Frame = 2
Query:    2 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFVLKLPISAKTHYLIHIGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFV 514
            GR+L+YD  T++  VLL  L+FPNG+ LS  + F +  E ++ R+ + ++ G   G  + F   +PG+PDN+R +  G +WV +   R      M  +   R ++ ++     +   +      +++ ++ S  G   + L D  G V   ISEV E DG L++GS   PF+
Sbjct:  237 GRLLEYDTVTREVKVLLDQLRFPNGVQLSPAEDFVLVAETTMARIRRVYVSGLMKGGADLFVENMPGFPDNIRPSSSGGYWVGMSTIRPNPGFSMLDFLSERPWIKRMIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDGLVATYISEVHEHDGHLYLGSFRSPFL 408          
BLAST of DR908648 vs. ExPASy Swiss-Prot
Match: APMAP_CHICK (Adipocyte plasma membrane-associated protein OS=Gallus gallus GN=APMAP PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18
Identity = 56/181 (30.94%), Postives = 90/181 (49.72%), Query Frame = 2
Query:    2 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFA-ILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALY----PKIRHFVLKLPISAKTHYLIHIGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVAVYDL 529
            GR+L+YD  TK+  VL+  L+FPNG+ LS  + F +  E ++ R+ +Y++ G   G  + F   +PG PDN+R +  G +WVA+   R      M  +    P I+  + KL        L+       ++ V+ S  G   +   D  G  V  +SE  E +G L++GS   PF+   +L
Sbjct:  236 GRLLEYDTVTKEVKVLMVGLRFPNGVQLSPAEDFVLVLETAMARIRRYYVSGLMKGGADMFVENMPGLPDNIRLSSSGGYWVAMPVVRPNPGFSMLDFLSEKPWIKRMIFKLLSQETVTKLL----PKRSLVVELSETGSYRRSFHDPTGLTVPYVSEAHEHNGYLYLGSFRSPFICRLNL 412          
BLAST of DR908648 vs. ExPASy Swiss-Prot
Match: STSY_CATRO (Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.516e-17
Identity = 57/177 (32.20%), Postives = 82/177 (46.33%), Query Frame = 2
Query:    2 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFVLKLPISAKTHYLIHIGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVA--VYD 526
            GR++KYDP+TK+TT+LL+ L  P G  +S D SF V  E    R+ KYWL G K G+ E    +P  P N++ N  G FWV+         H                            GR+ +  +K+   G ILQV+        +   +++E DG L++GS+    V   VYD
Sbjct:  193 GRLMKYDPSTKETTLLLKELHVPGGAEISADGSFVVVAEFLSNRIVKYWLEGPKKGSAEFLVTIPN-PGNIKRNSDGHFWVSSSEELDGGQH----------------------------GRVVSRGIKFDGFGNILQVIPLPPPYEGEHFEQIQEHDGLLYIGSLFHSSVGILVYD 340          
BLAST of DR908648 vs. ExPASy Swiss-Prot
Match: STSY_RAUSE (Strictosidine synthase OS=Rauvolfia serpentina GN=STR1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.453e-15
Identity = 53/177 (29.94%), Postives = 82/177 (46.33%), Query Frame = 2
Query:    2 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFVLKLPISAKTHYLIHIGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVA--VYD 526
            GR++KYDP+TK+TT+LL+ L  P G  +S D SF +  E    ++ KYWL G K G  E    +P  P N++ N  G FWV                            S+      ++ GR+    +K+   G IL+V+        +   +++E DG L++G++    V   VYD
Sbjct:  187 GRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWV----------------------------SSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 334          
BLAST of DR908648 vs. ExPASy Swiss-Prot
Match: STSY_RAUMA (Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.453e-15
Identity = 53/177 (29.94%), Postives = 82/177 (46.33%), Query Frame = 2
Query:    2 GRVLKYDPTTKQTTVLLRNLQFPNGLSLSKDKSFFVFCEGSVGRLHKYWLIGEKAGNLEAFAILPGYPDNVRTNEKGEFWVAIHCRRSLYSHLMALYPKIRHFVLKLPISAKTHYLIHIGGRLHAMAVKYSPEGKILQVLEDSKGKVVKAISEVEEKDGKLWMGSVLMPFVA--VYD 526
            GR++KYDP+TK+TT+LL+ L  P G  +S D SF +  E    ++ KYWL G K G  E    +P  P N++ N  G FWV                            S+      ++ GR+    +K+   G IL+V+        +   +++E DG L++G++    V   VYD
Sbjct:  185 GRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWV----------------------------SSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 332          
The following BLAST results are available for this feature:
BLAST of DR908648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
APMAP_RAT1.149e-2031.40Adipocyte plasma membrane-associated protein OS=Ra... [more]
APMAP_MOUSE1.149e-2031.40Adipocyte plasma membrane-associated protein OS=Mu... [more]
APMAP_SALSA3.342e-2030.34Adipocyte plasma membrane-associated protein OS=Sa... [more]
APMAP_BOVIN4.364e-2031.40Adipocyte plasma membrane-associated protein OS=Bo... [more]
APMAP_DANRE1.404e-1830.34Adipocyte plasma membrane-associated protein OS=Da... [more]
APMAP_HUMAN1.834e-1830.23Adipocyte plasma membrane-associated protein OS=Ho... [more]
APMAP_CHICK6.968e-1830.94Adipocyte plasma membrane-associated protein OS=Ga... [more]
STSY_CATRO4.516e-1732.20Strictosidine synthase OS=Catharanthus roseus GN=S... [more]
STSY_RAUSE1.453e-1529.94Strictosidine synthase OS=Rauvolfia serpentina GN=... [more]
STSY_RAUMA1.453e-1529.94Strictosidine synthase (Fragment) OS=Rauvolfia man... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16776 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-54_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908648 ID=DR908648; Name=DR908648; organism=Citrus sinensis; type=EST; length=602bp
TGGTAGGGTTCTAAAGTATGATCCAACTACAAAACAGACCACTGTCCTTT
TGAGGAATCTTCAATTCCCTAATGGGCTTTCCCTGAGCAAGGACAAATCC
TTCTTTGTCTTTTGTGAAGGATCTGTTGGCAGATTACACAAGTACTGGTT
GATAGGTGAGAAAGCGGGTAATTTAGAGGCATTTGCCATCTTACCAGGAT
ATCCTGACAACGTCCGCACAAATGAAAAGGGTGAGTTTTGGGTGGCAATC
CACTGTCGGCGGAGCTTGTACTCTCATCTGATGGCTTTATACCCTAAAAT
TAGGCATTTCGTGCTCAAGCTCCCAATTTCAGCCAAGACTCATTACCTGA
TTCACATTGGGGGAAGGCTTCATGCTATGGCTGTCAAATACAGCCCAGAG
GGAAAGATTTTGCAGGTATTGGAGGACAGTAAGGGGAAGGTTGTTAAAGC
AATCAGTGAAGTTGAAGAGAAGGACGGGAAGCTGTGGATGGGCAGTGTGT
TGATGCCTTTTGTTGCAGTTTATGACTTGTCTTGAGGTAGAAGCACGTCT
ATTTATGATTAAAAGCTGTTGTTCTTTACGCTGGAGGTAGATAGATCGTT
TT
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