CN189277

Overview
NameCN189277
Unique NameCN189277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN189277 vs. ExPASy Swiss-Prot
Match: BLH9_ARATH (BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana GN=BLH9 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.973e-12
Identity = 43/79 (54.43%), Postives = 50/79 (63.29%), Query Frame = -3 
Query:  333 VGVSMAGGNSGVSLTLGLYQNNGIGLSEPYPISAAQRFGLVHETSSEGFVLSGYEAQSRIFGRDVIGG---QLLHDFVG 560
            V V  +  N GVSLTLGL+    IGL EP+P++ AQRFGL   +   G    GYE Q+R FGRD IGG   Q LHDFVG
Sbjct:  502 VPVMNSSTNGGVSLTLGLHHQ--IGLPEPFPMTTAQRFGLDGGSGDGG---GGYEGQNRQFGRDFIGGSNHQFLHDFVG 575
The following BLAST results are available for this feature:
BLAST of CN189277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BLH9_ARATH3.973e-1254.43BEL1-like homeodomain protein 9 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001J15_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189277 ID=CN189277; Name=CN189277; organism=Citrus sinensis; type=EST; length=658bp
GCCCCTTTCTTCAGGCTTTGATTCAATTGAAAACTACATTCTAAGGCCAC
ACTACCCATAATGTGTTTGGCCTCAACATGTACCAATTCTTAACCACTTA
AATAATAAATTTACAGAAAATTTTTACACCAATCATTTTATGTCATAGGC
ACCTATCAAGGGATCATATACACTGAACTTAACCTTCTTATATCCTTGGA
GCAATCATTTCGACCACTCTATTTTCGGCCTTGATTTTGGTTGTCCCCAT
AAAGCACATCAACACGAAACAGCTTTGGACATATATCCAACATTATAATG
CCCAGACACCTTGTAATCCAAAGATAAAATCAGCCAACAAAATCATGTAA
CAGCTGCCCGCCGATAACATCCCGACCAAAAATCCGACTTTGGGCTTCAT
AACCACTCAAAACAAATCCCTCACTGCTTGTCTCATGGACAAGGCCAAAT
CGTTGAGCTGCACTTATAGGATAAGGCTCTGACAAGCCAATTCCATTATT
CTGATAAAGACCTAGTGTTAAGGAAACACCACTATTTCCACCAGCCATGC
TCACACCAACACCAACATGTGGATGGTTTGATAAGCTGTTGTAAGACAAG
TTTGGTGGTTCCTCGTTGCCGACAGGTATATCAGGGAACTCATCTCTGGA
GCGTTTGG
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