DR908637
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR908637 vs. ExPASy Swiss-Prot
Match: CLCC_ARATH (Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 3.537e-54 Identity = 100/121 (82.64%), Postives = 111/121 (91.74%), Query Frame = 2 Query: 2 LVLLKGKKFTKQKTMTGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI 364 LVLL+GKKF+KQ+T GS I+R KA DF KAG GKG+K+EDLD+ EEEMEM+VDLHPITNTSPYTV+ET+SLAKAA+LFRQL LRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI Sbjct: 655 LVLLQGKKFSKQRTTFGSQILRSCKARDFGKAGLGKGLKIEDLDLSEEEMEMYVDLHPITNTSPYTVLETLSLAKAAILFRQLGLRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI 775
BLAST of DR908637 vs. ExPASy Swiss-Prot
Match: CLCG_ARATH (Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=At5g33280 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.721e-38 Identity = 71/121 (58.68%), Postives = 94/121 (77.69%), Query Frame = 2 Query: 2 LVLLKGKKFTKQKTMTGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI 364 L LLK + F S+ + +FKA +FAK GSG+ K+ED+++ EEE+ M++DLHP +N SPYTVVETMSLAKA +LFR++ +RHL V+PKT RPP+VGILTRHDFMPEH+LGL+P + Sbjct: 627 LTLLKKRVFMPSPVACDSNTLSQFKAEEFAKKGSGRSDKIEDVELSEEELNMYLDLHPFSNASPYTVVETMSLAKALILFREVGIRHLLVIPKTSNRPPVVGILTRHDFMPEHILGLHPSV 747
BLAST of DR908637 vs. ExPASy Swiss-Prot
Match: CLCA_ARATH (Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 6.733e-21 Identity = 54/127 (42.52%), Postives = 81/127 (63.78%), Query Frame = 2 Query: 8 LLKGKKFTKQKTMTGS-DIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPK--TPGRPPIVGILTRHDFMPEHVLGLYPHIVNRHK 379 +LK + F +K T ++ +F + A+ +D+ I EM+++VDLHP+TNT+PYTVV++MS+AKA VLFR + LRHL VVPK G P++GILTR D ++L +PH+ ++HK Sbjct: 649 VLKKRWFLNEKRRTEEWEVREKFTPVELAEREDN----FDDVAITSSEMQLYVDLHPLTNTTPYTVVQSMSVAKALVLFRSVGLRHLLVVPKIQASGMSPVIGILTRQDLRAYNILQAFPHL-DKHK 770
BLAST of DR908637 vs. ExPASy Swiss-Prot
Match: CLCB_ARATH (Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.700e-20 Identity = 54/120 (45.00%), Postives = 75/120 (62.50%), Query Frame = 2 Query: 8 LLKGKKFTKQKTMTGS-DIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPK--TPGRPPIVGILTRHDFMPEHVLGLYP 358 +LK + F +K T ++ +F + A+ +D+ I EMEM+VDLHP+TNT+PYTV+E MS+AKA VLFRQ+ LRHL +VPK G P+VGILTR D ++L +P Sbjct: 654 VLKKRWFLTEKRRTEEWEVREKFPWDELAEREDN----FDDVAITSAEMEMYVDLHPLTNTTPYTVMENMSVAKALVLFRQVGLRHLLIVPKIQASGMCPVVGILTRQDLRAYNILQAFP 769
BLAST of DR908637 vs. ExPASy Swiss-Prot
Match: CLCD_ARATH (Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.453e-15 Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 2 LVLLKGKKFTKQKTMTGSDIMR--RFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPE 337 LVLL+ K + + R R +FAK S KG+ +ED+ + +++EM++DL P N SPY V E MSL K LFRQL LRHL VVP+ P R ++G++TR D + E Sbjct: 643 LVLLQSKVDFQHSPLPCDPSARNIRHSFSEFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKVYNLFRQLGLRHLFVVPR-PSR--VIGLITRKDLLIE 753 The following BLAST results are available for this feature:
BLAST of DR908637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908637 ID=DR908637; Name=DR908637; organism=Citrus sinensis; type=EST; length=603bpback to top |